RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 MAP7D2Q96T17 732 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 SDF4Q9BRK5 362 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 MYH3P11055 1940 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 ITGB4P16144 1822 aa10.19□□□□□ -0.78
FN1-227ENST00000498719 DDX60Q8IY21 1712 aaKnown RBP10.19□□□□□ -0.78
FN1-227ENST00000498719 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.19□□□□□ -0.78
FN1-227ENST00000498719 SOS2Q07890 1332 aaPredicted RBP10.18□□□□□ -0.78
FN1-227ENST00000498719 CFAP99D6REC4 459 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 CPLX1O14810 134 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 CTAGE5O15320 804 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 RAB27AP51159 221 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 GUCA2AQ02747 115 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 TRIM28Q13263 835 aaKnown RBP10.18□□□□□ -0.78
FN1-227ENST00000498719 STK38Q15208 465 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 PDXDC1Q6P996 788 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.18□□□□□ -0.78
FN1-227ENST00000498719 NLRP10Q86W26 655 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 TBC1D10CQ8IV04 446 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 MYO1HQ8N1T3 1032 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 FBXL16Q8N461 479 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 MRPS27Q92552 414 aaKnown RBP10.18□□□□□ -0.78
FN1-227ENST00000498719 SLC4A9Q96Q91 983 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 PIH1D3Q9NQM4 214 aaKnown RBP10.18□□□□□ -0.78
FN1-227ENST00000498719 CNNM1Q9NRU3 951 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 RTEL1Q9NZ71 1219 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 NEDD4P46934 1319 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 MAP3K15Q6ZN16 1313 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 UBE2Q2LH0YL09 131 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 BIN1O00499 593 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 EVI5O60447 810 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 APPP05067 770 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 MYL3P08590 195 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 PHKA1P46020 1223 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 MMP14P50281 582 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 NR1H3Q13133 447 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 SQSTM1Q13501 440 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 ARSHQ5FYA8 562 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 FAM83BQ5T0W9 1011 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 ADALQ6DHV7 355 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 ANKS3Q6ZW76 656 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 CYB5R4Q7L1T6 521 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 RNF135Q8IUD6 432 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 TEX19Q8NA77 164 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 DNAJC7Q99615 494 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 PLA2G12BQ9BX93 195 aa10.18□□□□□ -0.78
FN1-227ENST00000498719 C4AP0C0L4 1744 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 C4BP0C0L5 1744 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 ABCA3Q99758 1704 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 USP27XA6NNY8 438 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 MARCKSP29966 332 aaPredicted RBP10.17□□□□□ -0.78
FN1-227ENST00000498719 ADD2P35612 726 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 CHAF1AQ13111 956 aaPredicted RBP10.17□□□□□ -0.78
FN1-227ENST00000498719 SF3B2Q13435 895 aaKnown RBP10.17□□□□□ -0.78
FN1-227ENST00000498719 LRRFIP1Q32MZ4 808 aaKnown RBP10.17□□□□□ -0.78
FN1-227ENST00000498719 DPCR1Q3MIW9 517 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 ATL3Q6DD88 541 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 LRRC8AQ8IWT6 810 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 OTUD6BQ8N6M0 293 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 PHKBQ93100 1093 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 LUZP4Q9P127 313 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 ZBTB1Q9Y2K1 713 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 C2orf72A6NCS6 295 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 IRS4O14654 1257 aaPredicted RBP10.17□□□□□ -0.78
FN1-227ENST00000498719 SPTLC2O15270 562 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 PRPF3O43395 683 aaKnown RBP10.17□□□□□ -0.78
FN1-227ENST00000498719 STARD3NLO95772 234 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 CAVIN2O95810 425 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 CTSWP56202 376 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 NAA30Q147X3 362 aaPredicted RBP10.17□□□□□ -0.78
FN1-227ENST00000498719 NBPF20Q3BBV1 942 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 ISM2Q6H9L7 571 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 SARM1Q6SZW1 724 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 VGLL2Q8N8G2 317 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 SYTL4Q96C24 671 aaPredicted RBP10.17□□□□□ -0.78
FN1-227ENST00000498719 MYL10Q9BUA6 226 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 ANO10Q9NW15 660 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 POLG2Q9UHN1 485 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 TRMT112Q9UI30 125 aaKnown RBP10.17□□□□□ -0.78
FN1-227ENST00000498719 NUP98P52948 1817 aa10.17□□□□□ -0.78
FN1-227ENST00000498719 ZNF532Q9HCE3 1301 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 B4E1Z4 1266 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 GPR182O15218 404 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 KLF4O43474 513 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 TNNT1P13805 278 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 EPHB1P54762 984 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 KIF23Q02241 960 aaPredicted RBP10.16□□□□□ -0.78
FN1-227ENST00000498719 SPICE1Q8N0Z3 855 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 EMID1Q96A84 441 aaPredicted RBP10.16□□□□□ -0.78
FN1-227ENST00000498719 LEMD3Q9Y2U8 911 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 MROH7-TTC4A0A0A0MT08 1334 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 ANKRD18BA2A2Z9 1011 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 CDC25BP30305 580 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 TPD52L1Q16890 204 aaPredicted RBP10.16□□□□□ -0.78
FN1-227ENST00000498719 CCDC102BQ68D86 513 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 MICU3Q86XE3 530 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 CEP57L1Q8IYX8 460 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 HNRNPLLQ8WVV9 542 aaKnown RBP10.16□□□□□ -0.78
FN1-227ENST00000498719 CENPOQ9BU64 300 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 PRKD2Q9BZL6 878 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms