RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ANKLE1Q8NAG6 615 aa18.1■□□□□ 0.49
NUP50-219ENST00000497960 REPS2Q8NFH8 660 aa18.1■□□□□ 0.49
NUP50-219ENST00000497960 DPF3Q92784 378 aa18.1■□□□□ 0.49
NUP50-219ENST00000497960 GMCL1Q96IK5 515 aa18.1■□□□□ 0.49
NUP50-219ENST00000497960 MMP19Q99542 508 aa18.1■□□□□ 0.49
NUP50-219ENST00000497960 MKI67P46013 3256 aaKnown RBP18.1■□□□□ 0.49
NUP50-219ENST00000497960 ZNF213O14771 459 aa18.09■□□□□ 0.49
NUP50-219ENST00000497960 COBLO75128 1261 aa18.09■□□□□ 0.49
NUP50-219ENST00000497960 MCCP23508 829 aa18.09■□□□□ 0.49
NUP50-219ENST00000497960 CCND3P30281 292 aaPredicted RBP18.09■□□□□ 0.49
NUP50-219ENST00000497960 IKQ13123 557 aaPredicted RBP18.09■□□□□ 0.49
NUP50-219ENST00000497960 OLFML2BQ68BL8 750 aa18.09■□□□□ 0.49
NUP50-219ENST00000497960 SNRNP48Q6IEG0 339 aaKnown RBP18.09■□□□□ 0.49
NUP50-219ENST00000497960 FAM160B2Q86V87 743 aa18.09■□□□□ 0.49
NUP50-219ENST00000497960 CPXCR1Q8N123 301 aa18.09■□□□□ 0.49
NUP50-219ENST00000497960 CHURC1Q8WUH1 139 aa18.09■□□□□ 0.49
NUP50-219ENST00000497960 STAG1Q8WVM7 1258 aa18.09■□□□□ 0.49
NUP50-219ENST00000497960 DSCC1Q9BVC3 393 aa18.09■□□□□ 0.49
NUP50-219ENST00000497960 CTNNA3Q9UI47 895 aa18.09■□□□□ 0.49
NUP50-219ENST00000497960 PARP14Q460N5 1801 aa18.09■□□□□ 0.49
NUP50-219ENST00000497960 TMEM232C9JQI7 657 aa18.08■□□□□ 0.48
NUP50-219ENST00000497960 FDX1P10109 184 aa18.08■□□□□ 0.48
NUP50-219ENST00000497960 CYP2C19P33261 490 aa18.08■□□□□ 0.48
NUP50-219ENST00000497960 SLC4A3P48751 1232 aa18.08■□□□□ 0.48
NUP50-219ENST00000497960 STAT2P52630 851 aa18.08■□□□□ 0.48
NUP50-219ENST00000497960 NECAB2Q7Z6G3 386 aa18.08■□□□□ 0.48
NUP50-219ENST00000497960 RUFY2Q8WXA3 655 aa18.08■□□□□ 0.48
NUP50-219ENST00000497960 SLC38A10Q9HBR0 1119 aa18.08■□□□□ 0.48
NUP50-219ENST00000497960 TCP11L1Q9NUJ3 509 aa18.08■□□□□ 0.48
NUP50-219ENST00000497960 OGDHLQ9ULD0 1010 aa18.08■□□□□ 0.48
NUP50-219ENST00000497960 CEP290O15078 2479 aa18.07■□□□□ 0.48
NUP50-219ENST00000497960 ATP2A1O14983 1001 aa18.07■□□□□ 0.48
NUP50-219ENST00000497960 TOP1P11387 765 aaKnown RBP18.07■□□□□ 0.48
NUP50-219ENST00000497960 CNGA1P29973 690 aa18.07■□□□□ 0.48
NUP50-219ENST00000497960 NOVP48745 357 aa18.07■□□□□ 0.48
NUP50-219ENST00000497960 NT5C2P49902 561 aa18.07■□□□□ 0.48
NUP50-219ENST00000497960 RCSD1Q6JBY9 416 aa18.07■□□□□ 0.48
NUP50-219ENST00000497960 TBC1D10CQ8IV04 446 aa18.07■□□□□ 0.48
NUP50-219ENST00000497960 ESR2Q92731 530 aa18.07■□□□□ 0.48
NUP50-219ENST00000497960 CHMP4CQ96CF2 233 aa18.07■□□□□ 0.48
NUP50-219ENST00000497960 PAWRQ96IZ0 340 aaKnown RBP18.07■□□□□ 0.48
NUP50-219ENST00000497960 NBPF3Q9H094 633 aa18.07■□□□□ 0.48
NUP50-219ENST00000497960 RAVER2Q9HCJ3 691 aaKnown RBP18.07■□□□□ 0.48
NUP50-219ENST00000497960 MTMR7Q9Y216 660 aa18.07■□□□□ 0.48
NUP50-219ENST00000497960 MSCO60682 206 aa18.06■□□□□ 0.48
NUP50-219ENST00000497960 PLA2G6O60733 806 aa18.06■□□□□ 0.48
NUP50-219ENST00000497960 OAZ1P54368 228 aa18.06■□□□□ 0.48
NUP50-219ENST00000497960 IMMTQ16891 758 aaKnown RBP18.06■□□□□ 0.48
NUP50-219ENST00000497960 CCDC96Q2M329 555 aa18.06■□□□□ 0.48
NUP50-219ENST00000497960 COL11A1P12107 1806 aaPredicted RBP18.06■□□□□ 0.48
NUP50-219ENST00000497960 ZNF236Q9UL36 1845 aa18.06■□□□□ 0.48
NUP50-219ENST00000497960 RAD50Q92878 1312 aa18.05■□□□□ 0.48
NUP50-219ENST00000497960 PGK2P07205 417 aa18.05■□□□□ 0.48
NUP50-219ENST00000497960 BMP2KLQ5H9B9 411 aa18.05■□□□□ 0.48
NUP50-219ENST00000497960 KCTD1Q719H9 257 aa18.05■□□□□ 0.48
NUP50-219ENST00000497960 DIS3LQ8TF46 1054 aaKnown RBP18.05■□□□□ 0.48
NUP50-219ENST00000497960 DCAF4Q8WV16 495 aa18.05■□□□□ 0.48
NUP50-219ENST00000497960 DDX11Q96FC9 970 aa18.05■□□□□ 0.48
NUP50-219ENST00000497960 MAML3Q96JK9 1138 aa18.05■□□□□ 0.48
NUP50-219ENST00000497960 TTC14Q96N46 770 aa18.05■□□□□ 0.48
NUP50-219ENST00000497960 TMEM47Q9BQJ4 181 aa18.05■□□□□ 0.48
NUP50-219ENST00000497960 FBXO40Q9UH90 709 aa18.05■□□□□ 0.48
NUP50-219ENST00000497960 DDX20Q9UHI6 824 aaKnown RBP18.05■□□□□ 0.48
NUP50-219ENST00000497960 DIS3Q9Y2L1 958 aaKnown RBP18.05■□□□□ 0.48
NUP50-219ENST00000497960 RIPK3Q9Y572 518 aa18.05■□□□□ 0.48
NUP50-219ENST00000497960 IGHA2P01877 340 aa18.04■□□□□ 0.48
NUP50-219ENST00000497960 CYBAP13498 195 aa18.04■□□□□ 0.48
NUP50-219ENST00000497960 CCDC178Q5BJE1 867 aa18.04■□□□□ 0.48
NUP50-219ENST00000497960 LHX8Q68G74 356 aa18.04■□□□□ 0.48
NUP50-219ENST00000497960 CHST13Q8NET6 341 aa18.04■□□□□ 0.48
NUP50-219ENST00000497960 NR2E3Q9Y5X4 410 aa18.04■□□□□ 0.48
NUP50-219ENST00000497960 NEDD4P46934 1319 aa18.03■□□□□ 0.48
NUP50-219ENST00000497960 H0YGN5 161 aa18.03■□□□□ 0.48
NUP50-219ENST00000497960 CHMLP26374 656 aa18.03■□□□□ 0.48
NUP50-219ENST00000497960 ZNF792Q3KQV3 632 aa18.03■□□□□ 0.48
NUP50-219ENST00000497960 IQCA1Q86XH1 822 aa18.03■□□□□ 0.48
NUP50-219ENST00000497960 TRPV1Q8NER1 839 aa18.03■□□□□ 0.48
NUP50-219ENST00000497960 C11orf49Q9H6J7 331 aa18.03■□□□□ 0.48
NUP50-219ENST00000497960 ZNFX1Q9P2E3 1918 aaKnown RBP18.02■□□□□ 0.48
NUP50-219ENST00000497960 EVI5O60447 810 aa18.02■□□□□ 0.48
NUP50-219ENST00000497960 KDM4AO75164 1064 aa18.02■□□□□ 0.48
NUP50-219ENST00000497960 ANKRD35Q8N283 1001 aa18.02■□□□□ 0.48
NUP50-219ENST00000497960 KRT23Q9C075 422 aa18.02■□□□□ 0.48
NUP50-219ENST00000497960 IL25Q9H293 177 aa18.02■□□□□ 0.48
NUP50-219ENST00000497960 NRBP1Q9UHY1 535 aa18.02■□□□□ 0.48
NUP50-219ENST00000497960 PRR12Q9ULL5 1215 aa18.02■□□□□ 0.48
NUP50-219ENST00000497960 SEPT4O43236 478 aa18.01■□□□□ 0.47
NUP50-219ENST00000497960 MNX1P50219 401 aaPredicted RBP18.01■□□□□ 0.47
NUP50-219ENST00000497960 TKFCQ3LXA3 575 aa18.01■□□□□ 0.47
NUP50-219ENST00000497960 CCDC174Q6PII3 467 aa18.01■□□□□ 0.47
NUP50-219ENST00000497960 RASGRP2Q7LDG7 609 aa18.01■□□□□ 0.47
NUP50-219ENST00000497960 DGKHQ86XP1 1220 aa18.01■□□□□ 0.47
NUP50-219ENST00000497960 TINF2Q9BSI4 451 aa18.01■□□□□ 0.47
NUP50-219ENST00000497960 ACAD9Q9H845 621 aa18.01■□□□□ 0.47
NUP50-219ENST00000497960 CNNM2Q9H8M5 875 aa18.01■□□□□ 0.47
NUP50-219ENST00000497960 HOMER2Q9NSB8 354 aa18.01■□□□□ 0.47
NUP50-219ENST00000497960 B4E1Z4 1266 aa18■□□□□ 0.47
NUP50-219ENST00000497960 PDHBP11177 359 aa18■□□□□ 0.47
NUP50-219ENST00000497960 PRAMEF19Q5SWL8 479 aa18■□□□□ 0.47
NUP50-219ENST00000497960 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms