RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 FAM184AQ8NB25 1140 aa12.14□□□□□ -0.47
USP13-205ENST00000497380 CNKSR2Q8WXI2 1034 aa12.14□□□□□ -0.47
USP13-205ENST00000497380 RRP36Q96EU6 259 aaKnown RBP12.14□□□□□ -0.47
USP13-205ENST00000497380 TANGO6Q9C0B7 1094 aa12.14□□□□□ -0.47
USP13-205ENST00000497380 RPAP3Q9H6T3 665 aaPredicted RBP12.14□□□□□ -0.47
USP13-205ENST00000497380 HOXC10Q9NYD6 342 aa12.14□□□□□ -0.47
USP13-205ENST00000497380 SEC63Q9UGP8 760 aaKnown RBP12.14□□□□□ -0.47
USP13-205ENST00000497380 PNMA2Q9UL42 364 aa12.14□□□□□ -0.47
USP13-205ENST00000497380 CTDP1Q9Y5B0 961 aaPredicted RBP12.14□□□□□ -0.47
USP13-205ENST00000497380 MYPNQ86TC9 1320 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 STK36Q9NRP7 1315 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 PTPDC1A2A3K4 754 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 hCG_1984214I3L0E3 225 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 PRPF3O43395 683 aaKnown RBP12.13□□□□□ -0.47
USP13-205ENST00000497380 FLOT1O75955 427 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 DEXIO95424 95 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 FMNL1O95466 1100 aaPredicted RBP12.13□□□□□ -0.47
USP13-205ENST00000497380 SLC10A3P09131 477 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 OSBPP22059 807 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 HOXA7P31268 230 aaPredicted RBP12.13□□□□□ -0.47
USP13-205ENST00000497380 COG2Q14746 738 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 NTRK3Q16288 839 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 OTUD7BQ6GQQ9 843 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 RASAL3Q86YV0 1011 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
USP13-205ENST00000497380 CCDC82Q8N4S0 544 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 SRBD1Q8N5C6 995 aaKnown RBP12.13□□□□□ -0.47
USP13-205ENST00000497380 ZNF713Q8N859 430 aaPredicted RBP12.13□□□□□ -0.47
USP13-205ENST00000497380 NSUN7Q8NE18 718 aaKnown RBP12.13□□□□□ -0.47
USP13-205ENST00000497380 SMARCC2Q8TAQ2 1214 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 UBA5Q9GZZ9 404 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 RIOX1Q9H6W3 641 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 PNMA3Q9UL41 463 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 AGTPBP1Q9UPW5 1226 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 SLC45A1Q9Y2W3 748 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 PHIPQ8WWQ0 1821 aa12.13□□□□□ -0.47
USP13-205ENST00000497380 CCL15-CCL14A0A0B4J2E2 113 aa12.12□□□□□ -0.47
USP13-205ENST00000497380 FOXN1O15353 648 aa12.12□□□□□ -0.47
USP13-205ENST00000497380 ZBED4O75132 1171 aa12.12□□□□□ -0.47
USP13-205ENST00000497380 PLEKHA8P1O95397 391 aa12.12□□□□□ -0.47
USP13-205ENST00000497380 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
USP13-205ENST00000497380 IRX3P78415 501 aaPredicted RBP12.12□□□□□ -0.47
USP13-205ENST00000497380 SREBF2Q12772 1141 aa12.12□□□□□ -0.47
USP13-205ENST00000497380 CCL15Q16663 113 aa12.12□□□□□ -0.47
USP13-205ENST00000497380 KIAA1755Q5JYT7 1200 aa12.12□□□□□ -0.47
USP13-205ENST00000497380 SYDE2Q5VT97 1194 aa12.12□□□□□ -0.47
USP13-205ENST00000497380 CATSPERGQ6ZRH7 1159 aa12.12□□□□□ -0.47
USP13-205ENST00000497380 PAXIP1Q6ZW49 1069 aaPredicted RBP12.12□□□□□ -0.47
USP13-205ENST00000497380 ADGRF4Q8IZF3 695 aa12.12□□□□□ -0.47
USP13-205ENST00000497380 FAM177A1Q8N128 213 aaPredicted RBP12.12□□□□□ -0.47
USP13-205ENST00000497380 RGS22Q8NE09 1264 aa12.12□□□□□ -0.47
USP13-205ENST00000497380 GTF3C2Q8WUA4 911 aaPredicted RBP12.12□□□□□ -0.47
USP13-205ENST00000497380 NUP88Q99567 741 aaPredicted RBP12.12□□□□□ -0.47
USP13-205ENST00000497380 SLF1Q9BQI6 1058 aa12.12□□□□□ -0.47
USP13-205ENST00000497380 SLC26A6Q9BXS9 759 aa12.12□□□□□ -0.47
USP13-205ENST00000497380 VAT1LQ9HCJ6 419 aa12.12□□□□□ -0.47
USP13-205ENST00000497380 ORC3Q9UBD5 711 aaPredicted RBP12.12□□□□□ -0.47
USP13-205ENST00000497380 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
USP13-205ENST00000497380 PNMA6FA0A0J9YX94 578 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 TESPA1A2RU30 521 aaPredicted RBP12.11□□□□□ -0.47
USP13-205ENST00000497380 RASSF10A6NK89 507 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 ZBTB5O15062 677 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 CTDNEP1O95476 244 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 GJB2P29033 226 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 GJA5P36382 358 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 FUT2Q10981 343 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 NOGQ13253 232 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 TRIM29Q14134 588 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 TTBK2Q6IQ55 1244 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 ANKRD23Q86SG2 305 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 NBPF11Q86T75 865 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 CMTR1Q8N1G2 835 aaKnown RBP12.11□□□□□ -0.47
USP13-205ENST00000497380 MB21D1Q8N884 522 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 CCDC12Q8WUD4 166 aaPredicted RBP12.11□□□□□ -0.47
USP13-205ENST00000497380 PHKBQ93100 1093 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 KIFC2Q96AC6 838 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 MS4A4AQ96JQ5 239 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 ZCCHC17Q9NP64 241 aaKnown RBP12.11□□□□□ -0.47
USP13-205ENST00000497380 PPP1R9AQ9ULJ8 1098 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 PRR12Q9ULL5 1215 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 CNTNAP5Q8WYK1 1306 aa12.11□□□□□ -0.47
USP13-205ENST00000497380 CYTH3O43739 400 aa12.1□□□□□ -0.47
USP13-205ENST00000497380 DSG3P32926 999 aa12.1□□□□□ -0.47
USP13-205ENST00000497380 SLC16A2P36021 539 aa12.1□□□□□ -0.47
USP13-205ENST00000497380 ST3GAL1Q11201 340 aa12.1□□□□□ -0.47
USP13-205ENST00000497380 SPRYD3Q8NCJ5 442 aa12.1□□□□□ -0.47
USP13-205ENST00000497380 DDX11Q96FC9 970 aa12.1□□□□□ -0.47
USP13-205ENST00000497380 JMJD4Q9H9V9 463 aa12.1□□□□□ -0.47
USP13-205ENST00000497380 JAK2O60674 1132 aa12.09□□□□□ -0.47
USP13-205ENST00000497380 SCG2P13521 617 aa12.09□□□□□ -0.47
USP13-205ENST00000497380 SLC4A3P48751 1232 aa12.09□□□□□ -0.47
USP13-205ENST00000497380 OAZ1P54368 228 aa12.09□□□□□ -0.47
USP13-205ENST00000497380 MKRN3Q13064 507 aaKnown RBP12.09□□□□□ -0.47
USP13-205ENST00000497380 PFKFB3Q16875 520 aaPredicted RBP12.09□□□□□ -0.47
USP13-205ENST00000497380 TREML2Q5T2D2 321 aa12.09□□□□□ -0.47
USP13-205ENST00000497380 LARP1BQ659C4 914 aaKnown RBP12.09□□□□□ -0.47
USP13-205ENST00000497380 LBX2Q6XYB7 198 aa12.09□□□□□ -0.47
USP13-205ENST00000497380 RASGRP2Q7LDG7 609 aa12.09□□□□□ -0.47
USP13-205ENST00000497380 HOMER1Q86YM7 354 aa12.09□□□□□ -0.47
USP13-205ENST00000497380 TEX2Q8IWB9 1127 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms