RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 HIP1O00291 1037 aa21.31■■□□□ 1
SH3TC1-208ENST00000504223 RRP12Q5JTH9 1297 aaKnown RBP21.31■■□□□ 1
SH3TC1-208ENST00000504223 PRPF38AQ8NAV1 312 aaKnown RBP21.31■■□□□ 1
SH3TC1-208ENST00000504223 TRPV1Q8NER1 839 aa21.31■■□□□ 1
SH3TC1-208ENST00000504223 STAG1Q8WVM7 1258 aa21.31■■□□□ 1
SH3TC1-208ENST00000504223 STX8Q9UNK0 236 aa21.31■■□□□ 1
SH3TC1-208ENST00000504223 FRMPD3Q5JV73 1810 aa21.31■■□□□ 1
SH3TC1-208ENST00000504223 SMCHD1A6NHR9 2005 aa21.3■■□□□ 1
SH3TC1-208ENST00000504223 SLC34A2O95436 690 aa21.3■■□□□ 1
SH3TC1-208ENST00000504223 FCER1AP12319 257 aa21.3■■□□□ 1
SH3TC1-208ENST00000504223 MFAP1P55081 439 aaKnown RBP21.3■■□□□ 1
SH3TC1-208ENST00000504223 AKNAD1Q5T1N1 836 aa21.3■■□□□ 1
SH3TC1-208ENST00000504223 TEX13BQ9BXU2 312 aa21.3■■□□□ 1
SH3TC1-208ENST00000504223 TOMM22Q9NS69 142 aa21.3■■□□□ 1
SH3TC1-208ENST00000504223 PLXNA1Q9UIW2 1896 aa21.3■■□□□ 1
SH3TC1-208ENST00000504223 ATP2A1O14983 1001 aa21.29■■□□□ 1
SH3TC1-208ENST00000504223 CYBAP13498 195 aa21.29■■□□□ 1
SH3TC1-208ENST00000504223 CHMLP26374 656 aa21.29■■□□□ 1
SH3TC1-208ENST00000504223 COPB2P35606 906 aa21.29■■□□□ 1
SH3TC1-208ENST00000504223 GMCL1Q96IK5 515 aa21.29■■□□□ 1
SH3TC1-208ENST00000504223 MAML3Q96JK9 1138 aa21.29■■□□□ 1
SH3TC1-208ENST00000504223 DSCC1Q9BVC3 393 aa21.29■■□□□ 1
SH3TC1-208ENST00000504223 SLC5A4Q9NY91 659 aa21.29■■□□□ 1
SH3TC1-208ENST00000504223 FEM1BQ9UK73 627 aa21.29■■□□□ 1
SH3TC1-208ENST00000504223 RIPK3Q9Y572 518 aa21.29■■□□□ 1
SH3TC1-208ENST00000504223 ALPK3Q96L96 1907 aa21.28■■□□□ 1
SH3TC1-208ENST00000504223 BMP3P12645 472 aa21.28■■□□□ 1
SH3TC1-208ENST00000504223 MCCP23508 829 aa21.28■■□□□ 1
SH3TC1-208ENST00000504223 PPP4R3BQ5MIZ7 849 aa21.28■■□□□ 1
SH3TC1-208ENST00000504223 RCSD1Q6JBY9 416 aa21.28■■□□□ 1
SH3TC1-208ENST00000504223 KIFC2Q96AC6 838 aa21.28■■□□□ 1
SH3TC1-208ENST00000504223 MMP19Q99542 508 aa21.28■■□□□ 1
SH3TC1-208ENST00000504223 C11orf49Q9H6J7 331 aa21.28■■□□□ 1
SH3TC1-208ENST00000504223 SLC38A10Q9HBR0 1119 aa21.28■■□□□ 1
SH3TC1-208ENST00000504223 DDX20Q9UHI6 824 aaKnown RBP21.28■■□□□ 1
SH3TC1-208ENST00000504223 PGK2P07205 417 aa21.27■■□□□ 1
SH3TC1-208ENST00000504223 COL6A1P12109 1028 aa21.27■■□□□ 1
SH3TC1-208ENST00000504223 KCTD2Q14681 263 aa21.27■■□□□ 1
SH3TC1-208ENST00000504223 HABP4Q5JVS0 413 aaKnown RBP21.27■■□□□ 1
SH3TC1-208ENST00000504223 SNRNP48Q6IEG0 339 aaKnown RBP21.27■■□□□ 1
SH3TC1-208ENST00000504223 MFSD6Q6ZSS7 791 aa21.27■■□□□ 1
SH3TC1-208ENST00000504223 TCP11L1Q9NUJ3 509 aa21.27■■□□□ 1
SH3TC1-208ENST00000504223 COLQQ9Y215 455 aaPredicted RBP21.27■■□□□ 1
SH3TC1-208ENST00000504223 PFASO15067 1338 aa21.27■□□□□ 0.99
SH3TC1-208ENST00000504223 TMEM232C9JQI7 657 aa21.26■□□□□ 0.99
SH3TC1-208ENST00000504223 ZNF792Q3KQV3 632 aa21.26■□□□□ 0.99
SH3TC1-208ENST00000504223 KCTD1Q719H9 257 aa21.26■□□□□ 0.99
SH3TC1-208ENST00000504223 TMEM47Q9BQJ4 181 aa21.26■□□□□ 0.99
SH3TC1-208ENST00000504223 NR2E3Q9Y5X4 410 aa21.26■□□□□ 0.99
SH3TC1-208ENST00000504223 ZNF213O14771 459 aa21.25■□□□□ 0.99
SH3TC1-208ENST00000504223 EVI5O60447 810 aa21.25■□□□□ 0.99
SH3TC1-208ENST00000504223 MSCO60682 206 aa21.25■□□□□ 0.99
SH3TC1-208ENST00000504223 ZBED4O75132 1171 aa21.25■□□□□ 0.99
SH3TC1-208ENST00000504223 CNGA1P29973 690 aa21.25■□□□□ 0.99
SH3TC1-208ENST00000504223 SLC1A4P43007 532 aa21.25■□□□□ 0.99
SH3TC1-208ENST00000504223 PTH1RQ03431 593 aa21.25■□□□□ 0.99
SH3TC1-208ENST00000504223 CPXCR1Q8N123 301 aa21.25■□□□□ 0.99
SH3TC1-208ENST00000504223 RAVER2Q9HCJ3 691 aaKnown RBP21.25■□□□□ 0.99
SH3TC1-208ENST00000504223 MTMR7Q9Y216 660 aa21.25■□□□□ 0.99
SH3TC1-208ENST00000504223 DIS3Q9Y2L1 958 aaKnown RBP21.25■□□□□ 0.99
SH3TC1-208ENST00000504223 RAD50Q92878 1312 aa21.25■□□□□ 0.99
SH3TC1-208ENST00000504223 PCP11498 1178 aaKnown RBP21.24■□□□□ 0.99
SH3TC1-208ENST00000504223 STAT2P52630 851 aa21.24■□□□□ 0.99
SH3TC1-208ENST00000504223 OAZ1P54368 228 aa21.24■□□□□ 0.99
SH3TC1-208ENST00000504223 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.24■□□□□ 0.99
SH3TC1-208ENST00000504223 ZKSCAN3Q9BRR0 538 aa21.24■□□□□ 0.99
SH3TC1-208ENST00000504223 MCM3APO60318 1980 aa21.23■□□□□ 0.99
SH3TC1-208ENST00000504223 PLA2G6O60733 806 aa21.23■□□□□ 0.99
SH3TC1-208ENST00000504223 TOP1P11387 765 aaKnown RBP21.23■□□□□ 0.99
SH3TC1-208ENST00000504223 SNAP25P60880 206 aa21.23■□□□□ 0.99
SH3TC1-208ENST00000504223 PRAMEF19Q5SWL8 479 aa21.23■□□□□ 0.99
SH3TC1-208ENST00000504223 TTBK2Q6IQ55 1244 aa21.23■□□□□ 0.99
SH3TC1-208ENST00000504223 RNF41Q9H4P4 317 aaPredicted RBP21.23■□□□□ 0.99
SH3TC1-208ENST00000504223 ISY1Q9ULR0 285 aaKnown RBP21.23■□□□□ 0.99
SH3TC1-208ENST00000504223 ZNF536O15090 1300 aa21.23■□□□□ 0.99
SH3TC1-208ENST00000504223 DNAJC25-GNG10A0A024R161 153 aa21.22■□□□□ 0.99
SH3TC1-208ENST00000504223 B4E1Z4 1266 aa21.22■□□□□ 0.99
SH3TC1-208ENST00000504223 SGSM2O43147 1006 aa21.22■□□□□ 0.99
SH3TC1-208ENST00000504223 SEPT4O43236 478 aa21.22■□□□□ 0.99
SH3TC1-208ENST00000504223 KDM4AO75164 1064 aa21.22■□□□□ 0.99
SH3TC1-208ENST00000504223 FDX1P10109 184 aa21.22■□□□□ 0.99
SH3TC1-208ENST00000504223 TAL1P17542 331 aaPredicted RBP21.22■□□□□ 0.99
SH3TC1-208ENST00000504223 CHRDL2Q6WN34 429 aa21.22■□□□□ 0.99
SH3TC1-208ENST00000504223 CENPQQ7L2Z9 268 aaPredicted RBP21.22■□□□□ 0.99
SH3TC1-208ENST00000504223 FAM160B2Q86V87 743 aa21.22■□□□□ 0.99
SH3TC1-208ENST00000504223 TINF2Q9BSI4 451 aa21.22■□□□□ 0.99
SH3TC1-208ENST00000504223 PRO3102Q9H379 93 aa21.22■□□□□ 0.99
SH3TC1-208ENST00000504223 TAF6LQ9Y6J9 622 aa21.22■□□□□ 0.99
SH3TC1-208ENST00000504223 SLC4A3P48751 1232 aa21.21■□□□□ 0.99
SH3TC1-208ENST00000504223 IMMTQ16891 758 aaKnown RBP21.21■□□□□ 0.99
SH3TC1-208ENST00000504223 CHURC1Q8WUH1 139 aa21.21■□□□□ 0.99
SH3TC1-208ENST00000504223 ESR2Q92731 530 aa21.21■□□□□ 0.99
SH3TC1-208ENST00000504223 NRBP1Q9UHY1 535 aa21.21■□□□□ 0.99
SH3TC1-208ENST00000504223 PRR12Q9ULL5 1215 aa21.21■□□□□ 0.99
SH3TC1-208ENST00000504223 CTDP1Q9Y5B0 961 aaPredicted RBP21.21■□□□□ 0.99
SH3TC1-208ENST00000504223 PDHBP11177 359 aa21.2■□□□□ 0.98
SH3TC1-208ENST00000504223 CCDC96Q2M329 555 aa21.2■□□□□ 0.98
SH3TC1-208ENST00000504223 CHST13Q8NET6 341 aa21.2■□□□□ 0.98
SH3TC1-208ENST00000504223 DCAF4Q8WV16 495 aa21.2■□□□□ 0.98
SH3TC1-208ENST00000504223 AGBL1Q96MI9 1066 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms