RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 ALDH1L2Q3SY69 923 aa6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 NBPF6Q5VWK0 638 aa6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 C1orf127Q8N9H9 656 aa6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 TMEM102Q8N9M5 508 aaPredicted RBP6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 DDX54Q8TDD1 881 aaKnown RBP6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 BSNDQ8WZ55 320 aa6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 GATA6Q92908 595 aa6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 TSR2Q969E8 191 aaKnown RBP6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 NBPF4Q96M43 638 aa6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 MCOLN1Q9GZU1 580 aa6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 SLC5A6Q9Y289 635 aa6.74□□□□□ -1.33
HMGXB4-208ENST00000498325 LY75O60449 1722 aa6.73□□□□□ -1.33
HMGXB4-208ENST00000498325 PLIN1O60240 522 aa6.73□□□□□ -1.33
HMGXB4-208ENST00000498325 BCAR3O75815 825 aa6.73□□□□□ -1.33
HMGXB4-208ENST00000498325 IL2RBP14784 551 aa6.73□□□□□ -1.33
HMGXB4-208ENST00000498325 SOX4Q06945 474 aaPredicted RBP6.73□□□□□ -1.33
HMGXB4-208ENST00000498325 PDE3AQ14432 1141 aa6.73□□□□□ -1.33
HMGXB4-208ENST00000498325 ZNF792Q3KQV3 632 aa6.73□□□□□ -1.33
HMGXB4-208ENST00000498325 VN1R5Q7Z5H4 357 aa6.73□□□□□ -1.33
HMGXB4-208ENST00000498325 FLAD1Q8NFF5 587 aa6.73□□□□□ -1.33
HMGXB4-208ENST00000498325 CCDC136Q96JN2 1154 aa6.73□□□□□ -1.33
HMGXB4-208ENST00000498325 BABAM1Q9NWV8 329 aa6.73□□□□□ -1.33
HMGXB4-208ENST00000498325 N4BP2Q86UW6 1770 aaPredicted RBP6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 GLTPD2A6NH11 291 aa6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 CHL1O00533 1208 aa6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 IPO8O15397 1037 aaKnown RBP6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 RPLP1P05386 114 aaKnown RBP6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 AAMPQ13685 434 aa6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 DCTN1Q14203 1278 aa6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 MAP7Q14244 749 aa6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 AKAP4Q5JQC9 854 aa6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 ZNF765Q7L2R6 523 aa6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 MCM10Q7L590 875 aa6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 KSR1Q8IVT5 923 aa6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 USHBP1Q8N6Y0 703 aa6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 EXOC6Q8TAG9 804 aa6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 BCL7CQ8WUZ0 217 aaPredicted RBP6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 RAPGEF4Q8WZA2 1011 aa6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 NXPE3Q969Y0 559 aa6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 THUMPD2Q9BTF0 503 aaKnown RBP6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 SOX17Q9H6I2 414 aaPredicted RBP6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 NLRP2Q9NX02 1062 aa6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 CXXC1Q9P0U4 656 aaPredicted RBP6.72□□□□□ -1.33
HMGXB4-208ENST00000498325 TOGARAM1Q9Y4F4 1720 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 NCAPD2Q15021 1401 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 NFICP08651 508 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 MMP10P09238 476 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 SOX10P56693 466 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 TAF7Q15545 349 aaPredicted RBP6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 TWISTNBQ3B726 338 aaPredicted RBP6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 C1orf141Q5JVX7 400 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 ZKSCAN2Q63HK3 967 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 ZNF574Q6ZN55 896 aaPredicted RBP6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 STK11IPQ8N1F8 1099 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 FRAT1Q92837 279 aaPredicted RBP6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 CRBNQ96SW2 442 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 OSMRQ99650 979 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 CHMP4AQ9BY43 222 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 SMC4Q9NTJ3 1288 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 SPG7Q9UQ90 795 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 KIF16BQ96L93 1317 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 PASKQ96RG2 1323 aa6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 FAM208AQ9UK61 1670 aaKnown RBP6.71□□□□□ -1.34
HMGXB4-208ENST00000498325 RGPD5Q99666 1765 aa6.7□□□□□ -1.34
HMGXB4-208ENST00000498325 VAMP4O75379 141 aa6.7□□□□□ -1.34
HMGXB4-208ENST00000498325 ADH5P11766 374 aa6.7□□□□□ -1.34
HMGXB4-208ENST00000498325 B4GALNT3Q6L9W6 998 aa6.7□□□□□ -1.34
HMGXB4-208ENST00000498325 ZNF530Q6P9A1 599 aaPredicted RBP6.7□□□□□ -1.34
HMGXB4-208ENST00000498325 XKR5Q6UX68 686 aa6.7□□□□□ -1.34
HMGXB4-208ENST00000498325 PMEPA1Q969W9 287 aa6.7□□□□□ -1.34
HMGXB4-208ENST00000498325 TSPYL4Q9UJ04 414 aa6.7□□□□□ -1.34
HMGXB4-208ENST00000498325 SOS1Q07889 1333 aaPredicted RBP6.7□□□□□ -1.34
HMGXB4-208ENST00000498325 RGPD2P0DJD1 1756 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 VIRMAQ69YN4 1812 aaKnown RBP6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 C5P01031 1676 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 RAB6AP20340 208 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 MAP2K1Q02750 393 aaPredicted RBP6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 GSTM4Q03013 218 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 TEFQ10587 303 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 HABP4Q5JVS0 413 aaKnown RBP6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 SPRED2Q7Z698 418 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 ATG4DQ86TL0 474 aaPredicted RBP6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 ATCAYQ86WG3 371 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 IL17REQ8NFR9 667 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 SSH1Q8WYL5 1049 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 FAM168AQ92567 244 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 ARHGAP45Q92619 1136 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 SLC38A3Q99624 504 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 ZKSCAN3Q9BRR0 538 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 CHMP4BQ9H444 224 aaKnown RBP6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 ACTL7BQ9Y614 415 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 KIF13BQ9NQT8 1826 aa6.69□□□□□ -1.34
HMGXB4-208ENST00000498325 KDM6AO15550 1401 aaPredicted RBP6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 RASSF10A6NK89 507 aa6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 TMEM88BA6NKF7 163 aa6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 ELL2O00472 640 aaPredicted RBP6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 HSP90AB1P08238 724 aaKnown RBP6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 ESRRAP11474 423 aaPredicted RBP6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 PCSK2P16519 638 aa6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 DALRD3Q5D0E6 543 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms