RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 LRRFIP1Q32MZ4 808 aaKnown RBP16.35■□□□□ 0.21
SHANK2-217ENST00000498519 SNRNP48Q6IEG0 339 aaKnown RBP16.35■□□□□ 0.21
SHANK2-217ENST00000498519 REPS2Q8NFH8 660 aa16.35■□□□□ 0.21
SHANK2-217ENST00000498519 GPATCH3Q96I76 525 aa16.35■□□□□ 0.21
SHANK2-217ENST00000498519 GLT1D1Q96MS3 346 aa16.35■□□□□ 0.21
SHANK2-217ENST00000498519 LRRCC1Q9C099 1032 aa16.35■□□□□ 0.21
SHANK2-217ENST00000498519 ELP1O95163 1332 aa16.35■□□□□ 0.21
SHANK2-217ENST00000498519 A0A0G2JMZ2 1700 aa16.34■□□□□ 0.21
SHANK2-217ENST00000498519 F5H6K3 240 aa16.34■□□□□ 0.21
SHANK2-217ENST00000498519 ADAMTS4O75173 837 aa16.34■□□□□ 0.21
SHANK2-217ENST00000498519 DUSP11O75319 330 aaKnown RBP16.34■□□□□ 0.21
SHANK2-217ENST00000498519 GNAT2P19087 354 aa16.34■□□□□ 0.21
SHANK2-217ENST00000498519 KLRC3Q07444 240 aa16.34■□□□□ 0.21
SHANK2-217ENST00000498519 SIRT2Q8IXJ6 389 aa16.34■□□□□ 0.21
SHANK2-217ENST00000498519 VCANP13611 3396 aa16.34■□□□□ 0.21
SHANK2-217ENST00000498519 NAV1Q8NEY1 1877 aa16.33■□□□□ 0.21
SHANK2-217ENST00000498519 TIMP1P01033 207 aa16.33■□□□□ 0.2
SHANK2-217ENST00000498519 FDX1P10109 184 aa16.33■□□□□ 0.2
SHANK2-217ENST00000498519 TAL1P17542 331 aaPredicted RBP16.33■□□□□ 0.2
SHANK2-217ENST00000498519 CST5P28325 142 aaPredicted RBP16.33■□□□□ 0.2
SHANK2-217ENST00000498519 OAZ1P54368 228 aa16.33■□□□□ 0.2
SHANK2-217ENST00000498519 ANKRD35Q8N283 1001 aa16.33■□□□□ 0.2
SHANK2-217ENST00000498519 CHST13Q8NET6 341 aa16.33■□□□□ 0.2
SHANK2-217ENST00000498519 MYLIPQ8WY64 445 aa16.33■□□□□ 0.2
SHANK2-217ENST00000498519 STRBPQ96SI9 672 aaKnown RBP16.33■□□□□ 0.2
SHANK2-217ENST00000498519 PUS7LQ9H0K6 701 aaKnown RBP16.33■□□□□ 0.2
SHANK2-217ENST00000498519 TTYH1Q9H313 450 aaPredicted RBP16.33■□□□□ 0.2
SHANK2-217ENST00000498519 ABHD16BQ9H3Z7 469 aa16.33■□□□□ 0.2
SHANK2-217ENST00000498519 ZHX1Q9UKY1 873 aaPredicted RBP16.33■□□□□ 0.2
SHANK2-217ENST00000498519 COG6Q9Y2V7 657 aa16.33■□□□□ 0.2
SHANK2-217ENST00000498519 SYNRGQ9UMZ2 1314 aa16.33■□□□□ 0.2
SHANK2-217ENST00000498519 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
SHANK2-217ENST00000498519 FAAP100Q0VG06 881 aa16.32■□□□□ 0.2
SHANK2-217ENST00000498519 PPIGQ13427 754 aaKnown RBP eCLIP16.32■□□□□ 0.26e-9■■□□□ 14.4
SHANK2-217ENST00000498519 KCNA10Q16322 511 aa16.32■□□□□ 0.2
SHANK2-217ENST00000498519 PPP4R3BQ5MIZ7 849 aa16.32■□□□□ 0.2
SHANK2-217ENST00000498519 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.32■□□□□ 0.2
SHANK2-217ENST00000498519 ZNF444Q8N0Y2 327 aaPredicted RBP16.32■□□□□ 0.2
SHANK2-217ENST00000498519 KLHDC9Q8NEP7 349 aa16.32■□□□□ 0.2
SHANK2-217ENST00000498519 ECHDC1Q9NTX5 307 aa16.32■□□□□ 0.2
SHANK2-217ENST00000498519 FEM1BQ9UK73 627 aa16.32■□□□□ 0.2
SHANK2-217ENST00000498519 MYO5AQ9Y4I1 1855 aaKnown RBP16.32■□□□□ 0.2
SHANK2-217ENST00000498519 FRMPD3Q5JV73 1810 aa16.31■□□□□ 0.2
SHANK2-217ENST00000498519 DNAJC25-GNG10A0A024R161 153 aa16.31■□□□□ 0.2
SHANK2-217ENST00000498519 TLR3O15455 904 aaKnown RBP16.31■□□□□ 0.2
SHANK2-217ENST00000498519 NDUFB10O96000 172 aa16.31■□□□□ 0.2
SHANK2-217ENST00000498519 RASA1P20936 1047 aa16.31■□□□□ 0.2
SHANK2-217ENST00000498519 ITGB8P26012 769 aa16.31■□□□□ 0.2
SHANK2-217ENST00000498519 ACVR2BQ13705 512 aa16.31■□□□□ 0.2
SHANK2-217ENST00000498519 SLFNL1Q499Z3 407 aa16.31■□□□□ 0.2
SHANK2-217ENST00000498519 MFSD5Q6N075 450 aa16.31■□□□□ 0.2
SHANK2-217ENST00000498519 TMEM199Q8N511 208 aa16.31■□□□□ 0.2
SHANK2-217ENST00000498519 MKL1Q969V6 931 aa16.31■□□□□ 0.2
SHANK2-217ENST00000498519 VTI1AQ96AJ9 217 aa16.31■□□□□ 0.2
SHANK2-217ENST00000498519 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.31■□□□□ 0.2
SHANK2-217ENST00000498519 SEZ6LQ9BYH1 1024 aa16.31■□□□□ 0.2
SHANK2-217ENST00000498519 CLIP2Q9UDT6 1046 aa16.31■□□□□ 0.2
SHANK2-217ENST00000498519 A0A0U1RQG5 324 aaPredicted RBP16.3■□□□□ 0.2
SHANK2-217ENST00000498519 MINDY4BA8MYZ0 360 aa16.3■□□□□ 0.2
SHANK2-217ENST00000498519 SNAI1O95863 264 aaPredicted RBP16.3■□□□□ 0.2
SHANK2-217ENST00000498519 SLC3A2P08195 630 aaKnown RBP16.3■□□□□ 0.2
SHANK2-217ENST00000498519 C6orf222P0C671 652 aaPredicted RBP16.3■□□□□ 0.2
SHANK2-217ENST00000498519 DNAJB2P25686 324 aa16.3■□□□□ 0.2
SHANK2-217ENST00000498519 TDO2P48775 406 aa16.3■□□□□ 0.2
SHANK2-217ENST00000498519 CCSAPQ6IQ19 270 aaPredicted RBP16.3■□□□□ 0.2
SHANK2-217ENST00000498519 CPXCR1Q8N123 301 aa16.3■□□□□ 0.2
SHANK2-217ENST00000498519 KBTBD3Q8NAB2 608 aa16.3■□□□□ 0.2
SHANK2-217ENST00000498519 APPBP2Q92624 585 aa16.3■□□□□ 0.2
SHANK2-217ENST00000498519 KIFC2Q96AC6 838 aa16.3■□□□□ 0.2
SHANK2-217ENST00000498519 NACAP1Q9BZK3 213 aa16.3■□□□□ 0.2
SHANK2-217ENST00000498519 MTIF3Q9H2K0 278 aaKnown RBP16.3■□□□□ 0.2
SHANK2-217ENST00000498519 SLC38A10Q9HBR0 1119 aa16.3■□□□□ 0.2
SHANK2-217ENST00000498519 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.3■□□□□ 0.2
SHANK2-217ENST00000498519 CDH23Q9H251 3354 aa16.29■□□□□ 0.2
SHANK2-217ENST00000498519 GSG1L2A8MUP6 293 aa16.29■□□□□ 0.2
SHANK2-217ENST00000498519 TTLL1O95922 423 aa16.29■□□□□ 0.2
SHANK2-217ENST00000498519 APPP05067 770 aa16.29■□□□□ 0.2
SHANK2-217ENST00000498519 ASGR1P07306 291 aa16.29■□□□□ 0.2
SHANK2-217ENST00000498519 SLC4A3P48751 1232 aa16.29■□□□□ 0.2
SHANK2-217ENST00000498519 EPHB4P54760 987 aa16.29■□□□□ 0.2
SHANK2-217ENST00000498519 GJA9P57773 515 aa16.29■□□□□ 0.2
SHANK2-217ENST00000498519 GNASQ5JWF2 1037 aa16.29■□□□□ 0.2
SHANK2-217ENST00000498519 PSRC1Q6PGN9 363 aaPredicted RBP16.29■□□□□ 0.2
SHANK2-217ENST00000498519 CCDC129Q6ZRS4 1044 aa16.29■□□□□ 0.2
SHANK2-217ENST00000498519 GMCL1P1Q8NEA9 526 aa16.29■□□□□ 0.2
SHANK2-217ENST00000498519 TIFAQ96CG3 184 aa16.29■□□□□ 0.2
SHANK2-217ENST00000498519 NUP88Q99567 741 aaPredicted RBP16.29■□□□□ 0.2
SHANK2-217ENST00000498519 TBX21Q9UL17 535 aa16.29■□□□□ 0.2
SHANK2-217ENST00000498519 RIPK3Q9Y572 518 aa16.29■□□□□ 0.2
SHANK2-217ENST00000498519 RLFQ13129 1914 aa16.28■□□□□ 0.2
SHANK2-217ENST00000498519 SMIM22K7EJ46 135 aa16.28■□□□□ 0.2
SHANK2-217ENST00000498519 ARVCFO00192 962 aa16.28■□□□□ 0.2
SHANK2-217ENST00000498519 RNF113AO15541 343 aaKnown RBP16.28■□□□□ 0.2
SHANK2-217ENST00000498519 CABYRO75952 493 aa16.28■□□□□ 0.2
SHANK2-217ENST00000498519 PDE4BQ07343 736 aa16.28■□□□□ 0.2
SHANK2-217ENST00000498519 CCDC144BQ3MJ40 725 aa16.28■□□□□ 0.2
SHANK2-217ENST00000498519 LENG1Q96BZ8 264 aaPredicted RBP16.28■□□□□ 0.2
SHANK2-217ENST00000498519 GAS2L1Q99501 681 aaPredicted RBP16.28■□□□□ 0.2
SHANK2-217ENST00000498519 UPF3AQ9H1J1 476 aaKnown RBP16.28■□□□□ 0.2
SHANK2-217ENST00000498519 ZNF576Q9H609 170 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms