RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 MAML3Q96JK9 1138 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 MMP19Q99542 508 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 TEX13BQ9BXU2 312 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 SLC38A10Q9HBR0 1119 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 FEM1BQ9UK73 627 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 DIS3Q9Y2L1 958 aaKnown RBP8.56□□□□□ -1.04
VPS52-221ENST00000495755 RIPK3Q9Y572 518 aa8.56□□□□□ -1.04
VPS52-221ENST00000495755 SZT2Q5T011 3432 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 PFASO15067 1338 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 ZMYM6O95789 1325 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 TSPY2A6NKD2 308 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 RANBP6O60518 1105 aaKnown RBP8.55□□□□□ -1.04
VPS52-221ENST00000495755 NMT2O60551 498 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 MSCO60682 206 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 PLA2G6O60733 806 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 PGK2P07205 417 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 MCCP23508 829 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 CNGA1P29973 690 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 KCTD2Q14681 263 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 PPP4R3BQ5MIZ7 849 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 SNRNP48Q6IEG0 339 aaKnown RBP8.55□□□□□ -1.04
VPS52-221ENST00000495755 CHRDL2Q6WN34 429 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.55□□□□□ -1.04
VPS52-221ENST00000495755 STAG1Q8WVM7 1258 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 KIFC2Q96AC6 838 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 NRBP1Q9UHY1 535 aa8.55□□□□□ -1.04
VPS52-221ENST00000495755 CCDC171Q6TFL3 1326 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 COL11A1P12107 1806 aaPredicted RBP8.54□□□□□ -1.04
VPS52-221ENST00000495755 DNAJC25-GNG10A0A024R161 153 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 TMEM232C9JQI7 657 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 SEPT4O43236 478 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 FDX1P10109 184 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 PDE4AP27815 886 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 FXR1P51114 621 aaKnown RBP eCLIP8.54□□□□□ -1.04
VPS52-221ENST00000495755 OAZ1P54368 228 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 MFAP1P55081 439 aaKnown RBP8.54□□□□□ -1.04
VPS52-221ENST00000495755 PRAMEF19Q5SWL8 479 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 RCSD1Q6JBY9 416 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 C7orf61Q8IZ16 206 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 CPXCR1Q8N123 301 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 CHURC1Q8WUH1 139 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 TINF2Q9BSI4 451 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 RAVER2Q9HCJ3 691 aaKnown RBP8.54□□□□□ -1.04
VPS52-221ENST00000495755 TCP11L1Q9NUJ3 509 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 RBM27Q9P2N5 1060 aaKnown RBP8.54□□□□□ -1.04
VPS52-221ENST00000495755 STX8Q9UNK0 236 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 LAMA3Q16787 3333 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 MYH4Q9Y623 1939 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 TRIOBPQ9H2D6 2365 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 ZNF536O15090 1300 aa8.54□□□□□ -1.04
VPS52-221ENST00000495755 ALPK3Q96L96 1907 aa8.53□□□□□ -1.04
VPS52-221ENST00000495755 HIP1O00291 1037 aa8.53□□□□□ -1.04
VPS52-221ENST00000495755 DNM1LO00429 736 aa8.53□□□□□ -1.04
VPS52-221ENST00000495755 PCP11498 1178 aaKnown RBP8.53□□□□□ -1.04
VPS52-221ENST00000495755 TAL1P17542 331 aaPredicted RBP8.53□□□□□ -1.04
VPS52-221ENST00000495755 SLC1A4P43007 532 aa8.53□□□□□ -1.04
VPS52-221ENST00000495755 HAND2P61296 217 aa8.53□□□□□ -1.04
VPS52-221ENST00000495755 LRRC26Q2I0M4 334 aa8.53□□□□□ -1.04
VPS52-221ENST00000495755 AKNAD1Q5T1N1 836 aa8.53□□□□□ -1.04
VPS52-221ENST00000495755 CWC27Q6UX04 472 aaKnown RBP8.53□□□□□ -1.04
VPS52-221ENST00000495755 MAMDC4Q6UXC1 1216 aa8.53□□□□□ -1.04
VPS52-221ENST00000495755 FAM160B2Q86V87 743 aa8.53□□□□□ -1.04
VPS52-221ENST00000495755 MSL3Q8N5Y2 521 aaKnown RBP8.53□□□□□ -1.04
VPS52-221ENST00000495755 ARRDC4Q8NCT1 418 aa8.53□□□□□ -1.04
VPS52-221ENST00000495755 CHST13Q8NET6 341 aa8.53□□□□□ -1.04
VPS52-221ENST00000495755 ZNFX1Q9P2E3 1918 aaKnown RBP8.52□□□□□ -1.04
VPS52-221ENST00000495755 SNAI1O95863 264 aaPredicted RBP8.52□□□□□ -1.05
VPS52-221ENST00000495755 ZNF865P0CJ78 1059 aaPredicted RBP8.52□□□□□ -1.05
VPS52-221ENST00000495755 TOP1P11387 765 aaKnown RBP8.52□□□□□ -1.05
VPS52-221ENST00000495755 SLC4A3P48751 1232 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 STAT2P52630 851 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 IRX6P78412 446 aaPredicted RBP8.52□□□□□ -1.05
VPS52-221ENST00000495755 RRP12Q5JTH9 1297 aaKnown RBP8.52□□□□□ -1.05
VPS52-221ENST00000495755 GJC2Q5T442 439 aaPredicted RBP8.52□□□□□ -1.05
VPS52-221ENST00000495755 ANO1Q5XXA6 986 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 BTNL9Q6UXG8 535 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 MFSD6Q6ZSS7 791 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 KCTD1Q719H9 257 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 RASGRP2Q7LDG7 609 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 ZNF467Q7Z7K2 595 aaPredicted RBP8.52□□□□□ -1.05
VPS52-221ENST00000495755 TBC1D10CQ8IV04 446 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 DCAF4Q8WV16 495 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 CHMP4CQ96CF2 233 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 DDX11Q96FC9 970 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 FGD4Q96M96 766 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 AGBL1Q96MI9 1066 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 GDF15Q99988 308 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 TMEM47Q9BQJ4 181 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 SENP6Q9GZR1 1112 aaPredicted RBP8.52□□□□□ -1.05
VPS52-221ENST00000495755 TOMM22Q9NS69 142 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 DIAPH3Q9NSV4 1193 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 FBXO40Q9UH90 709 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 PRR12Q9ULL5 1215 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 ZMYND8Q9ULU4 1186 aaPredicted RBP8.52□□□□□ -1.05
VPS52-221ENST00000495755 CTDP1Q9Y5B0 961 aaPredicted RBP8.52□□□□□ -1.05
VPS52-221ENST00000495755 SYNGAP1Q96PV0 1343 aa8.52□□□□□ -1.05
VPS52-221ENST00000495755 A0A1W2PPC1 479 aa8.51□□□□□ -1.05
VPS52-221ENST00000495755 ZNF213O14771 459 aa8.51□□□□□ -1.05
VPS52-221ENST00000495755 GSPT1P15170 499 aaKnown RBP8.51□□□□□ -1.05
VPS52-221ENST00000495755 BMP8BP34820 402 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms