RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 SLC15A2Q16348 729 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 KLHL10Q6JEL2 608 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 CDAN1Q8IWY9 1227 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 TCP11L1Q9NUJ3 509 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 MTMR4Q9NYA4 1195 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 BIN2Q9UBW5 565 aaPredicted RBP11.86□□□□□ -0.51
SAMM50-206ENST00000494795 EDIL3O43854 480 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 PPP1R11O60927 126 aaPredicted RBP11.86□□□□□ -0.51
SAMM50-206ENST00000494795 KARSQ15046 597 aaKnown RBP11.86□□□□□ -0.51
SAMM50-206ENST00000494795 PAGE5Q96GU1 130 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 OSBPL5Q9H0X9 879 aaPredicted RBP11.86□□□□□ -0.51
SAMM50-206ENST00000494795 SAMSN1Q9NSI8 373 aaKnown RBP11.86□□□□□ -0.51
SAMM50-206ENST00000494795 FAM13BQ9NYF5 915 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 FAM198AQ9UFP1 575 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 PCDHA4Q9UN74 947 aa11.86□□□□□ -0.51
SAMM50-206ENST00000494795 SARSP49591 514 aaKnown RBP11.85□□□□□ -0.51
SAMM50-206ENST00000494795 PDE4CQ08493 712 aa11.85□□□□□ -0.51
SAMM50-206ENST00000494795 RRP1BQ14684 758 aaKnown RBP11.85□□□□□ -0.51
SAMM50-206ENST00000494795 JAKMIP3Q5VZ66 844 aa11.85□□□□□ -0.51
SAMM50-206ENST00000494795 LRRC8AQ8IWT6 810 aa11.85□□□□□ -0.51
SAMM50-206ENST00000494795 RGS22Q8NE09 1264 aa11.85□□□□□ -0.51
SAMM50-206ENST00000494795 CAMKK2Q96RR4 588 aa11.85□□□□□ -0.51
SAMM50-206ENST00000494795 TDRD3Q9H7E2 651 aaKnown RBP11.85□□□□□ -0.51
SAMM50-206ENST00000494795 BARHL2Q9NY43 387 aa11.85□□□□□ -0.51
SAMM50-206ENST00000494795 MAPK8IP1Q9UQF2 711 aa11.85□□□□□ -0.51
SAMM50-206ENST00000494795 H0YIN7 160 aa11.85□□□□□ -0.51
SAMM50-206ENST00000494795 PARP1P09874 1014 aaKnown RBP11.85□□□□□ -0.51
SAMM50-206ENST00000494795 DACT2Q5SW24 774 aa11.85□□□□□ -0.51
SAMM50-206ENST00000494795 ARMCX5Q6P1M9 558 aa11.85□□□□□ -0.51
SAMM50-206ENST00000494795 TMC6Q7Z403 805 aa11.85□□□□□ -0.51
SAMM50-206ENST00000494795 GDF11O95390 407 aa11.84□□□□□ -0.51
SAMM50-206ENST00000494795 FANCCQ00597 558 aa11.84□□□□□ -0.51
SAMM50-206ENST00000494795 CUL4BQ13620 913 aa11.84□□□□□ -0.51
SAMM50-206ENST00000494795 C7orf43Q8WVR3 580 aa11.84□□□□□ -0.51
SAMM50-206ENST00000494795 C16orf45Q96MC5 204 aaPredicted RBP11.84□□□□□ -0.51
SAMM50-206ENST00000494795 TRMT1Q9NXH9 659 aaKnown RBP11.84□□□□□ -0.51
SAMM50-206ENST00000494795 SERPINB13Q9UIV8 391 aa11.84□□□□□ -0.51
SAMM50-206ENST00000494795 ZBTB12Q9Y330 459 aaPredicted RBP11.84□□□□□ -0.51
SAMM50-206ENST00000494795 NAPAP54920 295 aa11.84□□□□□ -0.51
SAMM50-206ENST00000494795 TEKT1Q969V4 418 aa11.84□□□□□ -0.51
SAMM50-206ENST00000494795 MRFAP1L1Q96HT8 127 aa11.84□□□□□ -0.51
SAMM50-206ENST00000494795 SMCO2A6NFE2 343 aa11.84□□□□□ -0.51
SAMM50-206ENST00000494795 CCZ1BP86790 482 aa11.84□□□□□ -0.51
SAMM50-206ENST00000494795 CCZ1P86791 482 aaPredicted RBP11.84□□□□□ -0.51
SAMM50-206ENST00000494795 E2F4Q16254 413 aa11.84□□□□□ -0.51
SAMM50-206ENST00000494795 LETM2Q2VYF4 491 aa11.84□□□□□ -0.51
SAMM50-206ENST00000494795 ZNF579Q8NAF0 562 aaKnown RBP11.84□□□□□ -0.51
SAMM50-206ENST00000494795 EEF2KMTQ96G04 330 aa11.84□□□□□ -0.51
SAMM50-206ENST00000494795 PRMT6Q96LA8 375 aaPredicted RBP11.84□□□□□ -0.51
SAMM50-206ENST00000494795 NUP88Q99567 741 aaPredicted RBP11.84□□□□□ -0.51
SAMM50-206ENST00000494795 NAT10Q9H0A0 1025 aaKnown RBP11.84□□□□□ -0.51
SAMM50-206ENST00000494795 BRMS1Q9HCU9 246 aa11.84□□□□□ -0.51
SAMM50-206ENST00000494795 PLCG2P16885 1265 aa11.83□□□□□ -0.52
SAMM50-206ENST00000494795 RBM10P98175 930 aaKnown RBP11.83□□□□□ -0.52
SAMM50-206ENST00000494795 MORC3Q14149 939 aa11.83□□□□□ -0.52
SAMM50-206ENST00000494795 UBE2SQ16763 222 aa11.83□□□□□ -0.52
SAMM50-206ENST00000494795 COL4A5P29400 1685 aa11.83□□□□□ -0.52
SAMM50-206ENST00000494795 RAD17O75943 681 aa11.83□□□□□ -0.52
SAMM50-206ENST00000494795 TOP1P11387 765 aaKnown RBP11.83□□□□□ -0.52
SAMM50-206ENST00000494795 SAMD1Q6SPF0 538 aaPredicted RBP11.83□□□□□ -0.52
SAMM50-206ENST00000494795 SIAH1Q8IUQ4 282 aa11.83□□□□□ -0.52
SAMM50-206ENST00000494795 ZSCAN29Q8IWY8 852 aaPredicted RBP11.83□□□□□ -0.52
SAMM50-206ENST00000494795 SMARCE1Q969G3 411 aa11.83□□□□□ -0.52
SAMM50-206ENST00000494795 TNS1Q9HBL0 1735 aaKnown RBP11.83□□□□□ -0.52
SAMM50-206ENST00000494795 SPTLC3Q9NUV7 552 aa11.83□□□□□ -0.52
SAMM50-206ENST00000494795 IGKV6D-41A0A0C4DH26 115 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 SHTN1A0MZ66 631 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 CAVIN2O95810 425 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 NAALADL2Q58DX5 795 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.82□□□□□ -0.52
SAMM50-206ENST00000494795 CEP131Q9UPN4 1083 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 FOCADQ5VW36 1801 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 CCDC194A0A1B0GVG4 234 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 CLRN2A0PK11 232 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 USP17L10C9JJH3 530 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 MYL5Q02045 173 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 SH3RF1Q7Z6J0 888 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 BPIFA3Q9BQP9 254 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 ZNF277Q9NRM2 450 aaPredicted RBP11.82□□□□□ -0.52
SAMM50-206ENST00000494795 NFE2L3Q9Y4A8 694 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 CCNT1O60563 726 aaKnown RBP11.82□□□□□ -0.52
SAMM50-206ENST00000494795 SLFN14P0C7P3 912 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 SKILP12757 684 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 NOVP48745 357 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 NT5DC1Q5TFE4 455 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 PDXDC2PQ6P474 469 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.82□□□□□ -0.52
SAMM50-206ENST00000494795 SPATA20Q8TB22 786 aa11.82□□□□□ -0.52
SAMM50-206ENST00000494795 SIPA1L1O43166 1804 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 UQCRHLA0A096LP55 91 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 GOLGA6L6A8MZA4 724 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 UQCRHP07919 91 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 SLF2Q8IX21 1173 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 ADGRF4Q8IZF3 695 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 ZMYND12Q9H0C1 365 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 JMJD4Q9H9V9 463 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 GDAQ9Y2T3 454 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 SERPINC1P01008 464 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 CDC25BP30305 580 aa11.81□□□□□ -0.52
SAMM50-206ENST00000494795 UBASH3AP57075 661 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms