RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 HSPA4P34932 840 aa20.09■□□□□ 0.81
AP004609.1-201ENST00000498872 ZMYM1Q5SVZ6 1142 aa20.09■□□□□ 0.81
AP004609.1-201ENST00000498872 ZNF444Q8N0Y2 327 aaPredicted RBP20.09■□□□□ 0.81
AP004609.1-201ENST00000498872 TRPV1Q8NER1 839 aa20.09■□□□□ 0.81
AP004609.1-201ENST00000498872 LSG1Q9H089 658 aaKnown RBP20.09■□□□□ 0.81
AP004609.1-201ENST00000498872 ZMYND8Q9ULU4 1186 aaPredicted RBP20.09■□□□□ 0.81
AP004609.1-201ENST00000498872 PLXNA1Q9UIW2 1896 aa20.09■□□□□ 0.81
AP004609.1-201ENST00000498872 SYN1P17600 705 aa20.09■□□□□ 0.81
AP004609.1-201ENST00000498872 MROH8Q9H579 483 aa20.09■□□□□ 0.81
AP004609.1-201ENST00000498872 F5H6K3 240 aa20.08■□□□□ 0.8
AP004609.1-201ENST00000498872 VWA5AO00534 786 aa20.08■□□□□ 0.8
AP004609.1-201ENST00000498872 HSP90AA1P07900 732 aaKnown RBP20.08■□□□□ 0.8
AP004609.1-201ENST00000498872 KLRC3Q07444 240 aa20.08■□□□□ 0.8
AP004609.1-201ENST00000498872 ANO1Q5XXA6 986 aa20.08■□□□□ 0.8
AP004609.1-201ENST00000498872 KIAA1211Q6ZU35 1233 aa20.08■□□□□ 0.8
AP004609.1-201ENST00000498872 IL27Q8NEV9 243 aa20.08■□□□□ 0.8
AP004609.1-201ENST00000498872 CEP95Q96GE4 821 aa20.08■□□□□ 0.8
AP004609.1-201ENST00000498872 NACAP1Q9BZK3 213 aa20.08■□□□□ 0.8
AP004609.1-201ENST00000498872 NAPBQ9H115 298 aa20.08■□□□□ 0.8
AP004609.1-201ENST00000498872 NYAP2Q9P242 653 aa20.08■□□□□ 0.8
AP004609.1-201ENST00000498872 DDX20Q9UHI6 824 aaKnown RBP20.08■□□□□ 0.8
AP004609.1-201ENST00000498872 PPP1R9AQ9ULJ8 1098 aa20.08■□□□□ 0.8
AP004609.1-201ENST00000498872 ADAMTS5Q9UNA0 930 aa20.08■□□□□ 0.8
AP004609.1-201ENST00000498872 NDUFB10O96000 172 aa20.07■□□□□ 0.8
AP004609.1-201ENST00000498872 FCER1AP12319 257 aa20.07■□□□□ 0.8
AP004609.1-201ENST00000498872 FAM47AQ5JRC9 791 aa20.07■□□□□ 0.8
AP004609.1-201ENST00000498872 PRAMEF19Q5SWL8 479 aa20.07■□□□□ 0.8
AP004609.1-201ENST00000498872 PRO3102Q9H379 93 aa20.07■□□□□ 0.8
AP004609.1-201ENST00000498872 LAMA3Q16787 3333 aa20.07■□□□□ 0.8
AP004609.1-201ENST00000498872 IGKV6D-41A0A0C4DH26 115 aa20.06■□□□□ 0.8
AP004609.1-201ENST00000498872 PGK2P07205 417 aa20.06■□□□□ 0.8
AP004609.1-201ENST00000498872 COL6A1P12109 1028 aa20.06■□□□□ 0.8
AP004609.1-201ENST00000498872 CYBAP13498 195 aa20.06■□□□□ 0.8
AP004609.1-201ENST00000498872 PPARAQ07869 468 aa20.06■□□□□ 0.8
AP004609.1-201ENST00000498872 LRRC47Q8N1G4 583 aaKnown RBP20.06■□□□□ 0.8
AP004609.1-201ENST00000498872 CHMP4CQ96CF2 233 aa20.06■□□□□ 0.8
AP004609.1-201ENST00000498872 ZNF287Q9HBT7 754 aa20.06■□□□□ 0.8
AP004609.1-201ENST00000498872 ZNF214Q9UL59 606 aaPredicted RBP20.06■□□□□ 0.8
AP004609.1-201ENST00000498872 FOXP2O15409 715 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 IGHA2P01877 340 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 STAT3P40763 770 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 OLFML2BQ68BL8 750 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 MMP19Q99542 508 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 SLF1Q9BQI6 1058 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 INCENPQ9NQS7 918 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 SLC25A27O95847 323 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 TSPY3P0CV98 308 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 TSPY8P0CW00 308 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 MCM2P49736 904 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 LRRC26Q2I0M4 334 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 VPS53Q5VIR6 699 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 RIOX2Q8IUF8 465 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 REPS2Q8NFH8 660 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 MAML3Q96JK9 1138 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 SENP6Q9GZR1 1112 aaPredicted RBP20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 MTMR4Q9NYA4 1195 aa20.05■□□□□ 0.8
AP004609.1-201ENST00000498872 MYCNP04198 464 aaPredicted RBP20.04■□□□□ 0.8
AP004609.1-201ENST00000498872 NEK4P51957 841 aa20.04■□□□□ 0.8
AP004609.1-201ENST00000498872 CTDSPL2Q05D32 466 aa20.04■□□□□ 0.8
AP004609.1-201ENST00000498872 PDE4BQ07343 736 aa20.04■□□□□ 0.8
AP004609.1-201ENST00000498872 NMIQ13287 307 aaPredicted RBP20.04■□□□□ 0.8
AP004609.1-201ENST00000498872 ABRAQ8N0Z2 381 aa20.04■□□□□ 0.8
AP004609.1-201ENST00000498872 SLC5A4Q9NY91 659 aa20.04■□□□□ 0.8
AP004609.1-201ENST00000498872 TFAP4Q01664 338 aa20.03■□□□□ 0.8
AP004609.1-201ENST00000498872 KCTD2Q14681 263 aa20.03■□□□□ 0.8
AP004609.1-201ENST00000498872 CPXCR1Q8N123 301 aa20.03■□□□□ 0.8
AP004609.1-201ENST00000498872 KIFC2Q96AC6 838 aa20.03■□□□□ 0.8
AP004609.1-201ENST00000498872 ISY1Q9ULR0 285 aaKnown RBP20.03■□□□□ 0.8
AP004609.1-201ENST00000498872 MSCO60682 206 aa20.02■□□□□ 0.8
AP004609.1-201ENST00000498872 TTLL1O95922 423 aa20.02■□□□□ 0.8
AP004609.1-201ENST00000498872 SLC3A2P08195 630 aaKnown RBP20.02■□□□□ 0.8
AP004609.1-201ENST00000498872 GJC2Q5T442 439 aaPredicted RBP20.02■□□□□ 0.8
AP004609.1-201ENST00000498872 SNRNP48Q6IEG0 339 aaKnown RBP20.02■□□□□ 0.8
AP004609.1-201ENST00000498872 FAM227BQ96M60 508 aa20.02■□□□□ 0.8
AP004609.1-201ENST00000498872 RIPK3Q9Y572 518 aa20.02■□□□□ 0.8
AP004609.1-201ENST00000498872 SMCHD1A6NHR9 2005 aa20.02■□□□□ 0.8
AP004609.1-201ENST00000498872 ATN1P54259 1190 aaPredicted RBP20.02■□□□□ 0.79
AP004609.1-201ENST00000498872 PRPF38AQ8NAV1 312 aaKnown RBP20.02■□□□□ 0.79
AP004609.1-201ENST00000498872 NEDD1Q8NHV4 660 aa20.02■□□□□ 0.79
AP004609.1-201ENST00000498872 CCDC171Q6TFL3 1326 aa20.02■□□□□ 0.79
AP004609.1-201ENST00000498872 MKL1Q969V6 931 aa20.01■□□□□ 0.79
AP004609.1-201ENST00000498872 GDF15Q99988 308 aa20.01■□□□□ 0.79
AP004609.1-201ENST00000498872 TEX13BQ9BXU2 312 aa20.01■□□□□ 0.79
AP004609.1-201ENST00000498872 FOXD4L1Q9NU39 408 aa20.01■□□□□ 0.79
AP004609.1-201ENST00000498872 SNX14Q9Y5W7 946 aa20.01■□□□□ 0.79
AP004609.1-201ENST00000498872 TACC3Q9Y6A5 838 aa20.01■□□□□ 0.79
AP004609.1-201ENST00000498872 PLIN4Q96Q06 1357 aa20■□□□□ 0.79
AP004609.1-201ENST00000498872 A0A0D9SFI3 127 aa20■□□□□ 0.79
AP004609.1-201ENST00000498872 SEPT4O43236 478 aa20■□□□□ 0.79
AP004609.1-201ENST00000498872 NMT2O60551 498 aa20■□□□□ 0.79
AP004609.1-201ENST00000498872 PTH1RQ03431 593 aa20■□□□□ 0.79
AP004609.1-201ENST00000498872 TICAM2Q86XR7 235 aa20■□□□□ 0.79
AP004609.1-201ENST00000498872 RAVER2Q9HCJ3 691 aaKnown RBP20■□□□□ 0.79
AP004609.1-201ENST00000498872 CTDP1Q9Y5B0 961 aaPredicted RBP20■□□□□ 0.79
AP004609.1-201ENST00000498872 TSPY2A6NKD2 308 aa19.99■□□□□ 0.79
AP004609.1-201ENST00000498872 DNM1LO00429 736 aa19.99■□□□□ 0.79
AP004609.1-201ENST00000498872 MAGEA10P43363 369 aaPredicted RBP19.99■□□□□ 0.79
AP004609.1-201ENST00000498872 ZNF792Q3KQV3 632 aa19.99■□□□□ 0.79
AP004609.1-201ENST00000498872 SLFN13Q68D06 897 aa19.99■□□□□ 0.79
AP004609.1-201ENST00000498872 RASGRP2Q7LDG7 609 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms