RNA–Protein interactions for RNA: ENST00000504168.5

TSPAN17-205, Transcript of tetraspanin 17, humanhuman

TSL 5

Gene TSPAN17, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-205ENST00000504168 COPB2P35606 906 aa28.25■■■□□ 2.11
TSPAN17-205ENST00000504168 MNX1P50219 401 aaPredicted RBP28.25■■■□□ 2.11
TSPAN17-205ENST00000504168 RRP12Q5JTH9 1297 aaKnown RBP28.25■■■□□ 2.11
TSPAN17-205ENST00000504168 OLFML2BQ68BL8 750 aa28.25■■■□□ 2.11
TSPAN17-205ENST00000504168 PAWRQ96IZ0 340 aaKnown RBP28.25■■■□□ 2.11
TSPAN17-205ENST00000504168 HTATIP2Q9BUP3 242 aa28.25■■■□□ 2.11
TSPAN17-205ENST00000504168 TEX13BQ9BXU2 312 aa28.25■■■□□ 2.11
TSPAN17-205ENST00000504168 AKNAD1Q5T1N1 836 aa28.24■■■□□ 2.11
TSPAN17-205ENST00000504168 LHX8Q68G74 356 aa28.24■■■□□ 2.11
TSPAN17-205ENST00000504168 SNRNP48Q6IEG0 339 aaKnown RBP28.24■■■□□ 2.11
TSPAN17-205ENST00000504168 STAG1Q8WVM7 1258 aa28.24■■■□□ 2.11
TSPAN17-205ENST00000504168 MMP19Q99542 508 aa28.24■■■□□ 2.11
TSPAN17-205ENST00000504168 IL25Q9H293 177 aa28.24■■■□□ 2.11
TSPAN17-205ENST00000504168 SLC38A10Q9HBR0 1119 aa28.24■■■□□ 2.11
TSPAN17-205ENST00000504168 ATP2A1O14983 1001 aa28.23■■■□□ 2.11
TSPAN17-205ENST00000504168 ZBED4O75132 1171 aa28.23■■■□□ 2.11
TSPAN17-205ENST00000504168 RASGRP2Q7LDG7 609 aa28.23■■■□□ 2.11
TSPAN17-205ENST00000504168 TRPV1Q8NER1 839 aa28.23■■■□□ 2.11
TSPAN17-205ENST00000504168 CHMP4CQ96CF2 233 aa28.23■■■□□ 2.11
TSPAN17-205ENST00000504168 SLC5A4Q9NY91 659 aa28.23■■■□□ 2.11
TSPAN17-205ENST00000504168 RIPK3Q9Y572 518 aa28.23■■■□□ 2.11
TSPAN17-205ENST00000504168 TMEM232C9JQI7 657 aa28.22■■■□□ 2.11
TSPAN17-205ENST00000504168 PCP11498 1178 aaKnown RBP28.22■■■□□ 2.11
TSPAN17-205ENST00000504168 MCCP23508 829 aa28.22■■■□□ 2.11
TSPAN17-205ENST00000504168 SLC1A4P43007 532 aa28.22■■■□□ 2.11
TSPAN17-205ENST00000504168 MFSD6Q6ZSS7 791 aa28.22■■■□□ 2.11
TSPAN17-205ENST00000504168 DPF3Q92784 378 aa28.22■■■□□ 2.11
TSPAN17-205ENST00000504168 MAML3Q96JK9 1138 aa28.22■■■□□ 2.11
TSPAN17-205ENST00000504168 DSCC1Q9BVC3 393 aa28.22■■■□□ 2.11
TSPAN17-205ENST00000504168 TCP11L1Q9NUJ3 509 aa28.22■■■□□ 2.11
TSPAN17-205ENST00000504168 CYBAP13498 195 aa28.21■■■□□ 2.11
TSPAN17-205ENST00000504168 NECAB2Q7Z6G3 386 aa28.21■■■□□ 2.11
TSPAN17-205ENST00000504168 CPXCR1Q8N123 301 aa28.21■■■□□ 2.11
TSPAN17-205ENST00000504168 RAVER2Q9HCJ3 691 aaKnown RBP28.21■■■□□ 2.11
TSPAN17-205ENST00000504168 ISY1Q9ULR0 285 aaKnown RBP28.21■■■□□ 2.11
TSPAN17-205ENST00000504168 NEDD4P46934 1319 aa28.2■■■□□ 2.11
TSPAN17-205ENST00000504168 PGK2P07205 417 aa28.2■■■□□ 2.1
TSPAN17-205ENST00000504168 STAT2P52630 851 aa28.2■■■□□ 2.1
TSPAN17-205ENST00000504168 KCTD2Q14681 263 aa28.2■■■□□ 2.1
TSPAN17-205ENST00000504168 KCTD1Q719H9 257 aa28.2■■■□□ 2.1
TSPAN17-205ENST00000504168 FAM160B2Q86V87 743 aa28.2■■■□□ 2.1
TSPAN17-205ENST00000504168 RNF41Q9H4P4 317 aaPredicted RBP28.2■■■□□ 2.1
TSPAN17-205ENST00000504168 CTDP1Q9Y5B0 961 aaPredicted RBP28.2■■■□□ 2.1
TSPAN17-205ENST00000504168 SMCHD1A6NHR9 2005 aa28.19■■■□□ 2.1
TSPAN17-205ENST00000504168 H0YGN5 161 aa28.19■■■□□ 2.1
TSPAN17-205ENST00000504168 ZNF213O14771 459 aa28.19■■■□□ 2.1
TSPAN17-205ENST00000504168 ZNF792Q3KQV3 632 aa28.19■■■□□ 2.1
TSPAN17-205ENST00000504168 RCSD1Q6JBY9 416 aa28.19■■■□□ 2.1
TSPAN17-205ENST00000504168 PLA2G6O60733 806 aa28.18■■■□□ 2.1
TSPAN17-205ENST00000504168 TOP1P11387 765 aaKnown RBP28.18■■■□□ 2.1
TSPAN17-205ENST00000504168 OAZ1P54368 228 aa28.18■■■□□ 2.1
TSPAN17-205ENST00000504168 CHURC1Q8WUH1 139 aa28.18■■■□□ 2.1
TSPAN17-205ENST00000504168 TMEM47Q9BQJ4 181 aa28.18■■■□□ 2.1
TSPAN17-205ENST00000504168 DDX20Q9UHI6 824 aaKnown RBP28.18■■■□□ 2.1
TSPAN17-205ENST00000504168 MTMR7Q9Y216 660 aa28.18■■■□□ 2.1
TSPAN17-205ENST00000504168 MCM3APO60318 1980 aa28.17■■■□□ 2.1
TSPAN17-205ENST00000504168 FDX1P10109 184 aa28.17■■■□□ 2.1
TSPAN17-205ENST00000504168 CNGA1P29973 690 aa28.17■■■□□ 2.1
TSPAN17-205ENST00000504168 SLC4A3P48751 1232 aa28.17■■■□□ 2.1
TSPAN17-205ENST00000504168 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.17■■■□□ 2.1
TSPAN17-205ENST00000504168 DIS3Q9Y2L1 958 aaKnown RBP28.17■■■□□ 2.1
TSPAN17-205ENST00000504168 RAD50Q92878 1312 aa28.17■■■□□ 2.1
TSPAN17-205ENST00000504168 IKQ13123 557 aaPredicted RBP28.16■■■□□ 2.1
TSPAN17-205ENST00000504168 DCAF4Q8WV16 495 aa28.16■■■□□ 2.1
TSPAN17-205ENST00000504168 ESR2Q92731 530 aa28.16■■■□□ 2.1
TSPAN17-205ENST00000504168 C11orf49Q9H6J7 331 aa28.16■■■□□ 2.1
TSPAN17-205ENST00000504168 ZNF536O15090 1300 aa28.16■■■□□ 2.1
TSPAN17-205ENST00000504168 MSCO60682 206 aa28.15■■■□□ 2.1
TSPAN17-205ENST00000504168 CHMLP26374 656 aa28.15■■■□□ 2.1
TSPAN17-205ENST00000504168 PFASO15067 1338 aa28.15■■■□□ 2.1
TSPAN17-205ENST00000504168 DNAJC25-GNG10A0A024R161 153 aa28.14■■■□□ 2.1
TSPAN17-205ENST00000504168 CCDC96Q2M329 555 aa28.14■■■□□ 2.1
TSPAN17-205ENST00000504168 PRAMEF19Q5SWL8 479 aa28.14■■■□□ 2.1
TSPAN17-205ENST00000504168 TTC14Q96N46 770 aa28.14■■■□□ 2.1
TSPAN17-205ENST00000504168 PRR12Q9ULL5 1215 aa28.14■■■□□ 2.1
TSPAN17-205ENST00000504168 COL6A1P12109 1028 aa28.13■■■□□ 2.09
TSPAN17-205ENST00000504168 IMMTQ16891 758 aaKnown RBP28.13■■■□□ 2.09
TSPAN17-205ENST00000504168 CHST13Q8NET6 341 aa28.13■■■□□ 2.09
TSPAN17-205ENST00000504168 TINF2Q9BSI4 451 aa28.13■■■□□ 2.09
TSPAN17-205ENST00000504168 FBXO40Q9UH90 709 aa28.13■■■□□ 2.09
TSPAN17-205ENST00000504168 CTNNA3Q9UI47 895 aa28.13■■■□□ 2.09
TSPAN17-205ENST00000504168 SEPT4O43236 478 aa28.12■■■□□ 2.09
TSPAN17-205ENST00000504168 NT5C2P49902 561 aa28.12■■■□□ 2.09
TSPAN17-205ENST00000504168 TTBK2Q6IQ55 1244 aa28.12■■■□□ 2.09
TSPAN17-205ENST00000504168 DDX11Q96FC9 970 aa28.12■■■□□ 2.09
TSPAN17-205ENST00000504168 AGBL1Q96MI9 1066 aa28.12■■■□□ 2.09
TSPAN17-205ENST00000504168 ZKSCAN3Q9BRR0 538 aa28.12■■■□□ 2.09
TSPAN17-205ENST00000504168 NR2E3Q9Y5X4 410 aa28.12■■■□□ 2.09
TSPAN17-205ENST00000504168 B4E1Z4 1266 aa28.11■■■□□ 2.09
TSPAN17-205ENST00000504168 EVI5O60447 810 aa28.11■■■□□ 2.09
TSPAN17-205ENST00000504168 KDM4AO75164 1064 aa28.11■■■□□ 2.09
TSPAN17-205ENST00000504168 PDHBP11177 359 aa28.11■■■□□ 2.09
TSPAN17-205ENST00000504168 SNAP25P60880 206 aa28.11■■■□□ 2.09
TSPAN17-205ENST00000504168 BTNL9Q6UXG8 535 aa28.11■■■□□ 2.09
TSPAN17-205ENST00000504168 HOMER2Q9NSB8 354 aa28.11■■■□□ 2.09
TSPAN17-205ENST00000504168 NRBP1Q9UHY1 535 aa28.11■■■□□ 2.09
TSPAN17-205ENST00000504168 LCTP09848 1927 aa28.1■■■□□ 2.09
TSPAN17-205ENST00000504168 ANO1Q5XXA6 986 aa28.1■■■□□ 2.09
TSPAN17-205ENST00000504168 CCDC174Q6PII3 467 aa28.1■■■□□ 2.09
TSPAN17-205ENST00000504168 RUFY2Q8WXA3 655 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms