RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 SLBPQ14493 270 aaKnown RBP eCLIP6.64□□□□□ -1.35
SCLT1-206ENST00000503565 FNDC3BQ53EP0 1204 aaKnown RBP6.64□□□□□ -1.35
SCLT1-206ENST00000503565 BRDTQ58F21 947 aaPredicted RBP6.64□□□□□ -1.35
SCLT1-206ENST00000503565 ZNF765Q7L2R6 523 aa6.64□□□□□ -1.35
SCLT1-206ENST00000503565 ZNF227Q86WZ6 799 aa6.64□□□□□ -1.35
SCLT1-206ENST00000503565 ZNF507Q8TCN5 953 aa6.64□□□□□ -1.35
SCLT1-206ENST00000503565 CDC6Q99741 560 aa6.64□□□□□ -1.35
SCLT1-206ENST00000503565 APBA2Q99767 749 aa6.64□□□□□ -1.35
SCLT1-206ENST00000503565 AARSD1Q9BTE6 412 aaKnown RBP6.64□□□□□ -1.35
SCLT1-206ENST00000503565 PICK1Q9NRD5 415 aa6.64□□□□□ -1.35
SCLT1-206ENST00000503565 FAN1Q9Y2M0 1017 aa6.64□□□□□ -1.35
SCLT1-206ENST00000503565 U3KQE9 123 aa6.64□□□□□ -1.35
SCLT1-206ENST00000503565 FAM83GA6ND36 823 aa6.63□□□□□ -1.35
SCLT1-206ENST00000503565 TBX1O43435 398 aa6.63□□□□□ -1.35
SCLT1-206ENST00000503565 RNGTTO60942 597 aaKnown RBP6.63□□□□□ -1.35
SCLT1-206ENST00000503565 LEFTY1O75610 366 aa6.63□□□□□ -1.35
SCLT1-206ENST00000503565 SPINK2P20155 84 aa6.63□□□□□ -1.35
SCLT1-206ENST00000503565 HSP90AA2PQ14568 343 aaPredicted RBP6.63□□□□□ -1.35
SCLT1-206ENST00000503565 DCAF15Q66K64 600 aa6.63□□□□□ -1.35
SCLT1-206ENST00000503565 RAVER1Q8IY67 606 aaKnown RBP6.63□□□□□ -1.35
SCLT1-206ENST00000503565 CCDC74BQ96LY2 380 aa6.63□□□□□ -1.35
SCLT1-206ENST00000503565 FGD4Q96M96 766 aa6.63□□□□□ -1.35
SCLT1-206ENST00000503565 TARS2Q9BW92 718 aaKnown RBP6.63□□□□□ -1.35
SCLT1-206ENST00000503565 PIM2Q9P1W9 311 aa6.63□□□□□ -1.35
SCLT1-206ENST00000503565 COBLO75128 1261 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 CLEC3AO75596 197 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 NAT2P11245 290 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 SOX5P35711 763 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 NFKB2Q00653 900 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 EXOSC10Q01780 885 aaKnown RBP6.62□□□□□ -1.35
SCLT1-206ENST00000503565 MSMPQ1L6U9 139 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 PRAMEF13Q5VWM6 474 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 HEATR6Q6AI08 1181 aaKnown RBP6.62□□□□□ -1.35
SCLT1-206ENST00000503565 OGFOD3Q6PK18 319 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 NFXL1Q6ZNB6 911 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 FMNL3Q8IVF7 1028 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 SCUBE1Q8IWY4 988 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 AFAP1L2Q8N4X5 818 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 LRRN4CLQ8ND94 238 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 CYB5D2Q8WUJ1 264 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 OSBP2Q969R2 916 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 ZNF512BQ96KM6 892 aaPredicted RBP6.62□□□□□ -1.35
SCLT1-206ENST00000503565 POLR3GLQ9BT43 218 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 MRPL4Q9BYD3 311 aaKnown RBP6.62□□□□□ -1.35
SCLT1-206ENST00000503565 PIDD1Q9HB75 910 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 PCOLCE2Q9UKZ9 415 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 MAPRE3Q9UPY8 281 aa6.62□□□□□ -1.35
SCLT1-206ENST00000503565 SHOXO15266 292 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 CST3P01034 146 aaPredicted RBP6.61□□□□□ -1.35
SCLT1-206ENST00000503565 FGFR1P11362 822 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 PABPC1P11940 636 aaKnown RBP6.61□□□□□ -1.35
SCLT1-206ENST00000503565 FOSL1P15407 271 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 GBP1P32455 592 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 CAP2P40123 477 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 FAM50AQ14320 339 aaKnown RBP6.61□□□□□ -1.35
SCLT1-206ENST00000503565 HSP90AB2PQ58FF8 381 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 FAM214BQ7L5A3 538 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 STRA8Q7Z7C7 330 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 LRRTM3Q86VH5 581 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 DTX1Q86Y01 620 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 PPP1R13LQ8WUF5 828 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 SMARCC1Q92922 1105 aaPredicted RBP6.61□□□□□ -1.35
SCLT1-206ENST00000503565 OSBPL1AQ9BXW6 950 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 ATG3Q9NT62 314 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 LRP2BPQ9P2M1 347 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 ZNF451Q9Y4E5 1061 aa6.61□□□□□ -1.35
SCLT1-206ENST00000503565 COL17A1Q9UMD9 1497 aaPredicted RBP6.6□□□□□ -1.35
SCLT1-206ENST00000503565 PRODHO43272 600 aa6.6□□□□□ -1.35
SCLT1-206ENST00000503565 DNAJC8O75937 253 aaPredicted RBP6.6□□□□□ -1.35
SCLT1-206ENST00000503565 C6orf222P0C671 652 aaPredicted RBP6.6□□□□□ -1.35
SCLT1-206ENST00000503565 SUMO1P63165 101 aaKnown RBP6.6□□□□□ -1.35
SCLT1-206ENST00000503565 CT47A1Q5JQC4 288 aaPredicted RBP6.6□□□□□ -1.35
SCLT1-206ENST00000503565 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.6□□□□□ -1.35
SCLT1-206ENST00000503565 CCDC144CPQ8IYA2 1237 aa6.6□□□□□ -1.35
SCLT1-206ENST00000503565 PPP1R14AQ96A00 147 aa6.6□□□□□ -1.35
SCLT1-206ENST00000503565 MRGPRX3Q96LB0 322 aa6.6□□□□□ -1.35
SCLT1-206ENST00000503565 CEP89Q96ST8 783 aa6.6□□□□□ -1.35
SCLT1-206ENST00000503565 DUSP23Q9BVJ7 150 aa6.6□□□□□ -1.35
SCLT1-206ENST00000503565 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.6□□□□□ -1.35
SCLT1-206ENST00000503565 TRIM39Q9HCM9 518 aa6.6□□□□□ -1.35
SCLT1-206ENST00000503565 EID1Q9Y6B2 187 aa6.6□□□□□ -1.35
SCLT1-206ENST00000503565 DNAJC25-GNG10A0A024R161 153 aa6.59□□□□□ -1.35
SCLT1-206ENST00000503565 EYA4O95677 639 aa6.59□□□□□ -1.35
SCLT1-206ENST00000503565 FAM87AP0C7U9 286 aa6.59□□□□□ -1.35
SCLT1-206ENST00000503565 TRIM61Q5EBN2 209 aa6.59□□□□□ -1.35
SCLT1-206ENST00000503565 CNNM4Q6P4Q7 775 aa6.59□□□□□ -1.35
SCLT1-206ENST00000503565 INTS5Q6P9B9 1019 aaKnown RBP6.59□□□□□ -1.35
SCLT1-206ENST00000503565 NSMFQ6X4W1 530 aa6.59□□□□□ -1.35
SCLT1-206ENST00000503565 SLC7A14Q8TBB6 771 aa6.59□□□□□ -1.35
SCLT1-206ENST00000503565 XAGE3Q8WTP9 111 aa6.59□□□□□ -1.35
SCLT1-206ENST00000503565 IPO9Q96P70 1041 aaKnown RBP6.59□□□□□ -1.35
SCLT1-206ENST00000503565 PCMTD2Q9NV79 361 aa6.59□□□□□ -1.35
SCLT1-206ENST00000503565 INTS7Q9NVH2 962 aaKnown RBP6.59□□□□□ -1.35
SCLT1-206ENST00000503565 MAGEC2Q9UBF1 373 aaPredicted RBP6.59□□□□□ -1.35
SCLT1-206ENST00000503565 ZC3H7BQ9UGR2 993 aaKnown RBP6.59□□□□□ -1.35
SCLT1-206ENST00000503565 MCM8Q9UJA3 840 aa6.59□□□□□ -1.35
SCLT1-206ENST00000503565 CNTNAP4Q9C0A0 1308 aa6.58□□□□□ -1.36
SCLT1-206ENST00000503565 WASHC2CQ9Y4E1 1318 aa6.58□□□□□ -1.36
SCLT1-206ENST00000503565 PMLP29590 882 aa6.58□□□□□ -1.36
SCLT1-206ENST00000503565 CPSF6Q16630 551 aaKnown RBP eCLIP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms