RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	ELN	P15502	786 aa		11.52	□□□□□ -0.57
CALD1-223	ENST00000496024	ERCC3	P19447	782 aa		11.52	□□□□□ -0.57
CALD1-223	ENST00000496024	CYP2B6	P20813	491 aa		11.52	□□□□□ -0.57
CALD1-223	ENST00000496024	ANTXR2	P58335	489 aa		11.52	□□□□□ -0.57
CALD1-223	ENST00000496024	COL9A3	Q14050	684 aa	Predicted RBP	11.52	□□□□□ -0.57
CALD1-223	ENST00000496024	SART3	Q15020	963 aa	Known RBP	11.52	□□□□□ -0.57
CALD1-223	ENST00000496024	TMEM67	Q5HYA8	995 aa		11.52	□□□□□ -0.57
CALD1-223	ENST00000496024	FAM160B2	Q86V87	743 aa		11.52	□□□□□ -0.57
CALD1-223	ENST00000496024	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.52	□□□□□ -0.57
CALD1-223	ENST00000496024	LRRC2	Q9BYS8	371 aa		11.52	□□□□□ -0.57
CALD1-223	ENST00000496024	RAVER2	Q9HCJ3	691 aa	Known RBP	11.52	□□□□□ -0.57
CALD1-223	ENST00000496024	GJD2	Q9UKL4	321 aa		11.52	□□□□□ -0.57
CALD1-223	ENST00000496024	ADAMTS5	Q9UNA0	930 aa		11.52	□□□□□ -0.57
CALD1-223	ENST00000496024	IVNS1ABP	Q9Y6Y0	642 aa		11.52	□□□□□ -0.57
CALD1-223	ENST00000496024		A0A0G2JMZ2	1700 aa		11.52	□□□□□ -0.57
CALD1-223	ENST00000496024	PLXNB2	O15031	1838 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	CENPF	P49454	3210 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	PRC1	O43663	620 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	GRK4	P32298	578 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	STAT3	P40763	770 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	WTAP	Q15007	396 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	SEC23A	Q15436	765 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	SNRNP48	Q6IEG0	339 aa	Known RBP	11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	CCDC174	Q6PII3	467 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	RASEF	Q8IZ41	740 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	REPS2	Q8NFH8	660 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	ANKS1A	Q92625	1134 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	NUDT12	Q9BQG2	462 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	CPVL	Q9H3G5	476 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	SLC38A10	Q9HBR0	1119 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	SENP2	Q9HC62	589 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	GPHN	Q9NQX3	736 aa	Predicted RBP	11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	ZNF214	Q9UL59	606 aa	Predicted RBP	11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	PRR12	Q9ULL5	1215 aa		11.51	□□□□□ -0.57
CALD1-223	ENST00000496024	SMCHD1	A6NHR9	2005 aa		11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	ZKSCAN1	P17029	563 aa	Predicted RBP	11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	PTPRE	P23469	700 aa		11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	MCM5	P33992	734 aa		11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	SOX10	P56693	466 aa		11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	ZNF543	Q08ER8	600 aa		11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	ADCK5	Q3MIX3	580 aa		11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	SYDE2	Q5VT97	1194 aa		11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	NBPF11	Q86T75	865 aa		11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	TCEANC2	Q96MN5	208 aa		11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	TEX13B	Q9BXU2	312 aa		11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	UBA5	Q9GZZ9	404 aa		11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	MROH8	Q9H579	483 aa		11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	HOMER2	Q9NSB8	354 aa		11.5	□□□□□ -0.57
CALD1-223	ENST00000496024	SLC15A5	A6NIM6	579 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	DHX16	O60231	1041 aa	Known RBP	11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	SLC25A27	O95847	323 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	PARP1	P09874	1014 aa	Known RBP	11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	SNHG28	P0DPA3	235 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	CPA1	P15085	419 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	TAL1	P17542	331 aa	Predicted RBP	11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	RGS2	P41220	211 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	MAP2K5	Q13163	448 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	IRF5	Q13568	498 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	MORN1	Q5T089	497 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	GPATCH4	Q5T3I0	446 aa	Known RBP	11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	NFXL1	Q6ZNB6	911 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	DPP9	Q86TI2	863 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	RIOX2	Q8IUF8	465 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	SLAIN1	Q8ND83	568 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	SHCBP1	Q8NEM2	672 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	IGDCC4	Q8TDY8	1250 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	SOCS4	Q8WXH5	440 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	AGBL1	Q96MI9	1066 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	NEK1	Q96PY6	1258 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	MMP19	Q99542	508 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	VAT1L	Q9HCJ6	419 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	RIPK3	Q9Y572	518 aa		11.49	□□□□□ -0.57
CALD1-223	ENST00000496024	PLA2G6	O60733	806 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	FCER1A	P12319	257 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	ALAS1	P13196	640 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	ADORA2A	P29274	412 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	HSPA4	P34932	840 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	TRIM32	Q13049	653 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	GRB14	Q14449	540 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	KRT32	Q14532	448 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	MTFR1	Q15390	333 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	CCL14	Q16627	93 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	ASPRV1	Q53RT3	343 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	IFFO2	Q5TF58	517 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	BTNL9	Q6UXG8	535 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	CATIP	Q7Z7H3	387 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	RAB11FIP4	Q86YS3	637 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	STAG2	Q8N3U4	1231 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	NUP133	Q8WUM0	1156 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	USP6NL	Q92738	828 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	ARMC5	Q96C12	935 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	ZNF333	Q96JL9	665 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	JAKMIP1	Q96N16	626 aa	Known RBP	11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	MYL10	Q9BUA6	226 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	LY9	Q9HBG7	655 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	SNX14	Q9Y5W7	946 aa		11.48	□□□□□ -0.57
CALD1-223	ENST00000496024	MYH6	P13533	1939 aa		11.47	□□□□□ -0.57
CALD1-223	ENST00000496024	ZNF536	O15090	1300 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms