RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 FBXL21Q9UKT6 434 aa6.09□□□□□ -1.43
SMC4-225ENST00000497203 ZNF214Q9UL59 606 aaPredicted RBP6.09□□□□□ -1.43
SMC4-225ENST00000497203 PCDHB12Q9Y5F1 795 aa6.09□□□□□ -1.43
SMC4-225ENST00000497203 MRVI1Q9Y6F6 885 aa6.09□□□□□ -1.43
SMC4-225ENST00000497203 U2SURPO15042 1029 aaKnown RBP6.08□□□□□ -1.44
SMC4-225ENST00000497203 SIGLEC6O43699 453 aa6.08□□□□□ -1.44
SMC4-225ENST00000497203 TEKQ02763 1124 aa6.08□□□□□ -1.44
SMC4-225ENST00000497203 FYB2Q5VWT5 728 aa6.08□□□□□ -1.44
SMC4-225ENST00000497203 DCAF15Q66K64 600 aa6.08□□□□□ -1.44
SMC4-225ENST00000497203 NOP9Q86U38 636 aaKnown RBP6.08□□□□□ -1.44
SMC4-225ENST00000497203 C7orf61Q8IZ16 206 aa6.08□□□□□ -1.44
SMC4-225ENST00000497203 USHBP1Q8N6Y0 703 aa6.08□□□□□ -1.44
SMC4-225ENST00000497203 ZNF655Q8N720 491 aaPredicted RBP6.08□□□□□ -1.44
SMC4-225ENST00000497203 C19orf47Q8N9M1 422 aaKnown RBP6.08□□□□□ -1.44
SMC4-225ENST00000497203 TRIM55Q9BYV6 548 aa6.08□□□□□ -1.44
SMC4-225ENST00000497203 OSBPL2Q9H1P3 480 aa6.08□□□□□ -1.44
SMC4-225ENST00000497203 TMEM59LQ9UK28 342 aa6.08□□□□□ -1.44
SMC4-225ENST00000497203 PCDHB10Q9UN67 800 aa6.08□□□□□ -1.44
SMC4-225ENST00000497203 MEIS1O00470 390 aa6.07□□□□□ -1.44
SMC4-225ENST00000497203 BIN1O00499 593 aa6.07□□□□□ -1.44
SMC4-225ENST00000497203 GDNFP39905 211 aa6.07□□□□□ -1.44
SMC4-225ENST00000497203 HK2P52789 917 aa6.07□□□□□ -1.44
SMC4-225ENST00000497203 NFE2L2Q16236 605 aa6.07□□□□□ -1.44
SMC4-225ENST00000497203 PPP2R5EQ16537 467 aa6.07□□□□□ -1.44
SMC4-225ENST00000497203 SMARCC1Q92922 1105 aaPredicted RBP6.07□□□□□ -1.44
SMC4-225ENST00000497203 FOXP3Q9BZS1 431 aa6.07□□□□□ -1.44
SMC4-225ENST00000497203 CHST7Q9NS84 486 aa6.07□□□□□ -1.44
SMC4-225ENST00000497203 SIRPGQ9P1W8 387 aa6.07□□□□□ -1.44
SMC4-225ENST00000497203 CARMIL2Q6F5E8 1435 aa6.07□□□□□ -1.44
SMC4-225ENST00000497203 SMAD7O15105 426 aaKnown RBP6.06□□□□□ -1.44
SMC4-225ENST00000497203 KLF4O43474 513 aa6.06□□□□□ -1.44
SMC4-225ENST00000497203 ZGLP1P0C6A0 271 aa6.06□□□□□ -1.44
SMC4-225ENST00000497203 CTSKP43235 329 aa6.06□□□□□ -1.44
SMC4-225ENST00000497203 CASP7P55210 303 aa6.06□□□□□ -1.44
SMC4-225ENST00000497203 ERVFC1P60507 584 aa6.06□□□□□ -1.44
SMC4-225ENST00000497203 RAB33AQ14088 237 aa6.06□□□□□ -1.44
SMC4-225ENST00000497203 CCDC144BQ3MJ40 725 aa6.06□□□□□ -1.44
SMC4-225ENST00000497203 FBLN7Q53RD9 439 aa6.06□□□□□ -1.44
SMC4-225ENST00000497203 ANKRD39Q53RE8 183 aa6.06□□□□□ -1.44
SMC4-225ENST00000497203 MKL1Q969V6 931 aa6.06□□□□□ -1.44
SMC4-225ENST00000497203 ZSWIM4Q9H7M6 989 aa6.06□□□□□ -1.44
SMC4-225ENST00000497203 ACTR10Q9NZ32 417 aa6.06□□□□□ -1.44
SMC4-225ENST00000497203 EBF1Q9UH73 591 aa6.06□□□□□ -1.44
SMC4-225ENST00000497203 SLC12A7Q9Y666 1083 aa6.06□□□□□ -1.44
SMC4-225ENST00000497203 CBFA2T2O43439 604 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 SYPP08247 313 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 ZNF445P59923 1031 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 BBS9Q3SYG4 887 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 GNPTABQ3T906 1256 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 ZPBP2Q6X784 338 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 RNF111Q6ZNA4 994 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 LINC00116Q8NCU8 138 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 HNRNPLLQ8WVV9 542 aaKnown RBP6.05□□□□□ -1.44
SMC4-225ENST00000497203 KLHL6Q8WZ60 621 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 FAM168AQ92567 244 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 CCDC120Q96HB5 630 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 PHAXQ9H814 394 aaKnown RBP6.05□□□□□ -1.44
SMC4-225ENST00000497203 GP6Q9HCN6 339 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 PRR13Q9NZ81 148 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 TCFL5Q9UL49 500 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 ZNF281Q9Y2X9 895 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 ZNF451Q9Y4E5 1061 aa6.05□□□□□ -1.44
SMC4-225ENST00000497203 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.05□□□□□ -1.44
SMC4-225ENST00000497203 TMEM82A0PJX8 343 aa6.04□□□□□ -1.44
SMC4-225ENST00000497203 FKTNO75072 461 aa6.04□□□□□ -1.44
SMC4-225ENST00000497203 CD247P20963 164 aa6.04□□□□□ -1.44
SMC4-225ENST00000497203 RPL10P27635 214 aaKnown RBP6.04□□□□□ -1.44
SMC4-225ENST00000497203 AFMP43652 599 aa6.04□□□□□ -1.44
SMC4-225ENST00000497203 PCBP3P57721 371 aaKnown RBP6.04□□□□□ -1.44
SMC4-225ENST00000497203 SLC7A5Q01650 507 aa6.04□□□□□ -1.44
SMC4-225ENST00000497203 SERINC3Q13530 473 aa6.04□□□□□ -1.44
SMC4-225ENST00000497203 CRTC3Q6UUV7 619 aa6.04□□□□□ -1.44
SMC4-225ENST00000497203 BRF1Q92994 677 aa6.04□□□□□ -1.44
SMC4-225ENST00000497203 MRFAP1L1Q96HT8 127 aa6.04□□□□□ -1.44
SMC4-225ENST00000497203 HAUS7Q99871 368 aa6.04□□□□□ -1.44
SMC4-225ENST00000497203 G6PC3Q9BUM1 346 aa6.04□□□□□ -1.44
SMC4-225ENST00000497203 SSU72P8A0A1W2PR75 194 aa6.03□□□□□ -1.44
SMC4-225ENST00000497203 HPXP02790 462 aa6.03□□□□□ -1.44
SMC4-225ENST00000497203 CANXP27824 592 aaKnown RBP6.03□□□□□ -1.44
SMC4-225ENST00000497203 TRHRP34981 398 aaPredicted RBP6.03□□□□□ -1.44
SMC4-225ENST00000497203 FXNQ16595 210 aa6.03□□□□□ -1.44
SMC4-225ENST00000497203 NOL9Q5SY16 702 aaKnown RBP6.03□□□□□ -1.44
SMC4-225ENST00000497203 SPOCD1Q6ZMY3 1216 aa6.03□□□□□ -1.44
SMC4-225ENST00000497203 LRP10Q7Z4F1 713 aa6.03□□□□□ -1.44
SMC4-225ENST00000497203 WAPLQ7Z5K2 1190 aa6.03□□□□□ -1.44
SMC4-225ENST00000497203 ZSWIM9Q86XI8 627 aa6.03□□□□□ -1.44
SMC4-225ENST00000497203 LINC01599Q8WXQ3 324 aa6.03□□□□□ -1.44
SMC4-225ENST00000497203 KIRREL1Q96J84 757 aa6.03□□□□□ -1.44
SMC4-225ENST00000497203 DSCC1Q9BVC3 393 aa6.03□□□□□ -1.44
SMC4-225ENST00000497203 KLHL25Q9H0H3 589 aa6.03□□□□□ -1.44
SMC4-225ENST00000497203 SP110Q9HB58 689 aa6.03□□□□□ -1.44
SMC4-225ENST00000497203 H0Y8X5 98 aa6.02□□□□□ -1.45
SMC4-225ENST00000497203 EPHX1P07099 455 aa6.02□□□□□ -1.45
SMC4-225ENST00000497203 BMP8BP34820 402 aa6.02□□□□□ -1.45
SMC4-225ENST00000497203 BMS1Q14692 1282 aaKnown RBP6.02□□□□□ -1.45
SMC4-225ENST00000497203 KCNMB1Q16558 191 aa6.02□□□□□ -1.45
SMC4-225ENST00000497203 TIGD5Q53EQ6 642 aa6.02□□□□□ -1.45
SMC4-225ENST00000497203 KIAA1211LQ6NV74 962 aa6.02□□□□□ -1.45
SMC4-225ENST00000497203 VHLLQ6RSH7 139 aa6.02□□□□□ -1.45
SMC4-225ENST00000497203 FIBCD1Q8N539 461 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms