RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 OSBP2Q969R2 916 aa20.1■□□□□ 0.81
TRAPPC3-207ENST00000497251 PDLIM7Q9NR12 457 aa20.1■□□□□ 0.81
TRAPPC3-207ENST00000497251 FAM184BQ9ULE4 1060 aa20.1■□□□□ 0.81
TRAPPC3-207ENST00000497251 TTC41PQ6P2S7 1318 aa20.09■□□□□ 0.81
TRAPPC3-207ENST00000497251 DNAJC25-GNG10A0A024R161 153 aa20.09■□□□□ 0.81
TRAPPC3-207ENST00000497251 IGKV6D-41A0A0C4DH26 115 aa20.09■□□□□ 0.81
TRAPPC3-207ENST00000497251 MOXD2PA6NHM9 499 aa20.09■□□□□ 0.81
TRAPPC3-207ENST00000497251 MINDY4BA8MYZ0 360 aa20.09■□□□□ 0.81
TRAPPC3-207ENST00000497251 PATL2C9JE40 543 aaKnown RBP20.09■□□□□ 0.81
TRAPPC3-207ENST00000497251 SMIM22K7EJ46 135 aa20.09■□□□□ 0.81
TRAPPC3-207ENST00000497251 GPAA1O43292 621 aa20.09■□□□□ 0.81
TRAPPC3-207ENST00000497251 NDUFB10O96000 172 aa20.09■□□□□ 0.81
TRAPPC3-207ENST00000497251 ZNF865P0CJ78 1059 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC3-207ENST00000497251 GMCL1P1Q8NEA9 526 aa20.09■□□□□ 0.81
TRAPPC3-207ENST00000497251 CHST13Q8NET6 341 aa20.09■□□□□ 0.81
TRAPPC3-207ENST00000497251 PRDM5Q9NQX1 630 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC3-207ENST00000497251 KIAA0355O15063 1070 aa20.08■□□□□ 0.81
TRAPPC3-207ENST00000497251 SMARCA5O60264 1052 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC3-207ENST00000497251 TTLL1O95922 423 aa20.08■□□□□ 0.81
TRAPPC3-207ENST00000497251 CHGBP05060 677 aa20.08■□□□□ 0.81
TRAPPC3-207ENST00000497251 CLTBP09497 229 aa20.08■□□□□ 0.81
TRAPPC3-207ENST00000497251 TDO2P48775 406 aa20.08■□□□□ 0.81
TRAPPC3-207ENST00000497251 TLE2Q04725 743 aa20.08■□□□□ 0.81
TRAPPC3-207ENST00000497251 PDE4BQ07343 736 aa20.08■□□□□ 0.81
TRAPPC3-207ENST00000497251 SNRNP48Q6IEG0 339 aaKnown RBP20.08■□□□□ 0.81
TRAPPC3-207ENST00000497251 ANKRD33Q7Z3H0 272 aa20.08■□□□□ 0.81
TRAPPC3-207ENST00000497251 FERMT2Q96AC1 680 aa20.08■□□□□ 0.81
TRAPPC3-207ENST00000497251 MTMR4Q9NYA4 1195 aa20.08■□□□□ 0.81
TRAPPC3-207ENST00000497251 CLIP2Q9UDT6 1046 aa20.08■□□□□ 0.81
TRAPPC3-207ENST00000497251 LAMA2P24043 3122 aaKnown RBP20.08■□□□□ 0.8
TRAPPC3-207ENST00000497251 GREB1LQ9C091 1923 aaPredicted RBP20.08■□□□□ 0.8
TRAPPC3-207ENST00000497251 TMEM265A0A087WTH1 108 aa20.07■□□□□ 0.8
TRAPPC3-207ENST00000497251 DUSP11O75319 330 aaKnown RBP20.07■□□□□ 0.8
TRAPPC3-207ENST00000497251 APPP05067 770 aa20.07■□□□□ 0.8
TRAPPC3-207ENST00000497251 SHHQ15465 462 aa20.07■□□□□ 0.8
TRAPPC3-207ENST00000497251 BADQ92934 168 aa20.07■□□□□ 0.8
TRAPPC3-207ENST00000497251 ABHD16BQ9H3Z7 469 aa20.07■□□□□ 0.8
TRAPPC3-207ENST00000497251 SPC25Q9HBM1 224 aa20.07■□□□□ 0.8
TRAPPC3-207ENST00000497251 SLC38A10Q9HBR0 1119 aa20.07■□□□□ 0.8
TRAPPC3-207ENST00000497251 COL11A1P12107 1806 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC3-207ENST00000497251 MROH7Q68CQ1 1323 aa20.06■□□□□ 0.8
TRAPPC3-207ENST00000497251 DCDC2CA8MYV0 355 aa20.06■□□□□ 0.8
TRAPPC3-207ENST00000497251 ADAMTS4O75173 837 aa20.06■□□□□ 0.8
TRAPPC3-207ENST00000497251 PGK1P00558 417 aa20.06■□□□□ 0.8
TRAPPC3-207ENST00000497251 CST5P28325 142 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC3-207ENST00000497251 PCSK9Q8NBP7 692 aaKnown RBP20.06■□□□□ 0.8
TRAPPC3-207ENST00000497251 NEDD1Q8NHV4 660 aa20.06■□□□□ 0.8
TRAPPC3-207ENST00000497251 PLIN4Q96Q06 1357 aa20.06■□□□□ 0.8
TRAPPC3-207ENST00000497251 ELP1O95163 1332 aa20.05■□□□□ 0.8
TRAPPC3-207ENST00000497251 A0A1W2PQ45 241 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC3-207ENST00000497251 A0A1W2PQY0 241 aa20.05■□□□□ 0.8
TRAPPC3-207ENST00000497251 TRIM43BA6NCK2 446 aa20.05■□□□□ 0.8
TRAPPC3-207ENST00000497251 IFNL3Q8IZI9 196 aa20.05■□□□□ 0.8
TRAPPC3-207ENST00000497251 KLHDC9Q8NEP7 349 aa20.05■□□□□ 0.8
TRAPPC3-207ENST00000497251 CHURC1Q8WUH1 139 aa20.05■□□□□ 0.8
TRAPPC3-207ENST00000497251 TRIM43Q96BQ3 446 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC3-207ENST00000497251 PLXNA1Q9UIW2 1896 aa20.05■□□□□ 0.8
TRAPPC3-207ENST00000497251 LTBP2Q14767 1821 aa20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 PLA2G6O60733 806 aa20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 SNAI1O95863 264 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 RAG1P15918 1043 aa20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 TAL1P17542 331 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 ACLYP53396 1101 aa20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 C20orf194Q5TEA3 1177 aa20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 CCDC174Q6PII3 467 aa20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 FAM160B2Q86V87 743 aa20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 TICAM2Q86XR7 235 aa20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 ANKRD35Q8N283 1001 aa20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 CEP95Q96GE4 821 aa20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 GUCD1Q96NT3 240 aa20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 NUP88Q99567 741 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 STARD7Q9NQZ5 370 aa20.04■□□□□ 0.8
TRAPPC3-207ENST00000497251 TSPY3P0CV98 308 aa20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 TSPY8P0CW00 308 aa20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 BMP3P12645 472 aa20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 ACVR2BQ13705 512 aa20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 TKFCQ3LXA3 575 aa20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 SH3RF1Q7Z6J0 888 aa20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 CPXCR1Q8N123 301 aa20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 KIFC2Q96AC6 838 aa20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 GMCL1Q96IK5 515 aa20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 GLT1D1Q96MS3 346 aa20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 SEZ6LQ9BYH1 1024 aa20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 SEMA6BQ9H3T3 888 aa20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 EPB41L4AQ9HCS5 686 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 TMEM39AQ9NV64 488 aa20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 RIPK3Q9Y572 518 aa20.03■□□□□ 0.8
TRAPPC3-207ENST00000497251 STAT2P52630 851 aa20.02■□□□□ 0.8
TRAPPC3-207ENST00000497251 NKX3-2P78367 333 aa20.02■□□□□ 0.8
TRAPPC3-207ENST00000497251 FPGSQ05932 587 aa20.02■□□□□ 0.8
TRAPPC3-207ENST00000497251 C9orf50Q5SZB4 431 aa20.02■□□□□ 0.8
TRAPPC3-207ENST00000497251 CCSAPQ6IQ19 270 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC3-207ENST00000497251 NAPBQ9H115 298 aa20.02■□□□□ 0.8
TRAPPC3-207ENST00000497251 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.02■□□□□ 0.8
TRAPPC3-207ENST00000497251 SYNRGQ9UMZ2 1314 aa20.02■□□□□ 0.79
TRAPPC3-207ENST00000497251 PQBP1O60828 265 aaKnown RBP20.01■□□□□ 0.79
TRAPPC3-207ENST00000497251 GJA9P57773 515 aa20.01■□□□□ 0.79
TRAPPC3-207ENST00000497251 KCNA10Q16322 511 aa20.01■□□□□ 0.79
TRAPPC3-207ENST00000497251 SLFN13Q68D06 897 aa20.01■□□□□ 0.79
TRAPPC3-207ENST00000497251 UPF3AQ9H1J1 476 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms