RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 MYPNQ86TC9 1320 aa13.28□□□□□ -0.28
ERCC8-208ENST00000497892 COL11A1P12107 1806 aaPredicted RBP13.27□□□□□ -0.28
ERCC8-208ENST00000497892 F5H6K3 240 aa13.27□□□□□ -0.29
ERCC8-208ENST00000497892 PSMC4P43686 418 aa13.27□□□□□ -0.29
ERCC8-208ENST00000497892 FCGRTP55899 365 aa13.27□□□□□ -0.29
ERCC8-208ENST00000497892 KLRC3Q07444 240 aa13.27□□□□□ -0.29
ERCC8-208ENST00000497892 COG2Q14746 738 aa13.27□□□□□ -0.29
ERCC8-208ENST00000497892 CASC1Q6TDU7 716 aa13.27□□□□□ -0.29
ERCC8-208ENST00000497892 KIAA1211Q6ZU35 1233 aa13.27□□□□□ -0.29
ERCC8-208ENST00000497892 NKX2-3Q8TAU0 364 aa13.27□□□□□ -0.29
ERCC8-208ENST00000497892 ABHD8Q96I13 439 aa13.27□□□□□ -0.29
ERCC8-208ENST00000497892 LSG1Q9H089 658 aaKnown RBP13.27□□□□□ -0.29
ERCC8-208ENST00000497892 TCP11L1Q9NUJ3 509 aa13.27□□□□□ -0.29
ERCC8-208ENST00000497892 RBPJLQ9UBG7 517 aa13.27□□□□□ -0.29
ERCC8-208ENST00000497892 STX8Q9UNK0 236 aa13.27□□□□□ -0.29
ERCC8-208ENST00000497892 PTPN22Q9Y2R2 807 aa13.27□□□□□ -0.29
ERCC8-208ENST00000497892 RAD21O60216 631 aa13.26□□□□□ -0.29
ERCC8-208ENST00000497892 PEX10O60683 326 aa13.26□□□□□ -0.29
ERCC8-208ENST00000497892 FLOT1O75955 427 aa13.26□□□□□ -0.29
ERCC8-208ENST00000497892 CYP21A2P08686 494 aa13.26□□□□□ -0.29
ERCC8-208ENST00000497892 ERVK-9P63128 1117 aa13.26□□□□□ -0.29
ERCC8-208ENST00000497892 ERVK-24P63145 666 aa13.26□□□□□ -0.29
ERCC8-208ENST00000497892 FAM83BQ5T0W9 1011 aa13.26□□□□□ -0.29
ERCC8-208ENST00000497892 GPRC5AQ8NFJ5 357 aa13.26□□□□□ -0.29
ERCC8-208ENST00000497892 PAGR1Q9BTK6 254 aa13.26□□□□□ -0.29
ERCC8-208ENST00000497892 CNNM2Q9H8M5 875 aa13.26□□□□□ -0.29
ERCC8-208ENST00000497892 RABGAP1Q9Y3P9 1069 aa13.26□□□□□ -0.29
ERCC8-208ENST00000497892 RBM8AQ9Y5S9 174 aaKnown RBP13.26□□□□□ -0.29
ERCC8-208ENST00000497892 DOCK3Q8IZD9 2030 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 PLXNB2O15031 1838 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 CENPFP49454 3210 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 B4E1Z4 1266 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 TNPO2O14787 897 aaKnown RBP13.25□□□□□ -0.29
ERCC8-208ENST00000497892 KDM4AO75164 1064 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 CNMDO75829 334 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 FMNL1O95466 1100 aaPredicted RBP13.25□□□□□ -0.29
ERCC8-208ENST00000497892 PRMT2P55345 433 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 RCSD1Q6JBY9 416 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 GMCL1Q96IK5 515 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 NUP88Q99567 741 aaPredicted RBP13.25□□□□□ -0.29
ERCC8-208ENST00000497892 KRT23Q9C075 422 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 ANO2Q9NQ90 1003 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 FBXO28Q9NVF7 368 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 HOXC10Q9NYD6 342 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 SRRDQ9UH36 339 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 HPS5Q9UPZ3 1129 aa13.25□□□□□ -0.29
ERCC8-208ENST00000497892 TOP1P11387 765 aaKnown RBP13.24□□□□□ -0.29
ERCC8-208ENST00000497892 HOXD10P28358 340 aa13.24□□□□□ -0.29
ERCC8-208ENST00000497892 SLFN13Q68D06 897 aa13.24□□□□□ -0.29
ERCC8-208ENST00000497892 IQCA1Q86XH1 822 aa13.24□□□□□ -0.29
ERCC8-208ENST00000497892 MB21D1Q8N884 522 aa13.24□□□□□ -0.29
ERCC8-208ENST00000497892 OXER1Q8TDS5 423 aa13.24□□□□□ -0.29
ERCC8-208ENST00000497892 ATG4CQ96DT6 458 aa13.24□□□□□ -0.29
ERCC8-208ENST00000497892 TTC14Q96N46 770 aa13.24□□□□□ -0.29
ERCC8-208ENST00000497892 BTBD7Q9P203 1132 aa13.24□□□□□ -0.29
ERCC8-208ENST00000497892 PPP1R9AQ9ULJ8 1098 aa13.24□□□□□ -0.29
ERCC8-208ENST00000497892 ADAMTS5Q9UNA0 930 aa13.24□□□□□ -0.29
ERCC8-208ENST00000497892 TAF6LQ9Y6J9 622 aa13.24□□□□□ -0.29
ERCC8-208ENST00000497892 ZNF236Q9UL36 1845 aa13.24□□□□□ -0.29
ERCC8-208ENST00000497892 MAPK4P31152 587 aa13.23□□□□□ -0.29
ERCC8-208ENST00000497892 PRKCZQ05513 592 aa13.23□□□□□ -0.29
ERCC8-208ENST00000497892 Q3C1V9 767 aa13.23□□□□□ -0.29
ERCC8-208ENST00000497892 PPP1R15BQ5SWA1 713 aa13.23□□□□□ -0.29
ERCC8-208ENST00000497892 STOX1Q6ZVD7 989 aa13.23□□□□□ -0.29
ERCC8-208ENST00000497892 SLF1Q9BQI6 1058 aa13.23□□□□□ -0.29
ERCC8-208ENST00000497892 TMEM47Q9BQJ4 181 aa13.23□□□□□ -0.29
ERCC8-208ENST00000497892 PORCNQ9H237 461 aa13.23□□□□□ -0.29
ERCC8-208ENST00000497892 ZSWIM5Q9P217 1185 aa13.23□□□□□ -0.29
ERCC8-208ENST00000497892 PTCH2Q9Y6C5 1203 aa13.23□□□□□ -0.29
ERCC8-208ENST00000497892 E7EWF7 191 aa13.22□□□□□ -0.29
ERCC8-208ENST00000497892 BMP3P12645 472 aa13.22□□□□□ -0.29
ERCC8-208ENST00000497892 SLC1A4P43007 532 aa13.22□□□□□ -0.29
ERCC8-208ENST00000497892 CCNA1P78396 465 aa13.22□□□□□ -0.29
ERCC8-208ENST00000497892 TRDNQ13061 729 aa13.22□□□□□ -0.29
ERCC8-208ENST00000497892 NECTIN1Q15223 517 aa13.22□□□□□ -0.29
ERCC8-208ENST00000497892 CCDC178Q5BJE1 867 aa13.22□□□□□ -0.29
ERCC8-208ENST00000497892 RASGRP2Q7LDG7 609 aa13.22□□□□□ -0.29
ERCC8-208ENST00000497892 DGKHQ86XP1 1220 aa13.22□□□□□ -0.29
ERCC8-208ENST00000497892 ENAHQ8N8S7 591 aaPredicted RBP13.22□□□□□ -0.29
ERCC8-208ENST00000497892 COA7Q96BR5 231 aa13.22□□□□□ -0.29
ERCC8-208ENST00000497892 ZSCAN10Q96SZ4 725 aaPredicted RBP13.22□□□□□ -0.29
ERCC8-208ENST00000497892 ZKSCAN3Q9BRR0 538 aa13.22□□□□□ -0.29
ERCC8-208ENST00000497892 FEM1BQ9UK73 627 aa13.22□□□□□ -0.29
ERCC8-208ENST00000497892 RBBP6Q7Z6E9 1792 aaKnown RBP13.22□□□□□ -0.29
ERCC8-208ENST00000497892 TNKSO95271 1327 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 VWA5AO00534 786 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 ARHGAP33O14559 1287 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 SLC27A2O14975 620 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 MCCP23508 829 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 FLT3LGP49771 235 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 STAT2P52630 851 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 IRF5Q13568 498 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 RALYLQ86SE5 291 aaKnown RBP13.21□□□□□ -0.29
ERCC8-208ENST00000497892 PRPF38AQ8NAV1 312 aaKnown RBP13.21□□□□□ -0.29
ERCC8-208ENST00000497892 REPS2Q8NFH8 660 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 NCOA7Q8NI08 942 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 DCAF4Q8WV16 495 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 ANKS1AQ92625 1134 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 ARMC5Q96C12 935 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 UBAC1Q9BSL1 405 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms