RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 XRCC5P13010 732 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 PIK3CAP42336 1068 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 PAK2Q13177 524 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 ME3Q16798 604 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 PLA2G4DQ86XP0 818 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 SULF1Q8IWU6 871 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 CCPG1Q9ULG6 757 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 H0YCG3 227 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 PCCAP05165 728 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 OSBPP22059 807 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 ABCB5Q2M3G0 1257 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 BSPRYQ5W0U4 402 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 CCDC62Q6P9F0 684 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 CROCCP2Q86T23 111 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 GOLGA5Q8TBA6 731 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 EDC3Q96F86 508 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 ZNF274Q96GC6 653 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 CARD6Q9BX69 1037 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 PARP2Q9UGN5 583 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 BLMP54132 1417 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 CAPN9O14815 690 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 OR52Z1P0C646 297 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 POLGP54098 1239 aaPredicted RBP7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 MAP7Q14244 749 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 NEK8Q86SG6 692 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 ADPGKQ9BRR6 497 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 IFIH1Q9BYX4 1025 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 NLRC4Q9NPP4 1024 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 DTNBO60941 627 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 CRKLP46109 303 aaKnown RBP7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 ATP10DQ9P241 1426 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 CEP170Q5SW79 1584 aa7.91□□□□□ -1.14
SYNPO2-205ENST00000504178 TMEM232C9JQI7 657 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 PFKFB1P16118 471 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 SARNPP82979 210 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 SATB1Q01826 763 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 LRRC24Q50LG9 513 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 B4GALNT4Q76KP1 1039 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 CNKSR1Q969H4 720 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 C1orf112Q9NSG2 853 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 NRBP2Q9NSY0 501 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 ZNF804BA4D1E1 1349 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 A0A0D9SFI3 127 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 PDE6AP16499 860 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 HADHQ16836 314 aaKnown RBP7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 DENND2CQ68D51 928 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 GALNT17Q6IS24 598 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 KRBA2Q6ZNG9 492 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 KRT26Q7Z3Y9 468 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 NOSTRINQ8IVI9 506 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 PNMA1Q8ND90 353 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 GRK7Q8WTQ7 553 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 SCG2P13521 617 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 KRT15P19012 456 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 U2AF2P26368 475 aaKnown RBP eCLIP7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 SLFN13Q68D06 897 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 SDCCAG8Q86SQ7 713 aaPredicted RBP7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 PALM2Q8IXS6 379 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 KRT12Q99456 494 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 ANKFY1Q9P2R3 1169 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 TNKSO95271 1327 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 SSH2Q76I76 1423 aa7.9□□□□□ -1.14
SYNPO2-205ENST00000504178 SEPT14Q6ZU15 432 aa7.9□□□□□ -1.15
SYNPO2-205ENST00000504178 RAB17Q9H0T7 212 aa7.9□□□□□ -1.15
SYNPO2-205ENST00000504178 PCDHA12Q9UN75 941 aa7.9□□□□□ -1.15
SYNPO2-205ENST00000504178 XDHP47989 1333 aa7.9□□□□□ -1.15
SYNPO2-205ENST00000504178 KLRF2D3W0D1 207 aa7.9□□□□□ -1.15
SYNPO2-205ENST00000504178 PTH1RQ03431 593 aa7.9□□□□□ -1.15
SYNPO2-205ENST00000504178 RUFY4Q6ZNE9 571 aa7.9□□□□□ -1.15
SYNPO2-205ENST00000504178 CCDC84Q86UT8 332 aaPredicted RBP7.9□□□□□ -1.15
SYNPO2-205ENST00000504178 RSRC1Q96IZ7 334 aaKnown RBP7.9□□□□□ -1.15
SYNPO2-205ENST00000504178 PNMA2Q9UL42 364 aa7.9□□□□□ -1.15
SYNPO2-205ENST00000504178 ARHGAP6O43182 974 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 ABCB4P21439 1286 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 TFDP1Q14186 410 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 GBP6Q6ZN66 633 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 SUGCTQ9HAC7 445 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 SEPT9Q9UHD8 586 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 PTPRTO14522 1441 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 STAT1P42224 750 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 CACNA2D3Q8IZS8 1091 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 FANCBQ8NB91 859 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 NBPF3Q9H094 633 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 PLEKHA4Q9H4M7 779 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 QTRT2Q9H974 415 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 ABCC4O15439 1325 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 PFKFB2O60825 505 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 ADKP55263 362 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 PPARDQ03181 441 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 ARMCX5Q6P1M9 558 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 P3H4Q92791 437 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 ARHGEF2Q92974 986 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 MCUR1Q96AQ8 359 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 GREM2Q9H772 168 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 DISP1Q96F81 1524 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 PLEKHG3A1L390 1219 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 SPDYE16A6NNV3 312 aaPredicted RBP7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 TLR3O15455 904 aaKnown RBP7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 TMEM191BP0C7N4 346 aa7.89□□□□□ -1.15
SYNPO2-205ENST00000504178 HSPD1P10809 573 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms