RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 ZNF280AP59817 542 aaPredicted RBP9.96□□□□□ -0.82
VPS45-210ENST00000497638 U2AF1Q01081 240 aaKnown RBP eCLIP9.96□□□□□ -0.82
VPS45-210ENST00000497638 ANGEL2Q5VTE6 544 aaKnown RBP9.96□□□□□ -0.82
VPS45-210ENST00000497638 GDF6Q6KF10 455 aaPredicted RBP9.96□□□□□ -0.82
VPS45-210ENST00000497638 PLD4Q96BZ4 506 aa9.96□□□□□ -0.82
VPS45-210ENST00000497638 NSUN5Q96P11 429 aaKnown RBP9.96□□□□□ -0.82
VPS45-210ENST00000497638 ZFP64Q9NPA5 681 aa9.96□□□□□ -0.82
VPS45-210ENST00000497638 KCNMB2Q9Y691 235 aa9.96□□□□□ -0.82
VPS45-210ENST00000497638 ASTN2O75129 1339 aaPredicted RBP9.96□□□□□ -0.82
VPS45-210ENST00000497638 SH3TC1Q8TE82 1336 aa9.96□□□□□ -0.82
VPS45-210ENST00000497638 SCN9AQ15858 1988 aa9.95□□□□□ -0.82
VPS45-210ENST00000497638 CENPFP49454 3210 aa9.95□□□□□ -0.82
VPS45-210ENST00000497638 MMP20O60882 483 aa9.95□□□□□ -0.82
VPS45-210ENST00000497638 ARTNQ5T4W7 220 aa9.95□□□□□ -0.82
VPS45-210ENST00000497638 C16orf46Q6P387 395 aa9.95□□□□□ -0.82
VPS45-210ENST00000497638 NLRP10Q86W26 655 aa9.95□□□□□ -0.82
VPS45-210ENST00000497638 AGBL3Q8NEM8 1001 aa9.95□□□□□ -0.82
VPS45-210ENST00000497638 TRMT112Q9UI30 125 aaKnown RBP9.95□□□□□ -0.82
VPS45-210ENST00000497638 TAF1P21675 1872 aa9.95□□□□□ -0.82
VPS45-210ENST00000497638 NOS3P29474 1203 aa9.94□□□□□ -0.82
VPS45-210ENST00000497638 LRP10Q7Z4F1 713 aa9.94□□□□□ -0.82
VPS45-210ENST00000497638 ETFBKMTQ8IXQ9 262 aa9.94□□□□□ -0.82
VPS45-210ENST00000497638 SSBP4Q9BWG4 385 aaPredicted RBP9.94□□□□□ -0.82
VPS45-210ENST00000497638 SAP130Q9H0E3 1048 aa9.94□□□□□ -0.82
VPS45-210ENST00000497638 KCNQ5Q9NR82 932 aa9.94□□□□□ -0.82
VPS45-210ENST00000497638 POLLQ9UGP5 575 aa9.94□□□□□ -0.82
VPS45-210ENST00000497638 ZMIZ1Q9ULJ6 1067 aa9.94□□□□□ -0.82
VPS45-210ENST00000497638 BRCA2P51587 3418 aa9.93□□□□□ -0.82
VPS45-210ENST00000497638 UBE2Q2LH0YL09 131 aa9.93□□□□□ -0.82
VPS45-210ENST00000497638 NF2P35240 595 aa9.93□□□□□ -0.82
VPS45-210ENST00000497638 ELOAQ14241 798 aaKnown RBP9.93□□□□□ -0.82
VPS45-210ENST00000497638 MOB2Q70IA6 237 aa9.93□□□□□ -0.82
VPS45-210ENST00000497638 NBPF11Q86T75 865 aa9.93□□□□□ -0.82
VPS45-210ENST00000497638 IL22RA1Q8N6P7 574 aa9.93□□□□□ -0.82
VPS45-210ENST00000497638 MKNK1Q9BUB5 465 aa9.93□□□□□ -0.82
VPS45-210ENST00000497638 TRIM17Q9Y577 477 aa9.93□□□□□ -0.82
VPS45-210ENST00000497638 PSME4Q14997 1843 aa9.93□□□□□ -0.82
VPS45-210ENST00000497638 DLG5Q8TDM6 1919 aa9.92□□□□□ -0.82
VPS45-210ENST00000497638 DEAF1O75398 565 aaPredicted RBP9.92□□□□□ -0.82
VPS45-210ENST00000497638 NEFMP07197 916 aa9.92□□□□□ -0.82
VPS45-210ENST00000497638 GPSM2P81274 684 aa9.92□□□□□ -0.82
VPS45-210ENST00000497638 TCIRG1Q13488 830 aa9.92□□□□□ -0.82
VPS45-210ENST00000497638 SF3B3Q15393 1217 aaKnown RBP9.92□□□□□ -0.82
VPS45-210ENST00000497638 OTOP1Q7RTM1 612 aa9.92□□□□□ -0.82
VPS45-210ENST00000497638 TBC1D16Q8TBP0 767 aa9.92□□□□□ -0.82
VPS45-210ENST00000497638 STK32AQ8WU08 396 aa9.92□□□□□ -0.82
VPS45-210ENST00000497638 CELF1Q92879 486 aaKnown RBP9.92□□□□□ -0.82
VPS45-210ENST00000497638 ARMC5Q96C12 935 aa9.92□□□□□ -0.82
VPS45-210ENST00000497638 THUMPD2Q9BTF0 503 aaKnown RBP9.92□□□□□ -0.82
VPS45-210ENST00000497638 ZC3H12CQ9C0D7 883 aaKnown RBP9.92□□□□□ -0.82
VPS45-210ENST00000497638 MYOZ2Q9NPC6 264 aa9.92□□□□□ -0.82
VPS45-210ENST00000497638 SOX18P35713 384 aa9.91□□□□□ -0.82
VPS45-210ENST00000497638 NAA30Q147X3 362 aaPredicted RBP9.91□□□□□ -0.82
VPS45-210ENST00000497638 OCLNQ16625 522 aa9.91□□□□□ -0.82
VPS45-210ENST00000497638 PIK3R5Q8WYR1 880 aa9.91□□□□□ -0.82
VPS45-210ENST00000497638 GMLQ99445 158 aa9.91□□□□□ -0.82
VPS45-210ENST00000497638 R3HDMLQ9H3Y0 253 aa9.91□□□□□ -0.82
VPS45-210ENST00000497638 FAM13BQ9NYF5 915 aa9.91□□□□□ -0.82
VPS45-210ENST00000497638 PODXL2Q9NZ53 605 aa9.91□□□□□ -0.82
VPS45-210ENST00000497638 SZT2Q5T011 3432 aa9.91□□□□□ -0.82
VPS45-210ENST00000497638 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.9□□□□□ -0.82
VPS45-210ENST00000497638 MANSC4A6NHS7 340 aaPredicted RBP9.9□□□□□ -0.82
VPS45-210ENST00000497638 DLL1O00548 723 aa9.9□□□□□ -0.82
VPS45-210ENST00000497638 UFL1O94874 794 aa9.9□□□□□ -0.82
VPS45-210ENST00000497638 INHBEP58166 350 aa9.9□□□□□ -0.82
VPS45-210ENST00000497638 CNGB1Q14028 1251 aaPredicted RBP9.9□□□□□ -0.82
VPS45-210ENST00000497638 PROSER3Q2NL68 480 aa9.9□□□□□ -0.82
VPS45-210ENST00000497638 ARMC9Q7Z3E5 817 aa9.9□□□□□ -0.82
VPS45-210ENST00000497638 ERO1AQ96HE7 468 aa9.9□□□□□ -0.82
VPS45-210ENST00000497638 PTPN22Q9Y2R2 807 aa9.9□□□□□ -0.82
VPS45-210ENST00000497638 A0A0C4DFX4 3053 aa9.89□□□□□ -0.83
VPS45-210ENST00000497638 EN2P19622 333 aaPredicted RBP9.89□□□□□ -0.83
VPS45-210ENST00000497638 EIF2S2P20042 333 aaKnown RBP9.89□□□□□ -0.83
VPS45-210ENST00000497638 RPS8P62241 208 aaKnown RBP9.89□□□□□ -0.83
VPS45-210ENST00000497638 COPS6Q7L5N1 327 aa9.89□□□□□ -0.83
VPS45-210ENST00000497638 XAGE3Q8WTP9 111 aa9.89□□□□□ -0.83
VPS45-210ENST00000497638 COL26A1Q96A83 441 aa9.89□□□□□ -0.83
VPS45-210ENST00000497638 MEGF10Q96KG7 1140 aa9.89□□□□□ -0.83
VPS45-210ENST00000497638 AKTIPQ9H8T0 292 aa9.89□□□□□ -0.83
VPS45-210ENST00000497638 LAMB1P07942 1786 aa9.88□□□□□ -0.83
VPS45-210ENST00000497638 RANBP2P49792 3224 aaKnown RBP9.88□□□□□ -0.83
VPS45-210ENST00000497638 COL4A1P02462 1669 aa9.88□□□□□ -0.83
VPS45-210ENST00000497638 ANXA1P04083 346 aa9.88□□□□□ -0.83
VPS45-210ENST00000497638 PTPN12Q05209 780 aaKnown RBP9.88□□□□□ -0.83
VPS45-210ENST00000497638 TRIP4Q15650 581 aaPredicted RBP9.88□□□□□ -0.83
VPS45-210ENST00000497638 LDLRAD1Q5T700 205 aa9.88□□□□□ -0.83
VPS45-210ENST00000497638 PRAMEF18Q5VWM3 479 aa9.88□□□□□ -0.83
VPS45-210ENST00000497638 CAPN12Q6ZSI9 719 aa9.88□□□□□ -0.83
VPS45-210ENST00000497638 PSMG3-AS1Q96PY0 264 aa9.88□□□□□ -0.83
VPS45-210ENST00000497638 MRPL18Q9H0U6 180 aaKnown RBP9.88□□□□□ -0.83
VPS45-210ENST00000497638 CXXC1Q9P0U4 656 aaPredicted RBP9.88□□□□□ -0.83
VPS45-210ENST00000497638 TSPYL4Q9UJ04 414 aa9.88□□□□□ -0.83
VPS45-210ENST00000497638 COL1A1P02452 1464 aaPredicted RBP9.87□□□□□ -0.83
VPS45-210ENST00000497638 ALX3O95076 343 aa9.87□□□□□ -0.83
VPS45-210ENST00000497638 ZBTB48P10074 688 aaPredicted RBP9.87□□□□□ -0.83
VPS45-210ENST00000497638 MMP14P50281 582 aa9.87□□□□□ -0.83
VPS45-210ENST00000497638 AIMP1Q12904 312 aaKnown RBP9.87□□□□□ -0.83
VPS45-210ENST00000497638 LRP8Q14114 963 aa9.87□□□□□ -0.83
VPS45-210ENST00000497638 NFE2L2Q16236 605 aa9.87□□□□□ -0.83
VPS45-210ENST00000497638 NBPF9Q3BBW0 867 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms