RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 TNPO1Q92973 898 aaKnown RBP16.45■□□□□ 0.22
VPS26A-209ENST00000497564 PHKBQ93100 1093 aa16.45■□□□□ 0.22
VPS26A-209ENST00000497564 RBM27Q9P2N5 1060 aaKnown RBP16.45■□□□□ 0.22
VPS26A-209ENST00000497564 BTBD19C9JJ37 291 aa16.44■□□□□ 0.22
VPS26A-209ENST00000497564 PRPF3O43395 683 aaKnown RBP16.44■□□□□ 0.22
VPS26A-209ENST00000497564 CTNND1O60716 968 aaKnown RBP16.44■□□□□ 0.22
VPS26A-209ENST00000497564 DTNBO60941 627 aa16.44■□□□□ 0.22
VPS26A-209ENST00000497564 PLEKHA8P1O95397 391 aa16.44■□□□□ 0.22
VPS26A-209ENST00000497564 DEXIO95424 95 aa16.44■□□□□ 0.22
VPS26A-209ENST00000497564 ALDH1A1P00352 501 aa16.44■□□□□ 0.22
VPS26A-209ENST00000497564 PARP1P09874 1014 aaKnown RBP16.44■□□□□ 0.22
VPS26A-209ENST00000497564 PTPRAP18433 802 aa16.44■□□□□ 0.22
VPS26A-209ENST00000497564 CAP1Q01518 475 aa16.44■□□□□ 0.22
VPS26A-209ENST00000497564 SNAPC2Q13487 334 aa16.44■□□□□ 0.22
VPS26A-209ENST00000497564 ASPRV1Q53RT3 343 aa16.44■□□□□ 0.22
VPS26A-209ENST00000497564 LRRC47Q8N1G4 583 aaKnown RBP16.44■□□□□ 0.22
VPS26A-209ENST00000497564 GMCL1P1Q8NEA9 526 aa16.44■□□□□ 0.22
VPS26A-209ENST00000497564 SLC26A6Q9BXS9 759 aa16.44■□□□□ 0.22
VPS26A-209ENST00000497564 KCNH4Q9UQ05 1017 aa16.44■□□□□ 0.22
VPS26A-209ENST00000497564 ZHX2Q9Y6X8 837 aa16.44■□□□□ 0.22
VPS26A-209ENST00000497564 CETPP11597 493 aa16.43■□□□□ 0.22
VPS26A-209ENST00000497564 SRBD1Q8N5C6 995 aaKnown RBP16.43■□□□□ 0.22
VPS26A-209ENST00000497564 DCAF4Q8WV16 495 aa16.43■□□□□ 0.22
VPS26A-209ENST00000497564 SPZ1Q9BXG8 430 aa16.43■□□□□ 0.22
VPS26A-209ENST00000497564 ARHGEF10LQ9HCE6 1279 aa16.43■□□□□ 0.22
VPS26A-209ENST00000497564 USP17L5A8MUK1 530 aa16.42■□□□□ 0.22
VPS26A-209ENST00000497564 FKTNO75072 461 aa16.42■□□□□ 0.22
VPS26A-209ENST00000497564 F13A1P00488 732 aa16.42■□□□□ 0.22
VPS26A-209ENST00000497564 NOM1Q5C9Z4 860 aaKnown RBP16.42■□□□□ 0.22
VPS26A-209ENST00000497564 GPATCH4Q5T3I0 446 aaKnown RBP16.42■□□□□ 0.22
VPS26A-209ENST00000497564 STAG2Q8N3U4 1231 aa16.42■□□□□ 0.22
VPS26A-209ENST00000497564 FBXO18Q8NFZ0 1043 aa16.42■□□□□ 0.22
VPS26A-209ENST00000497564 C8orf76Q96K31 380 aa16.42■□□□□ 0.22
VPS26A-209ENST00000497564 ALG1Q9BT22 464 aa16.42■□□□□ 0.22
VPS26A-209ENST00000497564 PICK1Q9NRD5 415 aa16.42■□□□□ 0.22
VPS26A-209ENST00000497564 VPS37CA5D8V6 355 aaPredicted RBP16.41■□□□□ 0.22
VPS26A-209ENST00000497564 KLRF2D3W0D1 207 aa16.41■□□□□ 0.22
VPS26A-209ENST00000497564 H3BQV1 296 aa16.41■□□□□ 0.22
VPS26A-209ENST00000497564 ATP2B2Q01814 1243 aa16.41■□□□□ 0.22
VPS26A-209ENST00000497564 AKAP17AQ02040 695 aaKnown RBP16.41■□□□□ 0.22
VPS26A-209ENST00000497564 ZNF543Q08ER8 600 aa16.41■□□□□ 0.22
VPS26A-209ENST00000497564 TAF1CQ15572 869 aaPredicted RBP16.41■□□□□ 0.22
VPS26A-209ENST00000497564 OTUD7BQ6GQQ9 843 aa16.41■□□□□ 0.22
VPS26A-209ENST00000497564 USP17L2Q6R6M4 530 aa16.41■□□□□ 0.22
VPS26A-209ENST00000497564 CTU1Q7Z7A3 348 aaKnown RBP16.41■□□□□ 0.22
VPS26A-209ENST00000497564 CMTR1Q8N1G2 835 aaKnown RBP16.41■□□□□ 0.22
VPS26A-209ENST00000497564 GMCL1Q96IK5 515 aa16.41■□□□□ 0.22
VPS26A-209ENST00000497564 SH2D4AQ9H788 454 aa16.41■□□□□ 0.22
VPS26A-209ENST00000497564 TMX2Q9Y320 296 aa16.41■□□□□ 0.22
VPS26A-209ENST00000497564 AFG3L2Q9Y4W6 797 aa16.41■□□□□ 0.22
VPS26A-209ENST00000497564 A0A1W2PRG0 241 aa16.4■□□□□ 0.22
VPS26A-209ENST00000497564 PPFIA3O75145 1194 aa16.4■□□□□ 0.22
VPS26A-209ENST00000497564 PKN1Q16512 942 aa16.4■□□□□ 0.22
VPS26A-209ENST00000497564 GPAT2Q6NUI2 795 aa16.4■□□□□ 0.22
VPS26A-209ENST00000497564 FAM177A1Q8N128 213 aaPredicted RBP16.4■□□□□ 0.22
VPS26A-209ENST00000497564 GBP4Q96PP9 640 aa16.4■□□□□ 0.22
VPS26A-209ENST00000497564 RIOX1Q9H6W3 641 aa16.4■□□□□ 0.22
VPS26A-209ENST00000497564 ATP6V1DQ9Y5K8 247 aa16.4■□□□□ 0.22
VPS26A-209ENST00000497564 BRCA2P51587 3418 aa16.39■□□□□ 0.22
VPS26A-209ENST00000497564 TRIM75PA6NK02 468 aa16.39■□□□□ 0.21
VPS26A-209ENST00000497564 F5H6K3 240 aa16.39■□□□□ 0.21
VPS26A-209ENST00000497564 CYTH3O43739 400 aa16.39■□□□□ 0.21
VPS26A-209ENST00000497564 KLRC3Q07444 240 aa16.39■□□□□ 0.21
VPS26A-209ENST00000497564 PFKFB3Q16875 520 aaPredicted RBP16.39■□□□□ 0.21
VPS26A-209ENST00000497564 SLC35G1Q2M3R5 365 aa16.39■□□□□ 0.21
VPS26A-209ENST00000497564 SLFN13Q68D06 897 aa16.39■□□□□ 0.21
VPS26A-209ENST00000497564 RASGRP2Q7LDG7 609 aa16.39■□□□□ 0.21
VPS26A-209ENST00000497564 CCDC82Q8N4S0 544 aa16.39■□□□□ 0.21
VPS26A-209ENST00000497564 CD99L2Q8TCZ2 262 aa16.39■□□□□ 0.21
VPS26A-209ENST00000497564 ZSCAN16Q9H4T2 348 aaPredicted RBP16.39■□□□□ 0.21
VPS26A-209ENST00000497564 GOPCQ9HD26 462 aa16.39■□□□□ 0.21
VPS26A-209ENST00000497564 V9GY48 417 aaPredicted RBP16.39■□□□□ 0.21
VPS26A-209ENST00000497564 RLFQ13129 1914 aa16.39■□□□□ 0.21
VPS26A-209ENST00000497564 LOC285556D6RIA3 1793 aa16.38■□□□□ 0.21
VPS26A-209ENST00000497564 ZSWIM8A7E2V4 1837 aa16.38■□□□□ 0.21
VPS26A-209ENST00000497564 A0A0G2JLL6 359 aaPredicted RBP16.38■□□□□ 0.21
VPS26A-209ENST00000497564 PDHXO00330 501 aa16.38■□□□□ 0.21
VPS26A-209ENST00000497564 CXCL11O14625 94 aa16.38■□□□□ 0.21
VPS26A-209ENST00000497564 BAG4O95429 457 aaKnown RBP16.38■□□□□ 0.21
VPS26A-209ENST00000497564 NDUFB10O96000 172 aa16.38■□□□□ 0.21
VPS26A-209ENST00000497564 RESTQ13127 1097 aa16.38■□□□□ 0.21
VPS26A-209ENST00000497564 PRRT2Q7Z6L0 340 aaPredicted RBP16.38■□□□□ 0.21
VPS26A-209ENST00000497564 AIFM3Q96NN9 605 aa16.38■□□□□ 0.21
VPS26A-209ENST00000497564 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
VPS26A-209ENST00000497564 ZFYVE28Q9HCC9 887 aa16.38■□□□□ 0.21
VPS26A-209ENST00000497564 MTMR7Q9Y216 660 aa16.38■□□□□ 0.21
VPS26A-209ENST00000497564 CCDC85CA6NKD9 419 aa16.37■□□□□ 0.21
VPS26A-209ENST00000497564 GOLGA8HP0CJ92 632 aa16.37■□□□□ 0.21
VPS26A-209ENST00000497564 SCG2P13521 617 aa16.37■□□□□ 0.21
VPS26A-209ENST00000497564 XBP1P17861 261 aa16.37■□□□□ 0.21
VPS26A-209ENST00000497564 SLC1A4P43007 532 aa16.37■□□□□ 0.21
VPS26A-209ENST00000497564 TRIM29Q14134 588 aa16.37■□□□□ 0.21
VPS26A-209ENST00000497564 KRT40Q6A162 431 aa16.37■□□□□ 0.21
VPS26A-209ENST00000497564 ANKRD23Q86SG2 305 aa16.37■□□□□ 0.21
VPS26A-209ENST00000497564 ACER1Q8TDN7 264 aa16.37■□□□□ 0.21
VPS26A-209ENST00000497564 VCPKMTQ9H867 229 aa16.37■□□□□ 0.21
VPS26A-209ENST00000497564 SH3GLB2Q9NR46 395 aa16.37■□□□□ 0.21
VPS26A-209ENST00000497564 COL11A1P12107 1806 aaPredicted RBP16.36■□□□□ 0.21
VPS26A-209ENST00000497564 hCG_1984214I3L0E3 225 aa16.36■□□□□ 0.21
VPS26A-209ENST00000497564 TLR2O60603 784 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms