RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 LRRC47Q8N1G4 583 aaKnown RBP30.84■■■□□ 2.53
CUL4A-211ENST00000498562 TTLL1O95922 423 aa30.83■■■□□ 2.53
CUL4A-211ENST00000498562 ZNF865P0CJ78 1059 aaPredicted RBP30.83■■■□□ 2.53
CUL4A-211ENST00000498562 RARBP10826 455 aa30.83■■■□□ 2.53
CUL4A-211ENST00000498562 ADCYAP1R1P41586 468 aa30.83■■■□□ 2.53
CUL4A-211ENST00000498562 GMCL1P1Q8NEA9 526 aa30.83■■■□□ 2.53
CUL4A-211ENST00000498562 LBHD1Q9BQE6 289 aaPredicted RBP30.83■■■□□ 2.53
CUL4A-211ENST00000498562 NAPBQ9H115 298 aa30.83■■■□□ 2.53
CUL4A-211ENST00000498562 XPNPEP3Q9NQH7 507 aa30.83■■■□□ 2.53
CUL4A-211ENST00000498562 PRKAG2Q9UGJ0 569 aa30.83■■■□□ 2.53
CUL4A-211ENST00000498562 PPARAQ07869 468 aa30.82■■■□□ 2.52
CUL4A-211ENST00000498562 TRIM60Q495X7 471 aa30.82■■■□□ 2.52
CUL4A-211ENST00000498562 DEFB123Q8N688 67 aa30.82■■■□□ 2.52
CUL4A-211ENST00000498562 NEDD1Q8NHV4 660 aa30.82■■■□□ 2.52
CUL4A-211ENST00000498562 TSPY3P0CV98 308 aa30.81■■■□□ 2.52
CUL4A-211ENST00000498562 TSPY8P0CW00 308 aa30.81■■■□□ 2.52
CUL4A-211ENST00000498562 PDE4BQ07343 736 aa30.81■■■□□ 2.52
CUL4A-211ENST00000498562 Q7L0L9 218 aa30.81■■■□□ 2.52
CUL4A-211ENST00000498562 FERMT2Q96AC1 680 aa30.81■■■□□ 2.52
CUL4A-211ENST00000498562 KIFC2Q96AC6 838 aa30.81■■■□□ 2.52
CUL4A-211ENST00000498562 SLC38A10Q9HBR0 1119 aa30.81■■■□□ 2.52
CUL4A-211ENST00000498562 FEM1BQ9UK73 627 aa30.81■■■□□ 2.52
CUL4A-211ENST00000498562 DNAJC25-GNG10A0A024R161 153 aa30.8■■■□□ 2.52
CUL4A-211ENST00000498562 FOXP2O15409 715 aa30.8■■■□□ 2.52
CUL4A-211ENST00000498562 ZBED4O75132 1171 aa30.8■■■□□ 2.52
CUL4A-211ENST00000498562 AKR1A1P14550 325 aa30.8■■■□□ 2.52
CUL4A-211ENST00000498562 C1orf53Q5VUE5 145 aa30.8■■■□□ 2.52
CUL4A-211ENST00000498562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.8■■■□□ 2.52
CUL4A-211ENST00000498562 CPXCR1Q8N123 301 aa30.8■■■□□ 2.52
CUL4A-211ENST00000498562 MSL3Q8N5Y2 521 aaKnown RBP30.8■■■□□ 2.52
CUL4A-211ENST00000498562 RAVER2Q9HCJ3 691 aaKnown RBP30.8■■■□□ 2.52
CUL4A-211ENST00000498562 PHF24Q9UPV7 400 aa30.8■■■□□ 2.52
CUL4A-211ENST00000498562 SYNGAP1Q96PV0 1343 aa30.79■■■□□ 2.52
CUL4A-211ENST00000498562 PGK1P00558 417 aa30.79■■■□□ 2.52
CUL4A-211ENST00000498562 LENG1Q96BZ8 264 aaPredicted RBP30.79■■■□□ 2.52
CUL4A-211ENST00000498562 CNPY2Q9Y2B0 182 aa30.79■■■□□ 2.52
CUL4A-211ENST00000498562 SLC3A2P08195 630 aaKnown RBP30.78■■■□□ 2.52
CUL4A-211ENST00000498562 TFAP4Q01664 338 aa30.78■■■□□ 2.52
CUL4A-211ENST00000498562 SLFN13Q68D06 897 aa30.78■■■□□ 2.52
CUL4A-211ENST00000498562 MAMDC4Q6UXC1 1216 aa30.78■■■□□ 2.52
CUL4A-211ENST00000498562 CCDC129Q6ZRS4 1044 aa30.78■■■□□ 2.52
CUL4A-211ENST00000498562 DDX11Q96FC9 970 aa30.78■■■□□ 2.52
CUL4A-211ENST00000498562 PDLIM7Q9NR12 457 aa30.78■■■□□ 2.52
CUL4A-211ENST00000498562 CTDP1Q9Y5B0 961 aaPredicted RBP30.78■■■□□ 2.52
CUL4A-211ENST00000498562 LAMA2P24043 3122 aaKnown RBP30.78■■■□□ 2.52
CUL4A-211ENST00000498562 SLC4A3P48751 1232 aa30.77■■■□□ 2.52
CUL4A-211ENST00000498562 RNF180Q86T96 592 aa30.77■■■□□ 2.52
CUL4A-211ENST00000498562 PRDM5Q9NQX1 630 aaPredicted RBP30.77■■■□□ 2.52
CUL4A-211ENST00000498562 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.77■■■□□ 2.52
CUL4A-211ENST00000498562 ADAMTS4O75173 837 aa30.76■■■□□ 2.51
CUL4A-211ENST00000498562 SNAI1O95863 264 aaPredicted RBP30.76■■■□□ 2.51
CUL4A-211ENST00000498562 BMP3P12645 472 aa30.76■■■□□ 2.51
CUL4A-211ENST00000498562 OAZ1P54368 228 aa30.76■■■□□ 2.51
CUL4A-211ENST00000498562 CRBNQ96SW2 442 aa30.76■■■□□ 2.51
CUL4A-211ENST00000498562 ANKRD45Q5TZF3 282 aa30.75■■■□□ 2.51
CUL4A-211ENST00000498562 ZNF467Q7Z7K2 595 aaPredicted RBP30.75■■■□□ 2.51
CUL4A-211ENST00000498562 MTMR10Q9NXD2 777 aa30.75■■■□□ 2.51
CUL4A-211ENST00000498562 MCM3APO60318 1980 aa30.75■■■□□ 2.51
CUL4A-211ENST00000498562 SH3RF1Q7Z6J0 888 aa30.74■■■□□ 2.51
CUL4A-211ENST00000498562 CHST13Q8NET6 341 aa30.74■■■□□ 2.51
CUL4A-211ENST00000498562 FGD4Q96M96 766 aa30.74■■■□□ 2.51
CUL4A-211ENST00000498562 FBXO40Q9UH90 709 aa30.74■■■□□ 2.51
CUL4A-211ENST00000498562 SYNRGQ9UMZ2 1314 aa30.73■■■□□ 2.51
CUL4A-211ENST00000498562 A0A1W2PQ45 241 aaPredicted RBP30.73■■■□□ 2.51
CUL4A-211ENST00000498562 A0A1W2PQY0 241 aa30.73■■■□□ 2.51
CUL4A-211ENST00000498562 TMEM232C9JQI7 657 aa30.73■■■□□ 2.51
CUL4A-211ENST00000498562 CTDSPL2Q05D32 466 aa30.73■■■□□ 2.51
CUL4A-211ENST00000498562 GMCL1Q96IK5 515 aa30.73■■■□□ 2.51
CUL4A-211ENST00000498562 ZHX1Q9UKY1 873 aaPredicted RBP30.73■■■□□ 2.51
CUL4A-211ENST00000498562 TRIM43BA6NCK2 446 aa30.72■■■□□ 2.51
CUL4A-211ENST00000498562 FDX1P10109 184 aa30.72■■■□□ 2.51
CUL4A-211ENST00000498562 STAT2P52630 851 aa30.72■■■□□ 2.51
CUL4A-211ENST00000498562 TLE2Q04725 743 aa30.72■■■□□ 2.51
CUL4A-211ENST00000498562 VPS53Q5VIR6 699 aa30.72■■■□□ 2.51
CUL4A-211ENST00000498562 ANKRD35Q8N283 1001 aa30.72■■■□□ 2.51
CUL4A-211ENST00000498562 BADQ92934 168 aa30.72■■■□□ 2.51
CUL4A-211ENST00000498562 TRIM43Q96BQ3 446 aaPredicted RBP30.72■■■□□ 2.51
CUL4A-211ENST00000498562 EVI5LQ96CN4 794 aa30.72■■■□□ 2.51
CUL4A-211ENST00000498562 ZBTB47Q9UFB7 747 aaPredicted RBP30.72■■■□□ 2.51
CUL4A-211ENST00000498562 FAM184BQ9ULE4 1060 aa30.72■■■□□ 2.51
CUL4A-211ENST00000498562 TACC3Q9Y6A5 838 aa30.72■■■□□ 2.51
CUL4A-211ENST00000498562 INCENPQ9NQS7 918 aa30.71■■■□□ 2.51
CUL4A-211ENST00000498562 IL17RBQ9NRM6 502 aa30.71■■■□□ 2.51
CUL4A-211ENST00000498562 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.71■■■□□ 2.51
CUL4A-211ENST00000498562 TSPY2A6NKD2 308 aa30.7■■■□□ 2.51
CUL4A-211ENST00000498562 PDE1AP54750 535 aa30.7■■■□□ 2.51
CUL4A-211ENST00000498562 HDAC1Q13547 482 aaPredicted RBP30.7■■■□□ 2.51
CUL4A-211ENST00000498562 PPP4R3BQ5MIZ7 849 aa30.7■■■□□ 2.51
CUL4A-211ENST00000498562 FAM160B2Q86V87 743 aa30.7■■■□□ 2.51
CUL4A-211ENST00000498562 KLHDC9Q8NEP7 349 aa30.7■■■□□ 2.51
CUL4A-211ENST00000498562 TSEN34Q9BSV6 310 aaKnown RBP30.7■■■□□ 2.51
CUL4A-211ENST00000498562 ANAPC4Q9UJX5 808 aa30.7■■■□□ 2.51
CUL4A-211ENST00000498562 ISY1Q9ULR0 285 aaKnown RBP30.7■■■□□ 2.51
CUL4A-211ENST00000498562 ZNF536O15090 1300 aa30.7■■■□□ 2.5
CUL4A-211ENST00000498562 SLC1A4P43007 532 aa30.69■■■□□ 2.5
CUL4A-211ENST00000498562 ACVR2BQ13705 512 aa30.69■■■□□ 2.5
CUL4A-211ENST00000498562 SLC17A8Q8NDX2 589 aa30.69■■■□□ 2.5
CUL4A-211ENST00000498562 CHURC1Q8WUH1 139 aa30.69■■■□□ 2.5
CUL4A-211ENST00000498562 STAG1Q8WVM7 1258 aa30.69■■■□□ 2.5
CUL4A-211ENST00000498562 HOMER2Q9NSB8 354 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms