RNA–Protein interactions for RNA: ENST00000504522.1

SH3RF2-203, Transcript of SH3 domain containing ring finger 2, humanhuman

TSL 3

Gene SH3RF2, Length 678 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2-203ENST00000504522 PABPC4Q13310 644 aaKnown RBP eCLIP14.32□□□□□ -0.12
SH3RF2-203ENST00000504522 LBX2Q6XYB7 198 aa14.32□□□□□ -0.12
SH3RF2-203ENST00000504522 MICU3Q86XE3 530 aa14.32□□□□□ -0.12
SH3RF2-203ENST00000504522 NUP133Q8WUM0 1156 aa14.32□□□□□ -0.12
SH3RF2-203ENST00000504522 LZTS2Q9BRK4 669 aa14.32□□□□□ -0.12
SH3RF2-203ENST00000504522 GPHNQ9NQX3 736 aaPredicted RBP14.32□□□□□ -0.12
SH3RF2-203ENST00000504522 RBM27Q9P2N5 1060 aaKnown RBP14.32□□□□□ -0.12
SH3RF2-203ENST00000504522 CPA4Q9UI42 421 aa14.32□□□□□ -0.12
SH3RF2-203ENST00000504522 BRPF3Q9ULD4 1205 aa14.32□□□□□ -0.12
SH3RF2-203ENST00000504522 F5H6K3 240 aa14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 SP3Q02447 781 aa14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 KLRC3Q07444 240 aa14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 SCRN1Q12765 414 aa14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 TROAPQ12815 778 aa14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 STK3Q13188 491 aa14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 ASPRV1Q53RT3 343 aa14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 CCDC83Q8IWF9 413 aa14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 FANCBQ8NB91 859 aa14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 GMCL1P1Q8NEA9 526 aa14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 RPAP3Q9H6T3 665 aaPredicted RBP14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 GOPCQ9HD26 462 aa14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 RBPJLQ9UBG7 517 aa14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 PNMA3Q9UL41 463 aa14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 SMC3Q9UQE7 1217 aa14.31□□□□□ -0.12
SH3RF2-203ENST00000504522 PDCP20941 246 aa14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 OSBPP22059 807 aa14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 HERVK_113P62684 666 aa14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 LACTBP83111 547 aaPredicted RBP14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 ATP2B2Q01814 1243 aa14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 GRM4Q14833 912 aa14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 GPATCH4Q5T3I0 446 aaKnown RBP14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 TRIM22Q8IYM9 498 aa14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 SPICE1Q8N0Z3 855 aa14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 DCAF4Q8WV16 495 aa14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 LARP6Q9BRS8 491 aaKnown RBP14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 TXNRD2Q9NNW7 524 aa14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 MORF4L1Q9UBU8 362 aa14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 ADAMTS5Q9UNA0 930 aa14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 HPS5Q9UPZ3 1129 aa14.3□□□□□ -0.12
SH3RF2-203ENST00000504522 COL11A1P12107 1806 aaPredicted RBP14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 DOCK3Q8IZD9 2030 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 CENPFP49454 3210 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 SPDYE16A6NNV3 312 aaPredicted RBP14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 WDR46O15213 610 aaKnown RBP14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 PEX10O60683 326 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 CNMDO75829 334 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 LARGE1O95461 756 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 NDUFB10O96000 172 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 PARP1P09874 1014 aaKnown RBP14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 IFNAR1P17181 557 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 SMARCA1P28370 1054 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 GCLCP48506 637 aaPredicted RBP14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 CCT2P78371 535 aaKnown RBP14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 FAM110CQ1W6H9 321 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 NECAB1Q8N987 351 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 RGS22Q8NE09 1264 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 WASF1Q92558 559 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 GMCL1Q96IK5 515 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 ARHGAP39Q9C0H5 1083 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 SENP2Q9HC62 589 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 CIZ1Q9ULV3 898 aaPredicted RBP14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 STK36Q9NRP7 1315 aa14.29□□□□□ -0.12
SH3RF2-203ENST00000504522 SNHG28P0DPA3 235 aa14.28□□□□□ -0.12
SH3RF2-203ENST00000504522 IRX3P78415 501 aaPredicted RBP14.28□□□□□ -0.12
SH3RF2-203ENST00000504522 AKAP17AQ02040 695 aaKnown RBP14.28□□□□□ -0.12
SH3RF2-203ENST00000504522 COG2Q14746 738 aa14.28□□□□□ -0.12
SH3RF2-203ENST00000504522 Q3C1V9 767 aa14.28□□□□□ -0.12
SH3RF2-203ENST00000504522 LRRC47Q8N1G4 583 aaKnown RBP14.28□□□□□ -0.12
SH3RF2-203ENST00000504522 ANKRD13CQ8N6S4 541 aa14.28□□□□□ -0.12
SH3RF2-203ENST00000504522 FAM184AQ8NB25 1140 aa14.28□□□□□ -0.12
SH3RF2-203ENST00000504522 CD99L2Q8TCZ2 262 aa14.28□□□□□ -0.12
SH3RF2-203ENST00000504522 SMCR8Q8TEV9 937 aaPredicted RBP14.28□□□□□ -0.12
SH3RF2-203ENST00000504522 PLXNB2O15031 1838 aa14.27□□□□□ -0.12
SH3RF2-203ENST00000504522 MYPNQ86TC9 1320 aa14.27□□□□□ -0.12
SH3RF2-203ENST00000504522 PDHBP11177 359 aa14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 DSG3P32926 999 aa14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 SLC1A4P43007 532 aa14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 SSRP1Q08945 709 aaKnown RBP14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 FAM83BQ5T0W9 1011 aa14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 SLFN13Q68D06 897 aa14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 TMTC3Q6ZXV5 915 aa14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 OTOP1Q7RTM1 612 aa14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 CTU1Q7Z7A3 348 aaKnown RBP14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 SMARCC2Q8TAQ2 1214 aa14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 ERO1AQ96HE7 468 aa14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 TRIM47Q96LD4 638 aa14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 NUP88Q99567 741 aaPredicted RBP14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 MYL10Q9BUA6 226 aa14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 RNF26Q9BY78 433 aaPredicted RBP14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 FBXO28Q9NVF7 368 aa14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 HOXC10Q9NYD6 342 aa14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 BTBD7Q9P203 1132 aa14.27□□□□□ -0.13
SH3RF2-203ENST00000504522 PTPDC1A2A3K4 754 aa14.26□□□□□ -0.13
SH3RF2-203ENST00000504522 PALM3A6NDB9 673 aaPredicted RBP14.26□□□□□ -0.13
SH3RF2-203ENST00000504522 RXRAP19793 462 aa14.26□□□□□ -0.13
SH3RF2-203ENST00000504522 GJB2P29033 226 aa14.26□□□□□ -0.13
SH3RF2-203ENST00000504522 ADD1P35611 737 aaKnown RBP14.26□□□□□ -0.13
SH3RF2-203ENST00000504522 NUCB2P80303 420 aa14.26□□□□□ -0.13
SH3RF2-203ENST00000504522 CCDC96Q2M329 555 aa14.26□□□□□ -0.13
SH3RF2-203ENST00000504522 RASGRP2Q7LDG7 609 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms