RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-208ENST00000498724 ATP2B1P20020 1258 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 FECHP22830 423 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 CASP14P31944 242 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 PBX1P40424 430 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 LIFRP42702 1097 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 MAGEA9P43362 315 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 GTF2A1P52655 376 aaPredicted RBP5.02□□□□□ -1.61
TNC-208ENST00000498724 STX17P56962 302 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 VSNL1P62760 191 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 AKAP17AQ02040 695 aaKnown RBP5.02□□□□□ -1.61
TNC-208ENST00000498724 SART3Q15020 963 aaKnown RBP5.02□□□□□ -1.61
TNC-208ENST00000498724 UBE3CQ15386 1083 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 NTRK3Q16288 839 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 METTL24Q5JXM2 366 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 CDKAL1Q5VV42 579 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 NBPF10Q6P3W6 841 aaKnown RBP5.02□□□□□ -1.61
TNC-208ENST00000498724 PADI6Q6TGC4 694 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 CYP26C1Q6V0L0 522 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 SGMS1Q86VZ5 419 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 NBPF15Q8N660 670 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 ACRBPQ8NEB7 543 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 PPM1EQ8WY54 764 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 CDC5LQ99459 802 aaKnown RBP5.02□□□□□ -1.61
TNC-208ENST00000498724 MYL10Q9BUA6 226 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 IRX2Q9BZI1 471 aaPredicted RBP5.02□□□□□ -1.61
TNC-208ENST00000498724 KRT23Q9C075 422 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 NAPBQ9H115 298 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 CSRNP2Q9H175 543 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 CNNM2Q9H8M5 875 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 SENP2Q9HC62 589 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 PIH1D3Q9NQM4 214 aaKnown RBP5.02□□□□□ -1.61
TNC-208ENST00000498724 FAM217BQ9NTX9 383 aaPredicted RBP5.02□□□□□ -1.61
TNC-208ENST00000498724 AATFQ9NY61 560 aaKnown RBP eCLIP5.02□□□□□ -1.61
TNC-208ENST00000498724 PCDH10Q9P2E7 1040 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 MYO6Q9UM54 1294 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 L1RE1Q9UN81 338 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 KCNJ14Q9UNX9 436 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 CTNND2Q9UQB3 1225 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 SRPRBQ9Y5M8 271 aaKnown RBP5.02□□□□□ -1.61
TNC-208ENST00000498724 NID2Q14112 1375 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 RTL9Q8NET4 1388 aa5.02□□□□□ -1.61
TNC-208ENST00000498724 ZNF532Q9HCE3 1301 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 RIC1Q4ADV7 1423 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 A0A0U1RQJ8 604 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 ERICH2A1L162 156 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 EIF3CLB5ME19 914 aaKnown RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 N4BP3O15049 544 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 CYP27B1O15528 508 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 N4BP1O75113 896 aaKnown RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 PPFIA4O75335 1185 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 IDH1O75874 414 aaKnown RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 UQCRFS1P1P0C7P4 283 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 PDE6AP16499 860 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 XBP1P17861 261 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 DNAJB2P25686 324 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 HMGB2P26583 209 aaKnown RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 ARHGAP25P42331 645 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 AFMP43652 599 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 NOP2P46087 812 aaKnown RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 TOB1P50616 345 aaPredicted RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 COPB1P53618 953 aaKnown RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 USP14P54578 494 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 IRX3P78415 501 aaPredicted RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 GRIN1Q05586 938 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 IFIT5Q13325 482 aaKnown RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 CUL4BQ13620 913 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 WTAPQ15007 396 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 DIXDC1Q155Q3 683 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 ALX1Q15699 326 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 AMHR2Q16671 573 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 ICE2Q659A1 982 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 CCDC70Q6NSX1 233 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 WDR93Q6P2C0 686 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 PI16Q6UXB8 463 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 LRRC31Q6UY01 552 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 APTXQ7Z2E3 356 aaKnown RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 AMIGO3Q86WK7 504 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 EHBP1Q8NDI1 1231 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 FLAD1Q8NFF5 587 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 CAGE1Q8TC20 777 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 IGDCC4Q8TDY8 1250 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 ATRIPQ8WXE1 791 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 PIGBQ92521 554 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 SMARCC1Q92922 1105 aaPredicted RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 FERMT2Q96AC1 680 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 AIDAQ96BJ3 306 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 PAGE5Q96GU1 130 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 ZNF512BQ96KM6 892 aaPredicted RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 MED15Q96RN5 788 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 NUP88Q99567 741 aaPredicted RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 EIF3CQ99613 913 aaKnown RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 SLF1Q9BQI6 1058 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 PYM1Q9BRP8 204 aaKnown RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 CRACR2AQ9BSW2 395 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 ZBED2Q9BTP6 218 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 ISCA1Q9BUE6 129 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 FAM204AQ9H8W3 233 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 VIPAS39Q9H9C1 493 aa5.01□□□□□ -1.61
TNC-208ENST00000498724 GPBP1L1Q9HC44 474 aaPredicted RBP5.01□□□□□ -1.61
TNC-208ENST00000498724 BRMS1Q9HCU9 246 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms