RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 AK8Q96MA6 479 aa8.16□□□□□ -1.1
LYSMD3-203ENST00000500869 ARID3AQ99856 593 aa8.16□□□□□ -1.1
LYSMD3-203ENST00000500869 RPN1P04843 607 aaKnown RBP8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 FXR1P51114 621 aaKnown RBP eCLIP8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 MECOMQ03112 1051 aa8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 C3orf67Q6ZVT6 689 aa8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 RETREG2Q8NC44 543 aa8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 PARD6BQ9BYG5 372 aa8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 NYXQ9GZU5 481 aa8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 DISC1Q9NRI5 854 aa8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 KIF5CO60282 957 aa8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 RPS6KA5O75582 802 aa8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 MTF1Q14872 753 aa8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 ERFEQ4G0M1 354 aa8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 ARHGAP27Q6ZUM4 889 aa8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 ZSCAN29Q8IWY8 852 aaPredicted RBP8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 BLIDQ8IZY5 108 aa8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 GIMAP8Q8ND71 665 aaPredicted RBP8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 CAPN11Q9UMQ6 739 aa8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 CTNND2Q9UQB3 1225 aa8.15□□□□□ -1.1
LYSMD3-203ENST00000500869 GYG1P46976 350 aa8.15□□□□□ -1.11
LYSMD3-203ENST00000500869 BEND6Q5SZJ8 279 aaPredicted RBP8.15□□□□□ -1.11
LYSMD3-203ENST00000500869 C12orf60Q5U649 245 aa8.15□□□□□ -1.11
LYSMD3-203ENST00000500869 CMTR1Q8N1G2 835 aaKnown RBP8.15□□□□□ -1.11
LYSMD3-203ENST00000500869 SPZ1Q9BXG8 430 aa8.15□□□□□ -1.11
LYSMD3-203ENST00000500869 UBR3Q6ZT12 1888 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 ESYT2A0FGR8 921 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 KCNJ18B7U540 433 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 hCG_1984214I3L0E3 225 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 HNRNPH3P31942 346 aaKnown RBP8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 CASP14P31944 242 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 CHMP4BP1P59074 171 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 KCNJ12Q14500 433 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 DDB1Q16531 1140 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 NOM1Q5C9Z4 860 aaKnown RBP8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 PAPD7Q5XG87 772 aaKnown RBP8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 SPTY2D1Q68D10 685 aaPredicted RBP8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 ZNF713Q8N859 430 aaPredicted RBP8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 CCDC148Q8NFR7 591 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 DHTKD1Q96HY7 919 aaPredicted RBP8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 VIPAS39Q9H9C1 493 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 ARFGAP3Q9NP61 516 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 MAD2L2Q9UI95 211 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 FAM205AQ6ZU69 1335 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 PALM3A6NDB9 673 aaPredicted RBP8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 SMIM22K7EJ46 135 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 PRDM1O75626 825 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 TTI2Q6NXR4 508 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 TRAPPC11Q7Z392 1133 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 NELFBQ8WX92 580 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 RPGRIP1Q96KN7 1286 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 NAPGQ99747 312 aaPredicted RBP8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 ZHX1Q9UKY1 873 aaPredicted RBP8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 REXO2Q9Y3B8 237 aaKnown RBP8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 NRXN2Q9P2S2 1712 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 MYH7BA7E2Y1 1941 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 ARFGEF1Q9Y6D6 1849 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 TARSL2A2RTX5 802 aaKnown RBP8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 MINDY4BA8MYZ0 360 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 USP17L12C9JPN9 530 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 USP17L21D6R901 530 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 STXBP3O00186 592 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 TULP2O00295 520 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 SLC26A4O43511 780 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 SRGNP10124 158 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 TM4SF1P30408 202 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 PIP4K2BP78356 416 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 ITIH3Q06033 890 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 SLC35G1Q2M3R5 365 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 WWC2Q6AWC2 1192 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 MB21D1Q8N884 522 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 CCDC12Q8WUD4 166 aaPredicted RBP8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 EXOC4Q96A65 974 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 C7orf25Q9BPX7 421 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 BARHL2Q9NY43 387 aa8.14□□□□□ -1.11
LYSMD3-203ENST00000500869 CTAGE9A4FU28 777 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 CLSTN1O94985 981 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 LCA5LO95447 670 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 ZNF174Q15697 407 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 ZNF771Q7L3S4 317 aaPredicted RBP8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 PDILTQ8N807 584 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 LINC00116Q8NCU8 138 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 NUP58Q9BVL2 599 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 HAUS4Q9H6D7 363 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 IL17RBQ9NRM6 502 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 PCDHA6Q9UN73 950 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 L1RE1Q9UN81 338 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 PCDHA8Q9Y5H6 950 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 ANO9A1A5B4 782 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 LONRF2Q1L5Z9 754 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 TXLNBQ8N3L3 684 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 ANKRD20A12PQ8NF67 263 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 DESI2Q9BSY9 194 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 ZMYND12Q9H0C1 365 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 GBP3Q9H0R5 595 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 CALCOCO1Q9P1Z2 691 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 NARFQ9UHQ1 456 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 CYP2D7A0A087X1C5 515 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 PRCPP42785 496 aa8.13□□□□□ -1.11
LYSMD3-203ENST00000500869 AFMP43652 599 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms