RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 NRBP1Q9UHY1 535 aa14.43□□□□□ -0.1
SHROOM1-206ENST00000495680 DIS3Q9Y2L1 958 aaKnown RBP14.43□□□□□ -0.1
SHROOM1-206ENST00000495680 CDH23Q9H251 3354 aa14.43□□□□□ -0.1
SHROOM1-206ENST00000495680 MCM3APO60318 1980 aa14.42□□□□□ -0.1
SHROOM1-206ENST00000495680 DNAJC25-GNG10A0A024R161 153 aa14.42□□□□□ -0.1
SHROOM1-206ENST00000495680 A0A1W2PQ45 241 aaPredicted RBP14.42□□□□□ -0.1
SHROOM1-206ENST00000495680 A0A1W2PQY0 241 aa14.42□□□□□ -0.1
SHROOM1-206ENST00000495680 MYADML2A6NDP7 307 aa14.42□□□□□ -0.1
SHROOM1-206ENST00000495680 GPAA1O43292 621 aa14.42□□□□□ -0.1
SHROOM1-206ENST00000495680 PQBP1O60828 265 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-206ENST00000495680 CPXCR1Q8N123 301 aa14.42□□□□□ -0.1
SHROOM1-206ENST00000495680 FGD4Q96M96 766 aa14.42□□□□□ -0.1
SHROOM1-206ENST00000495680 TEX13BQ9BXU2 312 aa14.42□□□□□ -0.1
SHROOM1-206ENST00000495680 CHMP4BQ9H444 224 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-206ENST00000495680 DCTPP1Q9H773 170 aa14.42□□□□□ -0.1
SHROOM1-206ENST00000495680 MKNK2Q9HBH9 465 aa14.42□□□□□ -0.1
SHROOM1-206ENST00000495680 NYAP2Q9P242 653 aa14.42□□□□□ -0.1
SHROOM1-206ENST00000495680 SYNRGQ9UMZ2 1314 aa14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 EYSQ5T1H1 3165 aa14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 RNF113AO15541 343 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 ADCY6O43306 1168 aa14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 AKR1A1P14550 325 aa14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 ZNF697Q5TEC3 545 aa14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 RNF180Q86T96 592 aa14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 LRRC47Q8N1G4 583 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 KIFC2Q96AC6 838 aa14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 CEP95Q96GE4 821 aa14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 SEC62Q99442 399 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 CDX2Q99626 313 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 TTYH1Q9H313 450 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 RAVER2Q9HCJ3 691 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 CLIP2Q9UDT6 1046 aa14.41□□□□□ -0.1
SHROOM1-206ENST00000495680 CLTBP09497 229 aa14.4□□□□□ -0.1
SHROOM1-206ENST00000495680 COPB2P35606 906 aa14.4□□□□□ -0.1
SHROOM1-206ENST00000495680 GIMAP6Q6P9H5 292 aa14.4□□□□□ -0.1
SHROOM1-206ENST00000495680 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.4□□□□□ -0.1
SHROOM1-206ENST00000495680 OTUD7AQ8TE49 926 aaPredicted RBP14.4□□□□□ -0.1
SHROOM1-206ENST00000495680 COL25A1Q9BXS0 654 aaPredicted RBP14.4□□□□□ -0.1
SHROOM1-206ENST00000495680 SEMA6BQ9H3T3 888 aa14.4□□□□□ -0.1
SHROOM1-206ENST00000495680 ZHX1Q9UKY1 873 aaPredicted RBP14.4□□□□□ -0.1
SHROOM1-206ENST00000495680 CNPY2Q9Y2B0 182 aa14.4□□□□□ -0.1
SHROOM1-206ENST00000495680 KIAA0355O15063 1070 aa14.39□□□□□ -0.11
SHROOM1-206ENST00000495680 TDO2P48775 406 aa14.39□□□□□ -0.11
SHROOM1-206ENST00000495680 ACLYP53396 1101 aa14.39□□□□□ -0.11
SHROOM1-206ENST00000495680 CCSAPQ6IQ19 270 aaPredicted RBP14.39□□□□□ -0.11
SHROOM1-206ENST00000495680 MAMDC4Q6UXC1 1216 aa14.39□□□□□ -0.11
SHROOM1-206ENST00000495680 IFNL3Q8IZI9 196 aa14.39□□□□□ -0.11
SHROOM1-206ENST00000495680 PRPF38AQ8NAV1 312 aaKnown RBP14.39□□□□□ -0.11
SHROOM1-206ENST00000495680 KLHDC9Q8NEP7 349 aa14.39□□□□□ -0.11
SHROOM1-206ENST00000495680 CHMP4CQ96CF2 233 aa14.39□□□□□ -0.11
SHROOM1-206ENST00000495680 DDX11Q96FC9 970 aa14.39□□□□□ -0.11
SHROOM1-206ENST00000495680 SLC38A10Q9HBR0 1119 aa14.39□□□□□ -0.11
SHROOM1-206ENST00000495680 MTMR4Q9NYA4 1195 aa14.39□□□□□ -0.11
SHROOM1-206ENST00000495680 TACC3Q9Y6A5 838 aa14.39□□□□□ -0.11
SHROOM1-206ENST00000495680 SYNGAP1Q96PV0 1343 aa14.39□□□□□ -0.11
SHROOM1-206ENST00000495680 ATP2A1O14983 1001 aa14.38□□□□□ -0.11
SHROOM1-206ENST00000495680 APPP05067 770 aa14.38□□□□□ -0.11
SHROOM1-206ENST00000495680 FAAP100Q0VG06 881 aa14.38□□□□□ -0.11
SHROOM1-206ENST00000495680 MYLIPQ8WY64 445 aa14.38□□□□□ -0.11
SHROOM1-206ENST00000495680 MKL1Q969V6 931 aa14.38□□□□□ -0.11
SHROOM1-206ENST00000495680 STARD7Q9NQZ5 370 aa14.38□□□□□ -0.11
SHROOM1-206ENST00000495680 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-206ENST00000495680 DDX49Q9Y6V7 483 aaKnown RBP14.38□□□□□ -0.11
SHROOM1-206ENST00000495680 VCANP13611 3396 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 FOXP2O15409 715 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 ZBED4O75132 1171 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 RAG1P15918 1043 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 PTGS1P23219 599 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 SMAD3P84022 425 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 ACVR2BQ13705 512 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 KCNA10Q16322 511 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 SLFN13Q68D06 897 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 RASGRP2Q7LDG7 609 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 ANKRD33Q7Z3H0 272 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 ZNF444Q8N0Y2 327 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 MSL3Q8N5Y2 521 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 PI4K2BQ8TCG2 481 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 RNPC3Q96LT9 517 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 TSEN34Q9BSV6 310 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 KATNBL1Q9H079 304 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 INCENPQ9NQS7 918 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 TMEM39AQ9NV64 488 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 FAM184BQ9ULE4 1060 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 PCDHB15Q9Y5E8 787 aa14.37□□□□□ -0.11
SHROOM1-206ENST00000495680 PLIN4Q96Q06 1357 aa14.36□□□□□ -0.11
SHROOM1-206ENST00000495680 PATL2C9JE40 543 aaKnown RBP14.36□□□□□ -0.11
SHROOM1-206ENST00000495680 TTLL1O95922 423 aa14.36□□□□□ -0.11
SHROOM1-206ENST00000495680 ZFYP08048 801 aaPredicted RBP14.36□□□□□ -0.11
SHROOM1-206ENST00000495680 CNTN2Q02246 1040 aa14.36□□□□□ -0.11
SHROOM1-206ENST00000495680 CCDC144BQ3MJ40 725 aa14.36□□□□□ -0.11
SHROOM1-206ENST00000495680 ZNF467Q7Z7K2 595 aaPredicted RBP14.36□□□□□ -0.11
SHROOM1-206ENST00000495680 GMCL1P1Q8NEA9 526 aa14.36□□□□□ -0.11
SHROOM1-206ENST00000495680 NEDD1Q8NHV4 660 aa14.36□□□□□ -0.11
SHROOM1-206ENST00000495680 GPATCH3Q96I76 525 aa14.36□□□□□ -0.11
SHROOM1-206ENST00000495680 HOMER2Q9NSB8 354 aa14.36□□□□□ -0.11
SHROOM1-206ENST00000495680 FEM1BQ9UK73 627 aa14.36□□□□□ -0.11
SHROOM1-206ENST00000495680 PRUNE2Q8WUY3 3088 aa14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 CTAGE5O15320 804 aa14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 DUSP11O75319 330 aaKnown RBP14.35□□□□□ -0.11
SHROOM1-206ENST00000495680 C6orf222P0C671 652 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms