RNA–Protein interactions for RNA: ENST00000496340.1

NEPRO-224, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 4

Gene NEPRO, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-224ENST00000496340 RIOX2Q8IUF8 465 aa12.88□□□□□ -0.35
NEPRO-224ENST00000496340 CCAR1Q8IX12 1150 aaKnown RBP12.88□□□□□ -0.35
NEPRO-224ENST00000496340 PRPF38AQ8NAV1 312 aaKnown RBP12.88□□□□□ -0.35
NEPRO-224ENST00000496340 GMCL1Q96IK5 515 aa12.88□□□□□ -0.35
NEPRO-224ENST00000496340 FGD4Q96M96 766 aa12.88□□□□□ -0.35
NEPRO-224ENST00000496340 SLC38A10Q9HBR0 1119 aa12.88□□□□□ -0.35
NEPRO-224ENST00000496340 TOMM22Q9NS69 142 aa12.88□□□□□ -0.35
NEPRO-224ENST00000496340 TCP11L1Q9NUJ3 509 aa12.88□□□□□ -0.35
NEPRO-224ENST00000496340 RANBP2P49792 3224 aaKnown RBP12.88□□□□□ -0.35
NEPRO-224ENST00000496340 ZNF236Q9UL36 1845 aa12.88□□□□□ -0.35
NEPRO-224ENST00000496340 RPTORQ8N122 1335 aa12.88□□□□□ -0.35
NEPRO-224ENST00000496340 B4E1Z4 1266 aa12.87□□□□□ -0.35
NEPRO-224ENST00000496340 ZNF213O14771 459 aa12.87□□□□□ -0.35
NEPRO-224ENST00000496340 SGSM2O43147 1006 aa12.87□□□□□ -0.35
NEPRO-224ENST00000496340 ZKSCAN1P17029 563 aaPredicted RBP12.87□□□□□ -0.35
NEPRO-224ENST00000496340 SLC16A2P36021 539 aa12.87□□□□□ -0.35
NEPRO-224ENST00000496340 MFSD6Q6ZSS7 791 aa12.87□□□□□ -0.35
NEPRO-224ENST00000496340 STOX1Q6ZVD7 989 aa12.87□□□□□ -0.35
NEPRO-224ENST00000496340 CPXCR1Q8N123 301 aa12.87□□□□□ -0.35
NEPRO-224ENST00000496340 AGBL1Q96MI9 1066 aa12.87□□□□□ -0.35
NEPRO-224ENST00000496340 CPVLQ9H3G5 476 aa12.87□□□□□ -0.35
NEPRO-224ENST00000496340 MROH8Q9H579 483 aa12.87□□□□□ -0.35
NEPRO-224ENST00000496340 ZSWIM5Q9P217 1185 aa12.87□□□□□ -0.35
NEPRO-224ENST00000496340 FEM1BQ9UK73 627 aa12.87□□□□□ -0.35
NEPRO-224ENST00000496340 SYNPO2Q9UMS6 1093 aa12.87□□□□□ -0.35
NEPRO-224ENST00000496340 FRMPD2Q68DX3 1309 aaPredicted RBP12.87□□□□□ -0.35
NEPRO-224ENST00000496340 HIP1O00291 1037 aa12.86□□□□□ -0.35
NEPRO-224ENST00000496340 STRNO43815 780 aa12.86□□□□□ -0.35
NEPRO-224ENST00000496340 KDM4AO75164 1064 aa12.86□□□□□ -0.35
NEPRO-224ENST00000496340 TFRCP02786 760 aaKnown RBP12.86□□□□□ -0.35
NEPRO-224ENST00000496340 CYP21A2P08686 494 aa12.86□□□□□ -0.35
NEPRO-224ENST00000496340 SLC1A4P43007 532 aa12.86□□□□□ -0.35
NEPRO-224ENST00000496340 SLC4A3P48751 1232 aa12.86□□□□□ -0.35
NEPRO-224ENST00000496340 ZNF792Q3KQV3 632 aa12.86□□□□□ -0.35
NEPRO-224ENST00000496340 SNRNP48Q6IEG0 339 aaKnown RBP12.86□□□□□ -0.35
NEPRO-224ENST00000496340 CYB5R4Q7L1T6 521 aa12.86□□□□□ -0.35
NEPRO-224ENST00000496340 MAML3Q96JK9 1138 aa12.86□□□□□ -0.35
NEPRO-224ENST00000496340 SENP2Q9HC62 589 aa12.86□□□□□ -0.35
NEPRO-224ENST00000496340 HMX1Q9NP08 348 aaPredicted RBP12.86□□□□□ -0.35
NEPRO-224ENST00000496340 PRR12Q9ULL5 1215 aa12.86□□□□□ -0.35
NEPRO-224ENST00000496340 DDX49Q9Y6V7 483 aaKnown RBP12.86□□□□□ -0.35
NEPRO-224ENST00000496340 ATP2A1O14983 1001 aa12.85□□□□□ -0.35
NEPRO-224ENST00000496340 PDHBP11177 359 aa12.85□□□□□ -0.35
NEPRO-224ENST00000496340 CYBAP13498 195 aa12.85□□□□□ -0.35
NEPRO-224ENST00000496340 MFAP1P55081 439 aaKnown RBP12.85□□□□□ -0.35
NEPRO-224ENST00000496340 DPP9Q86TI2 863 aa12.85□□□□□ -0.35
NEPRO-224ENST00000496340 ABRAQ8N0Z2 381 aa12.85□□□□□ -0.35
NEPRO-224ENST00000496340 PAWRQ96IZ0 340 aaKnown RBP12.85□□□□□ -0.35
NEPRO-224ENST00000496340 CWC22Q9HCG8 908 aaKnown RBP12.85□□□□□ -0.35
NEPRO-224ENST00000496340 OGDHLQ9ULD0 1010 aa12.85□□□□□ -0.35
NEPRO-224ENST00000496340 IVNS1ABPQ9Y6Y0 642 aa12.85□□□□□ -0.35
NEPRO-224ENST00000496340 ALPK3Q96L96 1907 aa12.85□□□□□ -0.35
NEPRO-224ENST00000496340 ASTN1O14525 1302 aa12.85□□□□□ -0.35
NEPRO-224ENST00000496340 DNAJC25-GNG10A0A024R161 153 aa12.84□□□□□ -0.35
NEPRO-224ENST00000496340 FARP2O94887 1054 aaPredicted RBP12.84□□□□□ -0.35
NEPRO-224ENST00000496340 SLC25A27O95847 323 aa12.84□□□□□ -0.35
NEPRO-224ENST00000496340 GOLGA8HP0CJ92 632 aa12.84□□□□□ -0.35
NEPRO-224ENST00000496340 SNHG28P0DPA3 235 aa12.84□□□□□ -0.35
NEPRO-224ENST00000496340 TOP1P11387 765 aaKnown RBP12.84□□□□□ -0.35
NEPRO-224ENST00000496340 FCER1AP12319 257 aa12.84□□□□□ -0.35
NEPRO-224ENST00000496340 MUM1L1Q5H9M0 696 aa12.84□□□□□ -0.35
NEPRO-224ENST00000496340 ANO1Q5XXA6 986 aa12.84□□□□□ -0.35
NEPRO-224ENST00000496340 OLFML2BQ68BL8 750 aa12.84□□□□□ -0.35
NEPRO-224ENST00000496340 CENPQQ7L2Z9 268 aaPredicted RBP12.84□□□□□ -0.35
NEPRO-224ENST00000496340 ENAHQ8N8S7 591 aaPredicted RBP12.84□□□□□ -0.35
NEPRO-224ENST00000496340 PURBQ96QR8 312 aaKnown RBP12.84□□□□□ -0.35
NEPRO-224ENST00000496340 MMP19Q99542 508 aa12.84□□□□□ -0.35
NEPRO-224ENST00000496340 TEX13BQ9BXU2 312 aa12.84□□□□□ -0.35
NEPRO-224ENST00000496340 LSG1Q9H089 658 aaKnown RBP12.84□□□□□ -0.35
NEPRO-224ENST00000496340 GPCPD1Q9NPB8 672 aa12.84□□□□□ -0.35
NEPRO-224ENST00000496340 PLXNA1Q9UIW2 1896 aa12.84□□□□□ -0.35
NEPRO-224ENST00000496340 FRMPD3Q5JV73 1810 aa12.83□□□□□ -0.35
NEPRO-224ENST00000496340 CEP290O15078 2479 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 PLA2G6O60733 806 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 ZBED4O75132 1171 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 STAT2P52630 851 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 CNTN2Q02246 1040 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 SEC23AQ15436 765 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 SLC35G1Q2M3R5 365 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 CCDC174Q6PII3 467 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 BTNL9Q6UXG8 535 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 ANKS1AQ92625 1134 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 ESR2Q92731 530 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 MAP4K1Q92918 833 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 HOMER2Q9NSB8 354 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 PFASO15067 1338 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 RAD50Q92878 1312 aa12.83□□□□□ -0.36
NEPRO-224ENST00000496340 LCTP09848 1927 aa12.82□□□□□ -0.36
NEPRO-224ENST00000496340 H0YGN5 161 aa12.82□□□□□ -0.36
NEPRO-224ENST00000496340 SNAI1O95863 264 aaPredicted RBP12.82□□□□□ -0.36
NEPRO-224ENST00000496340 PCP11498 1178 aaKnown RBP12.82□□□□□ -0.36
NEPRO-224ENST00000496340 ANTXR2P58335 489 aa12.82□□□□□ -0.36
NEPRO-224ENST00000496340 IRX5P78411 483 aaPredicted RBP12.82□□□□□ -0.36
NEPRO-224ENST00000496340 ZNF543Q08ER8 600 aa12.82□□□□□ -0.36
NEPRO-224ENST00000496340 IMMTQ16891 758 aaKnown RBP12.82□□□□□ -0.36
NEPRO-224ENST00000496340 CCDC96Q2M329 555 aa12.82□□□□□ -0.36
NEPRO-224ENST00000496340 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.82□□□□□ -0.36
NEPRO-224ENST00000496340 CHST3Q7LGC8 479 aa12.82□□□□□ -0.36
NEPRO-224ENST00000496340 TRMT44Q8IYL2 757 aaKnown RBP12.82□□□□□ -0.36
NEPRO-224ENST00000496340 DCAF4Q8WV16 495 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms