RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 CPXCR1Q8N123 301 aa17.1■□□□□ 0.33
PDAP1-204ENST00000496335 GMCL1Q96IK5 515 aa17.1■□□□□ 0.33
PDAP1-204ENST00000496335 ZBED4O75132 1171 aa17.09■□□□□ 0.33
PDAP1-204ENST00000496335 FCER1AP12319 257 aa17.09■□□□□ 0.33
PDAP1-204ENST00000496335 CCND3P30281 292 aaPredicted RBP17.09■□□□□ 0.33
PDAP1-204ENST00000496335 CYP2C19P33261 490 aa17.09■□□□□ 0.33
PDAP1-204ENST00000496335 SNRNP48Q6IEG0 339 aaKnown RBP17.09■□□□□ 0.33
PDAP1-204ENST00000496335 KCTD1Q719H9 257 aa17.09■□□□□ 0.33
PDAP1-204ENST00000496335 UBE2Q1Q7Z7E8 422 aa17.09■□□□□ 0.33
PDAP1-204ENST00000496335 TMEM47Q9BQJ4 181 aa17.09■□□□□ 0.33
PDAP1-204ENST00000496335 CRISPLD2Q9H0B8 497 aa17.09■□□□□ 0.33
PDAP1-204ENST00000496335 RNF41Q9H4P4 317 aaPredicted RBP17.09■□□□□ 0.33
PDAP1-204ENST00000496335 SLC38A10Q9HBR0 1119 aa17.09■□□□□ 0.33
PDAP1-204ENST00000496335 RAVER2Q9HCJ3 691 aaKnown RBP17.09■□□□□ 0.33
PDAP1-204ENST00000496335 TCP11L1Q9NUJ3 509 aa17.09■□□□□ 0.33
PDAP1-204ENST00000496335 RIPK3Q9Y572 518 aa17.09■□□□□ 0.33
PDAP1-204ENST00000496335 PLXNA1Q9UIW2 1896 aa17.08■□□□□ 0.33
PDAP1-204ENST00000496335 FARP2O94887 1054 aaPredicted RBP17.08■□□□□ 0.32
PDAP1-204ENST00000496335 PGK2P07205 417 aa17.08■□□□□ 0.32
PDAP1-204ENST00000496335 PCP11498 1178 aaKnown RBP17.08■□□□□ 0.32
PDAP1-204ENST00000496335 IKQ13123 557 aaPredicted RBP17.08■□□□□ 0.32
PDAP1-204ENST00000496335 IMMTQ16891 758 aaKnown RBP17.08■□□□□ 0.32
PDAP1-204ENST00000496335 MFSD14CQ5VZR4 134 aa17.08■□□□□ 0.32
PDAP1-204ENST00000496335 RCSD1Q6JBY9 416 aa17.08■□□□□ 0.32
PDAP1-204ENST00000496335 CENPQQ7L2Z9 268 aaPredicted RBP17.08■□□□□ 0.32
PDAP1-204ENST00000496335 ABRAQ8N0Z2 381 aa17.08■□□□□ 0.32
PDAP1-204ENST00000496335 MMP19Q99542 508 aa17.08■□□□□ 0.32
PDAP1-204ENST00000496335 ZKSCAN3Q9BRR0 538 aa17.08■□□□□ 0.32
PDAP1-204ENST00000496335 TEX13BQ9BXU2 312 aa17.08■□□□□ 0.32
PDAP1-204ENST00000496335 CTNNA3Q9UI47 895 aa17.08■□□□□ 0.32
PDAP1-204ENST00000496335 CTDP1Q9Y5B0 961 aaPredicted RBP17.08■□□□□ 0.32
PDAP1-204ENST00000496335 RAD50Q92878 1312 aa17.07■□□□□ 0.32
PDAP1-204ENST00000496335 KDM4AO75164 1064 aa17.07■□□□□ 0.32
PDAP1-204ENST00000496335 IGHA2P01877 340 aa17.07■□□□□ 0.32
PDAP1-204ENST00000496335 TOP1P11387 765 aaKnown RBP17.07■□□□□ 0.32
PDAP1-204ENST00000496335 STAT2P52630 851 aa17.07■□□□□ 0.32
PDAP1-204ENST00000496335 PTH1RQ03431 593 aa17.07■□□□□ 0.32
PDAP1-204ENST00000496335 CHURC1Q8WUH1 139 aa17.07■□□□□ 0.32
PDAP1-204ENST00000496335 RUFY2Q8WXA3 655 aa17.07■□□□□ 0.32
PDAP1-204ENST00000496335 ESR2Q92731 530 aa17.07■□□□□ 0.32
PDAP1-204ENST00000496335 SMCHD1A6NHR9 2005 aa17.06■□□□□ 0.32
PDAP1-204ENST00000496335 B4E1Z4 1266 aa17.06■□□□□ 0.32
PDAP1-204ENST00000496335 ATP2A1O14983 1001 aa17.06■□□□□ 0.32
PDAP1-204ENST00000496335 SNAP25P60880 206 aa17.06■□□□□ 0.32
PDAP1-204ENST00000496335 KCTD2Q14681 263 aa17.06■□□□□ 0.32
PDAP1-204ENST00000496335 CCDC96Q2M329 555 aa17.06■□□□□ 0.32
PDAP1-204ENST00000496335 FAM160B2Q86V87 743 aa17.06■□□□□ 0.32
PDAP1-204ENST00000496335 TRPV1Q8NER1 839 aa17.06■□□□□ 0.32
PDAP1-204ENST00000496335 DIS3LQ8TF46 1054 aaKnown RBP17.06■□□□□ 0.32
PDAP1-204ENST00000496335 SGSM2O43147 1006 aa17.05■□□□□ 0.32
PDAP1-204ENST00000496335 CNGA1P29973 690 aa17.05■□□□□ 0.32
PDAP1-204ENST00000496335 COPB2P35606 906 aa17.05■□□□□ 0.32
PDAP1-204ENST00000496335 PRPF38BQ5VTL8 546 aaKnown RBP17.05■□□□□ 0.32
PDAP1-204ENST00000496335 OLFML2BQ68BL8 750 aa17.05■□□□□ 0.32
PDAP1-204ENST00000496335 LHX8Q68G74 356 aa17.05■□□□□ 0.32
PDAP1-204ENST00000496335 TTBK2Q6IQ55 1244 aa17.05■□□□□ 0.32
PDAP1-204ENST00000496335 DCAF4Q8WV16 495 aa17.05■□□□□ 0.32
PDAP1-204ENST00000496335 PAWRQ96IZ0 340 aaKnown RBP17.05■□□□□ 0.32
PDAP1-204ENST00000496335 MAML3Q96JK9 1138 aa17.05■□□□□ 0.32
PDAP1-204ENST00000496335 TTC14Q96N46 770 aa17.05■□□□□ 0.32
PDAP1-204ENST00000496335 SLC5A4Q9NY91 659 aa17.05■□□□□ 0.32
PDAP1-204ENST00000496335 FRMPD2Q68DX3 1309 aaPredicted RBP17.04■□□□□ 0.32
PDAP1-204ENST00000496335 PLA2G6O60733 806 aa17.04■□□□□ 0.32
PDAP1-204ENST00000496335 SLC16A2P36021 539 aa17.04■□□□□ 0.32
PDAP1-204ENST00000496335 MNX1P50219 401 aaPredicted RBP17.04■□□□□ 0.32
PDAP1-204ENST00000496335 ZNF792Q3KQV3 632 aa17.04■□□□□ 0.32
PDAP1-204ENST00000496335 PRAMEF19Q5SWL8 479 aa17.04■□□□□ 0.32
PDAP1-204ENST00000496335 AGBL1Q96MI9 1066 aa17.04■□□□□ 0.32
PDAP1-204ENST00000496335 GPCPD1Q9NPB8 672 aa17.04■□□□□ 0.32
PDAP1-204ENST00000496335 HOMER2Q9NSB8 354 aa17.04■□□□□ 0.32
PDAP1-204ENST00000496335 ZSWIM5Q9P217 1185 aa17.04■□□□□ 0.32
PDAP1-204ENST00000496335 OGDHLQ9ULD0 1010 aa17.04■□□□□ 0.32
PDAP1-204ENST00000496335 PRR12Q9ULL5 1215 aa17.04■□□□□ 0.32
PDAP1-204ENST00000496335 FRMPD3Q5JV73 1810 aa17.03■□□□□ 0.32
PDAP1-204ENST00000496335 ZNF536O15090 1300 aa17.03■□□□□ 0.32
PDAP1-204ENST00000496335 FDX1P10109 184 aa17.03■□□□□ 0.32
PDAP1-204ENST00000496335 CYBAP13498 195 aa17.03■□□□□ 0.32
PDAP1-204ENST00000496335 CAPN2P17655 700 aa17.03■□□□□ 0.32
PDAP1-204ENST00000496335 OAZ1P54368 228 aa17.03■□□□□ 0.32
PDAP1-204ENST00000496335 CCDC174Q6PII3 467 aa17.03■□□□□ 0.32
PDAP1-204ENST00000496335 DGKHQ86XP1 1220 aa17.03■□□□□ 0.32
PDAP1-204ENST00000496335 DPF3Q92784 378 aa17.03■□□□□ 0.32
PDAP1-204ENST00000496335 DDX11Q96FC9 970 aa17.03■□□□□ 0.32
PDAP1-204ENST00000496335 CYP21A2P08686 494 aa17.02■□□□□ 0.32
PDAP1-204ENST00000496335 PDHBP11177 359 aa17.02■□□□□ 0.32
PDAP1-204ENST00000496335 IQCA1Q86XH1 822 aa17.02■□□□□ 0.32
PDAP1-204ENST00000496335 ANKLE1Q8NAG6 615 aa17.02■□□□□ 0.32
PDAP1-204ENST00000496335 ZSCAN10Q96SZ4 725 aaPredicted RBP17.02■□□□□ 0.32
PDAP1-204ENST00000496335 KRT23Q9C075 422 aa17.02■□□□□ 0.32
PDAP1-204ENST00000496335 CNNM2Q9H8M5 875 aa17.02■□□□□ 0.32
PDAP1-204ENST00000496335 TAF6LQ9Y6J9 622 aa17.02■□□□□ 0.32
PDAP1-204ENST00000496335 MCM3APO60318 1980 aa17.02■□□□□ 0.31
PDAP1-204ENST00000496335 ALPK3Q96L96 1907 aa17.02■□□□□ 0.31
PDAP1-204ENST00000496335 TAL1P17542 331 aaPredicted RBP17.01■□□□□ 0.31
PDAP1-204ENST00000496335 BTNL9Q6UXG8 535 aa17.01■□□□□ 0.31
PDAP1-204ENST00000496335 NECAB2Q7Z6G3 386 aa17.01■□□□□ 0.31
PDAP1-204ENST00000496335 ANKRD35Q8N283 1001 aa17.01■□□□□ 0.31
PDAP1-204ENST00000496335 ENAHQ8N8S7 591 aaPredicted RBP17.01■□□□□ 0.31
PDAP1-204ENST00000496335 CHST13Q8NET6 341 aa17.01■□□□□ 0.31
PDAP1-204ENST00000496335 CCDC136Q96JN2 1154 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms