RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 DDX41Q9UJV9 622 aaKnown RBP9.08□□□□□ -0.96
VIM-207ENST00000495528 RAXQ9Y2V3 346 aa9.08□□□□□ -0.96
VIM-207ENST00000495528 COL5A2P05997 1499 aaPredicted RBP9.08□□□□□ -0.96
VIM-207ENST00000495528 CENPJQ9HC77 1338 aaPredicted RBP9.07□□□□□ -0.96
VIM-207ENST00000495528 CRB1P82279 1406 aa9.07□□□□□ -0.96
VIM-207ENST00000495528 LOC100996750A0A140TA64 210 aa9.07□□□□□ -0.96
VIM-207ENST00000495528 FAM95CA0A1B0GW59 222 aa9.07□□□□□ -0.96
VIM-207ENST00000495528 NEFMP07197 916 aa9.07□□□□□ -0.96
VIM-207ENST00000495528 RPL6Q02878 288 aaKnown RBP9.07□□□□□ -0.96
VIM-207ENST00000495528 DDB1Q16531 1140 aa9.07□□□□□ -0.96
VIM-207ENST00000495528 TOM1L2Q6ZVM7 507 aa9.07□□□□□ -0.96
VIM-207ENST00000495528 NPM2Q86SE8 214 aaKnown RBP9.07□□□□□ -0.96
VIM-207ENST00000495528 GATAD2BQ8WXI9 593 aa9.07□□□□□ -0.96
VIM-207ENST00000495528 KRTAP4-6Q9BYQ5 205 aa9.07□□□□□ -0.96
VIM-207ENST00000495528 GSX1Q9H4S2 264 aaPredicted RBP9.07□□□□□ -0.96
VIM-207ENST00000495528 SUPT16HQ9Y5B9 1047 aaKnown RBP9.07□□□□□ -0.96
VIM-207ENST00000495528 SNCAIPQ9Y6H5 919 aa9.07□□□□□ -0.96
VIM-207ENST00000495528 ITSN1Q15811 1721 aa9.07□□□□□ -0.96
VIM-207ENST00000495528 LMO7Q8WWI1 1683 aa9.07□□□□□ -0.96
VIM-207ENST00000495528 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.06□□□□□ -0.96
VIM-207ENST00000495528 FAM221AA4D161 298 aa9.06□□□□□ -0.96
VIM-207ENST00000495528 NKAPLQ5M9Q1 402 aa9.06□□□□□ -0.96
VIM-207ENST00000495528 CCDC84Q86UT8 332 aaPredicted RBP9.06□□□□□ -0.96
VIM-207ENST00000495528 KIAA0825Q8IV33 1275 aa9.06□□□□□ -0.96
VIM-207ENST00000495528 SMYD4Q8IYR2 804 aaPredicted RBP9.06□□□□□ -0.96
VIM-207ENST00000495528 MARCH10Q8NA82 808 aaPredicted RBP9.06□□□□□ -0.96
VIM-207ENST00000495528 RNF214Q8ND24 703 aa9.06□□□□□ -0.96
VIM-207ENST00000495528 ISL2Q96A47 359 aa9.06□□□□□ -0.96
VIM-207ENST00000495528 PDGFDQ9GZP0 370 aaPredicted RBP9.06□□□□□ -0.96
VIM-207ENST00000495528 SEMA6CQ9H3T2 930 aa9.06□□□□□ -0.96
VIM-207ENST00000495528 ACSS3Q9H6R3 686 aa9.06□□□□□ -0.96
VIM-207ENST00000495528 C7orf69Q9H7B7 122 aa9.06□□□□□ -0.96
VIM-207ENST00000495528 UBP1Q9NZI7 540 aa9.06□□□□□ -0.96
VIM-207ENST00000495528 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.06□□□□□ -0.96
VIM-207ENST00000495528 AATKQ6ZMQ8 1374 aa9.06□□□□□ -0.96
VIM-207ENST00000495528 OVOS2A0A0G2JMS6 1433 aa9.05□□□□□ -0.96
VIM-207ENST00000495528 OVOS2A0A0J9YW53 1432 aa9.05□□□□□ -0.96
VIM-207ENST00000495528 OVOS2Q6IE36 1432 aa9.05□□□□□ -0.96
VIM-207ENST00000495528 TOPAZ1Q8N9V7 1692 aa9.05□□□□□ -0.96
VIM-207ENST00000495528 BRD4O60885 1362 aaPredicted RBP9.05□□□□□ -0.96
VIM-207ENST00000495528 CILPO75339 1184 aa9.05□□□□□ -0.96
VIM-207ENST00000495528 ERCC5P28715 1186 aaPredicted RBP9.05□□□□□ -0.96
VIM-207ENST00000495528 CYFIP1Q7L576 1253 aa9.05□□□□□ -0.96
VIM-207ENST00000495528 CLEC10AQ8IUN9 316 aa9.05□□□□□ -0.96
VIM-207ENST00000495528 ZNF654Q8IZM8 581 aa9.05□□□□□ -0.96
VIM-207ENST00000495528 FAM83CQ9BQN1 747 aa9.05□□□□□ -0.96
VIM-207ENST00000495528 NUP188Q5SRE5 1749 aa9.05□□□□□ -0.96
VIM-207ENST00000495528 USP6P35125 1406 aa9.05□□□□□ -0.96
VIM-207ENST00000495528 RREB1Q92766 1687 aa9.04□□□□□ -0.96
VIM-207ENST00000495528 GFRA2O00451 464 aa9.04□□□□□ -0.96
VIM-207ENST00000495528 DYNC1LI2O43237 492 aaPredicted RBP9.04□□□□□ -0.96
VIM-207ENST00000495528 GRIN3BO60391 1043 aa9.04□□□□□ -0.96
VIM-207ENST00000495528 ETF1P62495 437 aaKnown RBP9.04□□□□□ -0.96
VIM-207ENST00000495528 ZBTB37Q5TC79 503 aa9.04□□□□□ -0.96
VIM-207ENST00000495528 PAOXQ6QHF9 649 aa9.04□□□□□ -0.96
VIM-207ENST00000495528 UBE3DQ7Z6J8 389 aa9.04□□□□□ -0.96
VIM-207ENST00000495528 ARHGEF25Q86VW2 580 aa9.04□□□□□ -0.96
VIM-207ENST00000495528 SEMA6BQ9H3T3 888 aa9.04□□□□□ -0.96
VIM-207ENST00000495528 WDR17Q8IZU2 1322 aa9.04□□□□□ -0.96
VIM-207ENST00000495528 FANCGO15287 622 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 DYRK3O43781 588 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 GREM1O60565 184 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 ZBTB7AO95365 584 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 H2AFB1P0C5Y9 115 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 H2AFB2P0C5Z0 115 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 GRK4P32298 578 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 CRKP46108 304 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 RING1Q06587 406 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 RAD51AP2Q09MP3 1159 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 MAP7Q14244 749 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 CDC37L1Q7L3B6 337 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.03□□□□□ -0.96
VIM-207ENST00000495528 EZH1Q92800 747 aaPredicted RBP9.03□□□□□ -0.96
VIM-207ENST00000495528 EAF1Q96JC9 268 aaPredicted RBP9.03□□□□□ -0.96
VIM-207ENST00000495528 ACBD3Q9H3P7 528 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 CCSER2Q9H7U1 834 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 CORINQ9Y5Q5 1042 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 TTC21BQ7Z4L5 1316 aa9.03□□□□□ -0.96
VIM-207ENST00000495528 NINLQ9Y2I6 1382 aa9.02□□□□□ -0.97
VIM-207ENST00000495528 SLIT3O75094 1523 aa9.02□□□□□ -0.97
VIM-207ENST00000495528 EXOC5O00471 708 aa9.02□□□□□ -0.97
VIM-207ENST00000495528 NTF4P34130 210 aa9.02□□□□□ -0.97
VIM-207ENST00000495528 APOBRQ0VD83 1088 aa9.02□□□□□ -0.97
VIM-207ENST00000495528 MPP2Q14168 576 aa9.02□□□□□ -0.97
VIM-207ENST00000495528 TXNRD1Q16881 649 aa9.02□□□□□ -0.97
VIM-207ENST00000495528 SEZ6Q53EL9 994 aa9.02□□□□□ -0.97
VIM-207ENST00000495528 KCNH5Q8NCM2 988 aa9.02□□□□□ -0.97
VIM-207ENST00000495528 WNT10AQ9GZT5 417 aa9.02□□□□□ -0.97
VIM-207ENST00000495528 KCNQ5Q9NR82 932 aa9.02□□□□□ -0.97
VIM-207ENST00000495528 PCOLCE2Q9UKZ9 415 aa9.02□□□□□ -0.97
VIM-207ENST00000495528 PARP4Q9UKK3 1724 aaKnown RBP9.02□□□□□ -0.97
VIM-207ENST00000495528 EVC2Q86UK5 1308 aa9.02□□□□□ -0.97
VIM-207ENST00000495528 MCM4P33991 863 aa9.01□□□□□ -0.97
VIM-207ENST00000495528 PAK2Q13177 524 aa9.01□□□□□ -0.97
VIM-207ENST00000495528 CWF19L2Q2TBE0 894 aaKnown RBP9.01□□□□□ -0.97
VIM-207ENST00000495528 REC114Q7Z4M0 266 aa9.01□□□□□ -0.97
VIM-207ENST00000495528 FBXL6Q8N531 539 aa9.01□□□□□ -0.97
VIM-207ENST00000495528 ZNF507Q8TCN5 953 aa9.01□□□□□ -0.97
VIM-207ENST00000495528 MFSD14AQ96MC6 490 aa9.01□□□□□ -0.97
VIM-207ENST00000495528 TGIF2Q9GZN2 237 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms