RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.24■□□□□ 0.19
COL1A1-209ENST00000495677 ERC1Q8IUD2 1116 aa16.24■□□□□ 0.19
COL1A1-209ENST00000495677 ADAMTS19Q8TE59 1207 aa16.24■□□□□ 0.19
COL1A1-209ENST00000495677 PRDM12Q9H4Q4 367 aa16.24■□□□□ 0.19
COL1A1-209ENST00000495677 KANSL2Q9H9L4 492 aa16.24■□□□□ 0.19
COL1A1-209ENST00000495677 BDP1A6H8Y1 2624 aa16.24■□□□□ 0.19
COL1A1-209ENST00000495677 ZNF532Q9HCE3 1301 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 REV3LO60673 3130 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 GRXCR1A8MXD5 290 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 CSF2RAP15509 400 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 GJA9P57773 515 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 ADGRE1Q14246 886 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 RAB30Q15771 203 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 C12orf60Q5U649 245 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 ZKSCAN2Q63HK3 967 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 ZNF365Q70YC5 407 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 HERVK_113Q902F9 699 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 DYNLL2Q96FJ2 89 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 UHRF1Q96T88 793 aaPredicted RBP16.23■□□□□ 0.19
COL1A1-209ENST00000495677 UPF3AQ9H1J1 476 aaKnown RBP16.23■□□□□ 0.19
COL1A1-209ENST00000495677 FBXO28Q9NVF7 368 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 MSRAQ9UJ68 235 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 ARIH1Q9Y4X5 557 aaPredicted RBP16.23■□□□□ 0.19
COL1A1-209ENST00000495677 CHD7Q9P2D1 2997 aa16.23■□□□□ 0.19
COL1A1-209ENST00000495677 ATP2A1O14983 1001 aa16.22■□□□□ 0.19
COL1A1-209ENST00000495677 CD4P01730 458 aa16.22■□□□□ 0.19
COL1A1-209ENST00000495677 ASGR1P07306 291 aa16.22■□□□□ 0.19
COL1A1-209ENST00000495677 CYP2D6P10635 497 aa16.22■□□□□ 0.19
COL1A1-209ENST00000495677 EEF2P13639 858 aaKnown RBP16.22■□□□□ 0.19
COL1A1-209ENST00000495677 CDK8P49336 464 aa16.22■□□□□ 0.19
COL1A1-209ENST00000495677 C16orf86Q6ZW13 317 aa16.22■□□□□ 0.19
COL1A1-209ENST00000495677 AACSQ86V21 672 aa16.22■□□□□ 0.19
COL1A1-209ENST00000495677 CLEC10AQ8IUN9 316 aa16.22■□□□□ 0.19
COL1A1-209ENST00000495677 FAM126BQ8IXS8 530 aa16.22■□□□□ 0.19
COL1A1-209ENST00000495677 LCORLQ8N3X6 602 aa16.22■□□□□ 0.19
COL1A1-209ENST00000495677 PPM1EQ8WY54 764 aa16.22■□□□□ 0.19
COL1A1-209ENST00000495677 LENG1Q96BZ8 264 aaPredicted RBP16.22■□□□□ 0.19
COL1A1-209ENST00000495677 ABHD16BQ9H3Z7 469 aa16.22■□□□□ 0.19
COL1A1-209ENST00000495677 GOPCQ9HD26 462 aa16.22■□□□□ 0.19
COL1A1-209ENST00000495677 A0A0U1RQG5 324 aaPredicted RBP16.21■□□□□ 0.19
COL1A1-209ENST00000495677 TLR3O15455 904 aaKnown RBP16.21■□□□□ 0.19
COL1A1-209ENST00000495677 ACVR2BQ13705 512 aa16.21■□□□□ 0.19
COL1A1-209ENST00000495677 FAM122AQ96E09 287 aa16.21■□□□□ 0.19
COL1A1-209ENST00000495677 DDX11Q96FC9 970 aa16.21■□□□□ 0.19
COL1A1-209ENST00000495677 TEX13BQ9BXU2 312 aa16.21■□□□□ 0.19
COL1A1-209ENST00000495677 SPC25Q9HBM1 224 aa16.21■□□□□ 0.19
COL1A1-209ENST00000495677 IL23AQ9NPF7 189 aa16.21■□□□□ 0.19
COL1A1-209ENST00000495677 RAPGEFL1Q9UHV5 662 aa16.21■□□□□ 0.19
COL1A1-209ENST00000495677 MYADML2A6NDP7 307 aa16.2■□□□□ 0.18
COL1A1-209ENST00000495677 C6orf222P0C671 652 aaPredicted RBP16.2■□□□□ 0.18
COL1A1-209ENST00000495677 BMP1P13497 986 aa16.2■□□□□ 0.18
COL1A1-209ENST00000495677 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
COL1A1-209ENST00000495677 SLC43A3Q8NBI5 491 aa16.2■□□□□ 0.18
COL1A1-209ENST00000495677 C1QTNF1Q9BXJ1 281 aa16.2■□□□□ 0.18
COL1A1-209ENST00000495677 SEZ6LQ9BYH1 1024 aa16.2■□□□□ 0.18
COL1A1-209ENST00000495677 TSPYL2Q9H2G4 693 aaPredicted RBP16.2■□□□□ 0.18
COL1A1-209ENST00000495677 MTIF3Q9H2K0 278 aaKnown RBP16.2■□□□□ 0.18
COL1A1-209ENST00000495677 C1orf115Q9H7X2 142 aa16.2■□□□□ 0.18
COL1A1-209ENST00000495677 CXXC1Q9P0U4 656 aaPredicted RBP16.2■□□□□ 0.18
COL1A1-209ENST00000495677 FGBP02675 491 aa16.19■□□□□ 0.18
COL1A1-209ENST00000495677 ACRP10323 421 aa16.19■□□□□ 0.18
COL1A1-209ENST00000495677 HOXD11P31277 338 aaPredicted RBP16.19■□□□□ 0.18
COL1A1-209ENST00000495677 HSP90AB4PQ58FF6 505 aa16.19■□□□□ 0.18
COL1A1-209ENST00000495677 GNASQ5JWF2 1037 aa16.19■□□□□ 0.18
COL1A1-209ENST00000495677 FAM83BQ5T0W9 1011 aa16.19■□□□□ 0.18
COL1A1-209ENST00000495677 PRPF38AQ8NAV1 312 aaKnown RBP16.19■□□□□ 0.18
COL1A1-209ENST00000495677 SLC28A3Q9HAS3 691 aa16.19■□□□□ 0.18
COL1A1-209ENST00000495677 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.19■□□□□ 0.18
COL1A1-209ENST00000495677 PRRC2BQ5JSZ5 2229 aaKnown RBP16.19■□□□□ 0.18
COL1A1-209ENST00000495677 TRANK1O15050 2925 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 USP17L12C9JPN9 530 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 USP17L21D6R901 530 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 CTAGE5O15320 804 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 ADCY6O43306 1168 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 POU3F3P20264 500 aaPredicted RBP16.18■□□□□ 0.18
COL1A1-209ENST00000495677 IGFBP4P22692 258 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 ADD2P35612 726 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 CCDC144BQ3MJ40 725 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 CEP85Q6P2H3 762 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 AMOTL1Q8IY63 956 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 IL27Q8NEV9 243 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 VTI1AQ96AJ9 217 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 SLF1Q9BQI6 1058 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 ARMT1Q9H993 441 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 ZHX1Q9UKY1 873 aaPredicted RBP16.18■□□□□ 0.18
COL1A1-209ENST00000495677 RIPK3Q9Y572 518 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 ZBED9Q6R2W3 1325 aa16.18■□□□□ 0.18
COL1A1-209ENST00000495677 PRKAB2O43741 272 aa16.17■□□□□ 0.18
COL1A1-209ENST00000495677 CABYRO75952 493 aa16.17■□□□□ 0.18
COL1A1-209ENST00000495677 IRX5P78411 483 aaPredicted RBP16.17■□□□□ 0.18
COL1A1-209ENST00000495677 CCDC85BQ15834 202 aaPredicted RBP16.17■□□□□ 0.18
COL1A1-209ENST00000495677 AAK1Q2M2I8 961 aa16.17■□□□□ 0.18
COL1A1-209ENST00000495677 SNRNP48Q6IEG0 339 aaKnown RBP16.17■□□□□ 0.18
COL1A1-209ENST00000495677 RHPN1Q8TCX5 695 aa16.17■□□□□ 0.18
COL1A1-209ENST00000495677 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.17■□□□□ 0.18
COL1A1-209ENST00000495677 PPP1R12CQ9BZL4 782 aa16.17■□□□□ 0.18
COL1A1-209ENST00000495677 NYAP2Q9P242 653 aa16.17■□□□□ 0.18
COL1A1-209ENST00000495677 EXOC6BQ9Y2D4 811 aa16.17■□□□□ 0.18
COL1A1-209ENST00000495677 XIRP2A4UGR9 3374 aa16.17■□□□□ 0.18
COL1A1-209ENST00000495677 SMIM22K7EJ46 135 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms