RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 CLDND1Q9NY35 253 aa6.2□□□□□ -1.42
CSTF1-207ENST00000498689 ANGPTL2Q9UKU9 493 aa6.2□□□□□ -1.42
CSTF1-207ENST00000498689 FAM50BQ9Y247 325 aa6.2□□□□□ -1.42
CSTF1-207ENST00000498689 LEMD3Q9Y2U8 911 aa6.2□□□□□ -1.42
CSTF1-207ENST00000498689 UTP20O75691 2785 aaKnown RBP6.2□□□□□ -1.42
CSTF1-207ENST00000498689 SRRM3A6NNA2 597 aaPredicted RBP6.19□□□□□ -1.42
CSTF1-207ENST00000498689 LOC730098B7Z3J9 87 aa6.19□□□□□ -1.42
CSTF1-207ENST00000498689 ERVK-9P63128 1117 aa6.19□□□□□ -1.42
CSTF1-207ENST00000498689 ERVK-24P63145 666 aa6.19□□□□□ -1.42
CSTF1-207ENST00000498689 COL19A1Q14993 1142 aa6.19□□□□□ -1.42
CSTF1-207ENST00000498689 TAF7Q15545 349 aaPredicted RBP6.19□□□□□ -1.42
CSTF1-207ENST00000498689 TCEAL5Q5H9L2 206 aa6.19□□□□□ -1.42
CSTF1-207ENST00000498689 MFSD14BQ5SR56 506 aa6.19□□□□□ -1.42
CSTF1-207ENST00000498689 MORC1Q86VD1 984 aa6.19□□□□□ -1.42
CSTF1-207ENST00000498689 ZFPM1Q8IX07 1006 aa6.19□□□□□ -1.42
CSTF1-207ENST00000498689 PROCA1Q8NCQ7 364 aaPredicted RBP6.19□□□□□ -1.42
CSTF1-207ENST00000498689 SCLYQ96I15 445 aa6.19□□□□□ -1.42
CSTF1-207ENST00000498689 BBC3Q96PG8 261 aaPredicted RBP6.19□□□□□ -1.42
CSTF1-207ENST00000498689 PAGR1Q9BTK6 254 aa6.19□□□□□ -1.42
CSTF1-207ENST00000498689 XPNPEP3Q9NQH7 507 aa6.19□□□□□ -1.42
CSTF1-207ENST00000498689 STARD7Q9NQZ5 370 aa6.19□□□□□ -1.42
CSTF1-207ENST00000498689 PICK1Q9NRD5 415 aa6.19□□□□□ -1.42
CSTF1-207ENST00000498689 C2CD3Q4AC94 2353 aa6.18□□□□□ -1.42
CSTF1-207ENST00000498689 SIPA1L1O43166 1804 aa6.18□□□□□ -1.42
CSTF1-207ENST00000498689 NCLP19338 710 aaKnown RBP6.18□□□□□ -1.42
CSTF1-207ENST00000498689 ACLYP53396 1101 aa6.18□□□□□ -1.42
CSTF1-207ENST00000498689 HERVK_113P62684 666 aa6.18□□□□□ -1.42
CSTF1-207ENST00000498689 ANGPT1Q15389 498 aa6.18□□□□□ -1.42
CSTF1-207ENST00000498689 APOBEC3HQ6NTF7 200 aaKnown RBP6.18□□□□□ -1.42
CSTF1-207ENST00000498689 LAPTM4BQ86VI4 370 aa6.18□□□□□ -1.42
CSTF1-207ENST00000498689 HERC6Q8IVU3 1022 aa6.18□□□□□ -1.42
CSTF1-207ENST00000498689 FAM126BQ8IXS8 530 aa6.18□□□□□ -1.42
CSTF1-207ENST00000498689 RUBCNQ92622 972 aa6.18□□□□□ -1.42
CSTF1-207ENST00000498689 SMOC2Q9H3U7 446 aa6.18□□□□□ -1.42
CSTF1-207ENST00000498689 GREM2Q9H772 168 aa6.18□□□□□ -1.42
CSTF1-207ENST00000498689 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.18□□□□□ -1.42
CSTF1-207ENST00000498689 CDV3Q9UKY7 258 aaKnown RBP6.18□□□□□ -1.42
CSTF1-207ENST00000498689 PARP14Q460N5 1801 aa6.18□□□□□ -1.42
CSTF1-207ENST00000498689 MYADML2A6NDP7 307 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 DPYSL4O14531 572 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 DIAPH1O60610 1272 aaKnown RBP6.17□□□□□ -1.42
CSTF1-207ENST00000498689 TAF5LO75529 589 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 CNMDO75829 334 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 CD4P01730 458 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 HOXC6P09630 235 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 PMLP29590 882 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 ZNF200P98182 395 aaPredicted RBP6.17□□□□□ -1.42
CSTF1-207ENST00000498689 KCNC4Q03721 635 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 NFIAQ12857 509 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 SPP2Q13103 211 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 CBX2Q14781 532 aaPredicted RBP6.17□□□□□ -1.42
CSTF1-207ENST00000498689 C6orf132Q5T0Z8 1188 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 RPAINQ86UA6 219 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 FAM151AQ8WW52 585 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 RTKNQ9BST9 563 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 PATJQ8NI35 1801 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 KIAA1671Q9BY89 1806 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 FBN3Q75N90 2809 aa6.17□□□□□ -1.42
CSTF1-207ENST00000498689 SLC15A5A6NIM6 579 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 PI15O43692 258 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 PDE8AO60658 829 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 ADAMTS4O75173 837 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 TBX10O75333 385 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 GTF2F1P35269 517 aaKnown RBP eCLIP6.16□□□□□ -1.42
CSTF1-207ENST00000498689 GRB14Q14449 540 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 WDR78Q5VTH9 848 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 FKBP1CQ5VVH2 108 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 DEFB128Q7Z7B8 93 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 RNF180Q86T96 592 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 CCAR1Q8IX12 1150 aaKnown RBP6.16□□□□□ -1.42
CSTF1-207ENST00000498689 DDX12PQ92771 950 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 EPAS1Q99814 870 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 HAUS7Q99871 368 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 HIPK3Q9H422 1215 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 MIA3Q5JRA6 1907 aa6.16□□□□□ -1.42
CSTF1-207ENST00000498689 ASXL3Q9C0F0 2248 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 TRIM6-TRIM34B2RNG4 842 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 U2SURPO15042 1029 aaKnown RBP6.15□□□□□ -1.42
CSTF1-207ENST00000498689 LINC01565O15544 149 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 TAL1P17542 331 aaPredicted RBP6.15□□□□□ -1.42
CSTF1-207ENST00000498689 KCNJ4P48050 445 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 ERVK-21P61565 698 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 IRX3P78415 501 aaPredicted RBP6.15□□□□□ -1.42
CSTF1-207ENST00000498689 SMAD4Q13485 552 aaKnown RBP6.15□□□□□ -1.42
CSTF1-207ENST00000498689 KCNA10Q16322 511 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 PTPN21Q16825 1174 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 CTC1Q2NKJ3 1217 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 N4BP2L1Q5TBK1 243 aaPredicted RBP6.15□□□□□ -1.42
CSTF1-207ENST00000498689 CCSAPQ6IQ19 270 aaPredicted RBP6.15□□□□□ -1.42
CSTF1-207ENST00000498689 UNQ6494/PRO21346Q6UXR6 183 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 KDF1Q8NAX2 398 aaPredicted RBP6.15□□□□□ -1.42
CSTF1-207ENST00000498689 SUMF1Q8NBK3 374 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 BANK1Q8NDB2 785 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 RTF1Q92541 710 aaKnown RBP6.15□□□□□ -1.42
CSTF1-207ENST00000498689 MRPL38Q96DV4 380 aaKnown RBP6.15□□□□□ -1.42
CSTF1-207ENST00000498689 AGBL1Q96MI9 1066 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 SLC9A7Q96T83 725 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 CDC5LQ99459 802 aaKnown RBP6.15□□□□□ -1.42
CSTF1-207ENST00000498689 C17orf80Q9BSJ5 609 aa6.15□□□□□ -1.42
CSTF1-207ENST00000498689 NOC4LQ9BVI4 516 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms