RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 ANKRD23Q86SG2 305 aa15.78■□□□□ 0.12
CPNE1-227ENST00000498056 FAM160B2Q86V87 743 aa15.78■□□□□ 0.12
CPNE1-227ENST00000498056 CMTR1Q8N1G2 835 aaKnown RBP15.78■□□□□ 0.12
CPNE1-227ENST00000498056 FAM43AQ8N2R8 423 aa15.78■□□□□ 0.12
CPNE1-227ENST00000498056 MAP3K14Q99558 947 aa15.78■□□□□ 0.12
CPNE1-227ENST00000498056 SLF1Q9BQI6 1058 aa15.78■□□□□ 0.12
CPNE1-227ENST00000498056 UBA5Q9GZZ9 404 aa15.78■□□□□ 0.12
CPNE1-227ENST00000498056 FEM1BQ9UK73 627 aa15.78■□□□□ 0.12
CPNE1-227ENST00000498056 CCDC196A0A1B0GTZ2 297 aa15.77■□□□□ 0.12
CPNE1-227ENST00000498056 PALM3A6NDB9 673 aaPredicted RBP15.77■□□□□ 0.12
CPNE1-227ENST00000498056 PFKFB2O60825 505 aa15.77■□□□□ 0.12
CPNE1-227ENST00000498056 OSBPP22059 807 aa15.77■□□□□ 0.12
CPNE1-227ENST00000498056 SYDE2Q5VT97 1194 aa15.77■□□□□ 0.12
CPNE1-227ENST00000498056 CATSPERGQ6ZRH7 1159 aa15.77■□□□□ 0.12
CPNE1-227ENST00000498056 HOMER1Q86YM7 354 aa15.77■□□□□ 0.12
CPNE1-227ENST00000498056 CCDC82Q8N4S0 544 aa15.77■□□□□ 0.12
CPNE1-227ENST00000498056 SMCR8Q8TEV9 937 aaPredicted RBP15.77■□□□□ 0.12
CPNE1-227ENST00000498056 PIBF1Q8WXW3 757 aa15.77■□□□□ 0.12
CPNE1-227ENST00000498056 TMX3Q96JJ7 454 aa15.77■□□□□ 0.12
CPNE1-227ENST00000498056 PARK7Q99497 189 aaKnown RBP15.77■□□□□ 0.12
CPNE1-227ENST00000498056 ASCC2Q9H1I8 757 aaPredicted RBP15.77■□□□□ 0.12
CPNE1-227ENST00000498056 PLXNA1Q9UIW2 1896 aa15.77■□□□□ 0.11
CPNE1-227ENST00000498056 TESPA1A2RU30 521 aaPredicted RBP15.76■□□□□ 0.11
CPNE1-227ENST00000498056 PPFIA3O75145 1194 aa15.76■□□□□ 0.11
CPNE1-227ENST00000498056 ADD1P35611 737 aaKnown RBP15.76■□□□□ 0.11
CPNE1-227ENST00000498056 GNAQP50148 359 aa15.76■□□□□ 0.11
CPNE1-227ENST00000498056 ST3GAL1Q11201 340 aa15.76■□□□□ 0.11
CPNE1-227ENST00000498056 TAF1CQ15572 869 aaPredicted RBP15.76■□□□□ 0.11
CPNE1-227ENST00000498056 CPLX2Q6PUV4 134 aaKnown RBP15.76■□□□□ 0.11
CPNE1-227ENST00000498056 IFNL1Q8IU54 200 aa15.76■□□□□ 0.11
CPNE1-227ENST00000498056 CHURC1Q8WUH1 139 aa15.76■□□□□ 0.11
CPNE1-227ENST00000498056 SNX21Q969T3 373 aa15.76■□□□□ 0.11
CPNE1-227ENST00000498056 ATG4CQ96DT6 458 aa15.76■□□□□ 0.11
CPNE1-227ENST00000498056 PTPN18Q99952 460 aa15.76■□□□□ 0.11
CPNE1-227ENST00000498056 PPP1R9AQ9ULJ8 1098 aa15.76■□□□□ 0.11
CPNE1-227ENST00000498056 PRR12Q9ULL5 1215 aa15.76■□□□□ 0.11
CPNE1-227ENST00000498056 LCTP09848 1927 aa15.75■□□□□ 0.11
CPNE1-227ENST00000498056 ZNFX1Q9P2E3 1918 aaKnown RBP15.75■□□□□ 0.11
CPNE1-227ENST00000498056 MYH15Q9Y2K3 1946 aa15.75■□□□□ 0.11
CPNE1-227ENST00000498056 SPDYE16A6NNV3 312 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-227ENST00000498056 CDKL5O76039 1030 aa15.75■□□□□ 0.11
CPNE1-227ENST00000498056 CYP2C8P10632 490 aa15.75■□□□□ 0.11
CPNE1-227ENST00000498056 HOXA7P31268 230 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-227ENST00000498056 SNAP25P60880 206 aa15.75■□□□□ 0.11
CPNE1-227ENST00000498056 PPP2R5BQ15173 497 aa15.75■□□□□ 0.11
CPNE1-227ENST00000498056 CDC37Q16543 378 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-227ENST00000498056 OTUD7BQ6GQQ9 843 aa15.75■□□□□ 0.11
CPNE1-227ENST00000498056 NBPF11Q86T75 865 aa15.75■□□□□ 0.11
CPNE1-227ENST00000498056 SRBD1Q8N5C6 995 aaKnown RBP15.75■□□□□ 0.11
CPNE1-227ENST00000498056 VAT1LQ9HCJ6 419 aa15.75■□□□□ 0.11
CPNE1-227ENST00000498056 FAM217BQ9NTX9 383 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-227ENST00000498056 SLC45A1Q9Y2W3 748 aa15.75■□□□□ 0.11
CPNE1-227ENST00000498056 CTDP1Q9Y5B0 961 aaPredicted RBP15.75■□□□□ 0.11
CPNE1-227ENST00000498056 MYPNQ86TC9 1320 aa15.74■□□□□ 0.11
CPNE1-227ENST00000498056 PTPDC1A2A3K4 754 aa15.74■□□□□ 0.11
CPNE1-227ENST00000498056 DTNBO60941 627 aa15.74■□□□□ 0.11
CPNE1-227ENST00000498056 INHBEP58166 350 aa15.74■□□□□ 0.11
CPNE1-227ENST00000498056 HERVK_113P62684 666 aa15.74■□□□□ 0.11
CPNE1-227ENST00000498056 BECN1Q14457 450 aa15.74■□□□□ 0.11
CPNE1-227ENST00000498056 CCDC174Q6PII3 467 aa15.74■□□□□ 0.11
CPNE1-227ENST00000498056 ADGRF4Q8IZF3 695 aa15.74■□□□□ 0.11
CPNE1-227ENST00000498056 PHKBQ93100 1093 aa15.74■□□□□ 0.11
CPNE1-227ENST00000498056 LZTS2Q9BRK4 669 aa15.74■□□□□ 0.11
CPNE1-227ENST00000498056 PAGR1Q9BTK6 254 aa15.74■□□□□ 0.11
CPNE1-227ENST00000498056 SPZ1Q9BXG8 430 aa15.74■□□□□ 0.11
CPNE1-227ENST00000498056 SLC26A6Q9BXS9 759 aa15.74■□□□□ 0.11
CPNE1-227ENST00000498056 ZCCHC17Q9NP64 241 aaKnown RBP15.74■□□□□ 0.11
CPNE1-227ENST00000498056 SEC63Q9UGP8 760 aaKnown RBP15.74■□□□□ 0.11
CPNE1-227ENST00000498056 hCG_1642624A0A1W2PR95 340 aa15.73■□□□□ 0.11
CPNE1-227ENST00000498056 CYTH3O43739 400 aa15.73■□□□□ 0.11
CPNE1-227ENST00000498056 HSP90AA1P07900 732 aaKnown RBP15.73■□□□□ 0.11
CPNE1-227ENST00000498056 DSG3P32926 999 aa15.73■□□□□ 0.11
CPNE1-227ENST00000498056 MAP2K2P36507 400 aa15.73■□□□□ 0.11
CPNE1-227ENST00000498056 AKAP17AQ02040 695 aaKnown RBP15.73■□□□□ 0.11
CPNE1-227ENST00000498056 COG2Q14746 738 aa15.73■□□□□ 0.11
CPNE1-227ENST00000498056 SLC35G1Q2M3R5 365 aa15.73■□□□□ 0.11
CPNE1-227ENST00000498056 BTNL9Q6UXG8 535 aa15.73■□□□□ 0.11
CPNE1-227ENST00000498056 TRIM22Q8IYM9 498 aa15.73■□□□□ 0.11
CPNE1-227ENST00000498056 PRPF38AQ8NAV1 312 aaKnown RBP15.73■□□□□ 0.11
CPNE1-227ENST00000498056 RRP36Q96EU6 259 aaKnown RBP15.73■□□□□ 0.11
CPNE1-227ENST00000498056 JAK2O60674 1132 aa15.72■□□□□ 0.11
CPNE1-227ENST00000498056 PLA2G6O60733 806 aa15.72■□□□□ 0.11
CPNE1-227ENST00000498056 IFNAR1P17181 557 aa15.72■□□□□ 0.11
CPNE1-227ENST00000498056 TM4SF4P48230 202 aa15.72■□□□□ 0.11
CPNE1-227ENST00000498056 PLS1Q14651 629 aa15.72■□□□□ 0.11
CPNE1-227ENST00000498056 QRICH1Q2TAL8 776 aa15.72■□□□□ 0.11
CPNE1-227ENST00000498056 REM2Q8IYK8 340 aaPredicted RBP15.72■□□□□ 0.11
CPNE1-227ENST00000498056 NSUN7Q8NE18 718 aaKnown RBP15.72■□□□□ 0.11
CPNE1-227ENST00000498056 DDX11Q96FC9 970 aa15.72■□□□□ 0.11
CPNE1-227ENST00000498056 PIGSQ96S52 555 aa15.72■□□□□ 0.11
CPNE1-227ENST00000498056 JMJD4Q9H9V9 463 aa15.72■□□□□ 0.11
CPNE1-227ENST00000498056 FOXD4L1Q9NU39 408 aa15.72■□□□□ 0.11
CPNE1-227ENST00000498056 DOCK3Q8IZD9 2030 aa15.72■□□□□ 0.11
CPNE1-227ENST00000498056 STK36Q9NRP7 1315 aa15.71■□□□□ 0.11
CPNE1-227ENST00000498056 ZNF236Q9UL36 1845 aa15.71■□□□□ 0.11
CPNE1-227ENST00000498056 VWA5AO00534 786 aa15.71■□□□□ 0.11
CPNE1-227ENST00000498056 PEX10O60683 326 aa15.71■□□□□ 0.11
CPNE1-227ENST00000498056 ZBED4O75132 1171 aa15.71■□□□□ 0.11
CPNE1-227ENST00000498056 CTDNEP1O95476 244 aa15.71■□□□□ 0.11
CPNE1-227ENST00000498056 TAL1P17542 331 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms