RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 CCT2P78371 535 aaKnown RBP13.87□□□□□ -0.19
CUX1-210ENST00000497815 GPATCH4Q5T3I0 446 aaKnown RBP13.87□□□□□ -0.19
CUX1-210ENST00000497815 CHURC1Q8WUH1 139 aa13.87□□□□□ -0.19
CUX1-210ENST00000497815 PAGR1Q9BTK6 254 aa13.87□□□□□ -0.19
CUX1-210ENST00000497815 ALDH8A1Q9H2A2 487 aaPredicted RBP13.87□□□□□ -0.19
CUX1-210ENST00000497815 R3HDMLQ9H3Y0 253 aa13.87□□□□□ -0.19
CUX1-210ENST00000497815 ZFYVE28Q9HCC9 887 aa13.87□□□□□ -0.19
CUX1-210ENST00000497815 CPA4Q9UI42 421 aa13.87□□□□□ -0.19
CUX1-210ENST00000497815 TSKSQ9UJT2 592 aa13.87□□□□□ -0.19
CUX1-210ENST00000497815 PPP1R9AQ9ULJ8 1098 aa13.87□□□□□ -0.19
CUX1-210ENST00000497815 TPCN1Q9ULQ1 816 aa13.87□□□□□ -0.19
CUX1-210ENST00000497815 PALM3A6NDB9 673 aaPredicted RBP13.86□□□□□ -0.19
CUX1-210ENST00000497815 SPDYE16A6NNV3 312 aaPredicted RBP13.86□□□□□ -0.19
CUX1-210ENST00000497815 CA12O43570 354 aa13.86□□□□□ -0.19
CUX1-210ENST00000497815 ST18O60284 1047 aa13.86□□□□□ -0.19
CUX1-210ENST00000497815 PLEKHA8P1O95397 391 aa13.86□□□□□ -0.19
CUX1-210ENST00000497815 PDIA3P30101 505 aaKnown RBP13.86□□□□□ -0.19
CUX1-210ENST00000497815 KIF5BP33176 963 aa13.86□□□□□ -0.19
CUX1-210ENST00000497815 RTN1Q16799 776 aa13.86□□□□□ -0.19
CUX1-210ENST00000497815 SYDE2Q5VT97 1194 aa13.86□□□□□ -0.19
CUX1-210ENST00000497815 FAM160B2Q86V87 743 aa13.86□□□□□ -0.19
CUX1-210ENST00000497815 CMTR1Q8N1G2 835 aaKnown RBP13.86□□□□□ -0.19
CUX1-210ENST00000497815 PRPF38AQ8NAV1 312 aaKnown RBP13.86□□□□□ -0.19
CUX1-210ENST00000497815 FANCBQ8NB91 859 aa13.86□□□□□ -0.19
CUX1-210ENST00000497815 VAT1LQ9HCJ6 419 aa13.86□□□□□ -0.19
CUX1-210ENST00000497815 HOXC10Q9NYD6 342 aa13.86□□□□□ -0.19
CUX1-210ENST00000497815 PRR12Q9ULL5 1215 aa13.86□□□□□ -0.19
CUX1-210ENST00000497815 HPS5Q9UPZ3 1129 aa13.86□□□□□ -0.19
CUX1-210ENST00000497815 CTDP1Q9Y5B0 961 aaPredicted RBP13.86□□□□□ -0.19
CUX1-210ENST00000497815 ECM2O94769 699 aaPredicted RBP13.85□□□□□ -0.19
CUX1-210ENST00000497815 SLC4A3P48751 1232 aa13.85□□□□□ -0.19
CUX1-210ENST00000497815 EVCP57679 992 aa13.85□□□□□ -0.19
CUX1-210ENST00000497815 NBPF11Q86T75 865 aa13.85□□□□□ -0.19
CUX1-210ENST00000497815 CCDC82Q8N4S0 544 aa13.85□□□□□ -0.19
CUX1-210ENST00000497815 ANKRD13CQ8N6S4 541 aa13.85□□□□□ -0.19
CUX1-210ENST00000497815 PIBF1Q8WXW3 757 aa13.85□□□□□ -0.19
CUX1-210ENST00000497815 MAP3K14Q99558 947 aa13.85□□□□□ -0.19
CUX1-210ENST00000497815 NCOA5Q9HCD5 579 aaKnown RBP13.85□□□□□ -0.19
CUX1-210ENST00000497815 WBP1LQ9NX94 342 aa13.85□□□□□ -0.19
CUX1-210ENST00000497815 VWA5AO00534 786 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 TLR2O60603 784 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 ZBED4O75132 1171 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 CD2BP2O95400 341 aaKnown RBP13.84□□□□□ -0.19
CUX1-210ENST00000497815 LARGE1O95461 756 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 CDC27P30260 824 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 ADD1P35611 737 aaKnown RBP13.84□□□□□ -0.19
CUX1-210ENST00000497815 PLS1Q14651 629 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 ME3Q16798 604 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 CCDC174Q6PII3 467 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 POTEEQ6S8J3 1075 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 BTNL9Q6UXG8 535 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 ADGRF4Q8IZF3 695 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 NECAB1Q8N987 351 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 JMYQ8N9B5 988 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 ZNF274Q96GC6 653 aaPredicted RBP13.84□□□□□ -0.19
CUX1-210ENST00000497815 SLKQ9H2G2 1235 aaPredicted RBP13.84□□□□□ -0.19
CUX1-210ENST00000497815 TXNRD2Q9NNW7 524 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 RBM28Q9NW13 759 aaKnown RBP13.84□□□□□ -0.19
CUX1-210ENST00000497815 BTBD7Q9P203 1132 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 LIMCH1Q9UPQ0 1083 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 MYPNQ86TC9 1320 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 ADGRA2Q96PE1 1338 aa13.84□□□□□ -0.19
CUX1-210ENST00000497815 PLA2G6O60733 806 aa13.83□□□□□ -0.2
CUX1-210ENST00000497815 PPFIA3O75145 1194 aa13.83□□□□□ -0.2
CUX1-210ENST00000497815 CNMDO75829 334 aa13.83□□□□□ -0.2
CUX1-210ENST00000497815 GCLCP48506 637 aaPredicted RBP13.83□□□□□ -0.2
CUX1-210ENST00000497815 GNAQP50148 359 aa13.83□□□□□ -0.2
CUX1-210ENST00000497815 SLC35G1Q2M3R5 365 aa13.83□□□□□ -0.2
CUX1-210ENST00000497815 TMTC3Q6ZXV5 915 aa13.83□□□□□ -0.2
CUX1-210ENST00000497815 HOMER1Q86YM7 354 aa13.83□□□□□ -0.2
CUX1-210ENST00000497815 CPXCR1Q8N123 301 aa13.83□□□□□ -0.2
CUX1-210ENST00000497815 SRBD1Q8N5C6 995 aaKnown RBP13.83□□□□□ -0.2
CUX1-210ENST00000497815 JMJD4Q9H9V9 463 aa13.83□□□□□ -0.2
CUX1-210ENST00000497815 RAVER2Q9HCJ3 691 aaKnown RBP13.83□□□□□ -0.2
CUX1-210ENST00000497815 FAM217BQ9NTX9 383 aaPredicted RBP13.83□□□□□ -0.2
CUX1-210ENST00000497815 SAGE1Q9NXZ1 904 aa13.83□□□□□ -0.2
CUX1-210ENST00000497815 RBPJLQ9UBG7 517 aa13.83□□□□□ -0.2
CUX1-210ENST00000497815 CCDC196A0A1B0GTZ2 297 aa13.82□□□□□ -0.2
CUX1-210ENST00000497815 CYTH3O43739 400 aa13.82□□□□□ -0.2
CUX1-210ENST00000497815 PFKFB2O60825 505 aa13.82□□□□□ -0.2
CUX1-210ENST00000497815 DTNBO60941 627 aa13.82□□□□□ -0.2
CUX1-210ENST00000497815 TAL1P17542 331 aaPredicted RBP13.82□□□□□ -0.2
CUX1-210ENST00000497815 RCAN1P53805 252 aa13.82□□□□□ -0.2
CUX1-210ENST00000497815 SCRN1Q12765 414 aa13.82□□□□□ -0.2
CUX1-210ENST00000497815 TMEM132BQ14DG7 1078 aa13.82□□□□□ -0.2
CUX1-210ENST00000497815 CDC37Q16543 378 aaPredicted RBP13.82□□□□□ -0.2
CUX1-210ENST00000497815 C17orf99Q6UX52 265 aa13.82□□□□□ -0.2
CUX1-210ENST00000497815 LBX2Q6XYB7 198 aa13.82□□□□□ -0.2
CUX1-210ENST00000497815 GPRC5AQ8NFJ5 357 aa13.82□□□□□ -0.2
CUX1-210ENST00000497815 GTF3C2Q8WUA4 911 aaPredicted RBP13.82□□□□□ -0.2
CUX1-210ENST00000497815 LZTS2Q9BRK4 669 aa13.82□□□□□ -0.2
CUX1-210ENST00000497815 SLC38A10Q9HBR0 1119 aa13.82□□□□□ -0.2
CUX1-210ENST00000497815 ADAMTS5Q9UNA0 930 aa13.82□□□□□ -0.2
CUX1-210ENST00000497815 RABGAP1Q9Y3P9 1069 aa13.82□□□□□ -0.2
CUX1-210ENST00000497815 hCG_1642624A0A1W2PR95 340 aa13.81□□□□□ -0.2
CUX1-210ENST00000497815 CPLX1O14810 134 aa13.81□□□□□ -0.2
CUX1-210ENST00000497815 HSPA1AP0DMV8 641 aaKnown RBP13.81□□□□□ -0.2
CUX1-210ENST00000497815 HSPA1BP0DMV9 641 aaKnown RBP13.81□□□□□ -0.2
CUX1-210ENST00000497815 BCRP11274 1271 aa13.81□□□□□ -0.2
CUX1-210ENST00000497815 ERVK-9P63128 1117 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms