RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 TMEM39AQ9NV64 488 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 ADAMTS5Q9UNA0 930 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 RIPK3Q9Y572 518 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 TACC3Q9Y6A5 838 aa14.07□□□□□ -0.16
CSNK1E-212ENST00000494610 USP17L12C9JPN9 530 aa14.06□□□□□ -0.16
CSNK1E-212ENST00000494610 USP17L21D6R901 530 aa14.06□□□□□ -0.16
CSNK1E-212ENST00000494610 VWA5AO00534 786 aa14.06□□□□□ -0.16
CSNK1E-212ENST00000494610 KIAA0355O15063 1070 aa14.06□□□□□ -0.16
CSNK1E-212ENST00000494610 PTGS1P23219 599 aa14.06□□□□□ -0.16
CSNK1E-212ENST00000494610 DNAJB2P25686 324 aa14.06□□□□□ -0.16
CSNK1E-212ENST00000494610 STAT3P40763 770 aa14.06□□□□□ -0.16
CSNK1E-212ENST00000494610 MB21D1Q8N884 522 aa14.06□□□□□ -0.16
CSNK1E-212ENST00000494610 GPATCH3Q96I76 525 aa14.06□□□□□ -0.16
CSNK1E-212ENST00000494610 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.06□□□□□ -0.162e-16■□□□□ 11.3
CSNK1E-212ENST00000494610 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.06□□□□□ -0.16
CSNK1E-212ENST00000494610 ARHGEF10LQ9HCE6 1279 aa14.06□□□□□ -0.16
CSNK1E-212ENST00000494610 SLC5A4Q9NY91 659 aa14.06□□□□□ -0.16
CSNK1E-212ENST00000494610 ZNF214Q9UL59 606 aaPredicted RBP14.06□□□□□ -0.16
CSNK1E-212ENST00000494610 SYNRGQ9UMZ2 1314 aa14.06□□□□□ -0.16
CSNK1E-212ENST00000494610 MCM3APO60318 1980 aa14.05□□□□□ -0.16
CSNK1E-212ENST00000494610 WDR46O15213 610 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-212ENST00000494610 SNAI1O95863 264 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-212ENST00000494610 ADD2P35612 726 aa14.05□□□□□ -0.16
CSNK1E-212ENST00000494610 ACLYP53396 1101 aa14.05□□□□□ -0.16
CSNK1E-212ENST00000494610 FPGSQ05932 587 aa14.05□□□□□ -0.16
CSNK1E-212ENST00000494610 TTF1Q15361 905 aaPredicted RBP14.05□□□□□ -0.16
CSNK1E-212ENST00000494610 C12orf60Q5U649 245 aa14.05□□□□□ -0.16
CSNK1E-212ENST00000494610 RNF180Q86T96 592 aa14.05□□□□□ -0.16
CSNK1E-212ENST00000494610 RIOX2Q8IUF8 465 aa14.05□□□□□ -0.16
CSNK1E-212ENST00000494610 LNPKQ9C0E8 428 aa14.05□□□□□ -0.16
CSNK1E-212ENST00000494610 SWAP70Q9UH65 585 aa14.05□□□□□ -0.16
CSNK1E-212ENST00000494610 DDX49Q9Y6V7 483 aaKnown RBP14.05□□□□□ -0.16
CSNK1E-212ENST00000494610 ACRP10323 421 aa14.04□□□□□ -0.16
CSNK1E-212ENST00000494610 KCTD2Q14681 263 aa14.04□□□□□ -0.16
CSNK1E-212ENST00000494610 KCNA10Q16322 511 aa14.04□□□□□ -0.16
CSNK1E-212ENST00000494610 CCSAPQ6IQ19 270 aaPredicted RBP14.04□□□□□ -0.16
CSNK1E-212ENST00000494610 CHMP4CQ96CF2 233 aa14.04□□□□□ -0.16
CSNK1E-212ENST00000494610 STARD7Q9NQZ5 370 aa14.04□□□□□ -0.16
CSNK1E-212ENST00000494610 ZHX1Q9UKY1 873 aaPredicted RBP14.04□□□□□ -0.16
CSNK1E-212ENST00000494610 PPP1R9AQ9ULJ8 1098 aa14.04□□□□□ -0.16
CSNK1E-212ENST00000494610 TRANK1O15050 2925 aa14.04□□□□□ -0.16
CSNK1E-212ENST00000494610 RBAK-RBAKDNI3L0D1 243 aa14.03□□□□□ -0.16
CSNK1E-212ENST00000494610 SLC25A27O95847 323 aa14.03□□□□□ -0.16
CSNK1E-212ENST00000494610 AKR1A1P14550 325 aa14.03□□□□□ -0.16
CSNK1E-212ENST00000494610 CTR9Q6PD62 1173 aa14.03□□□□□ -0.16
CSNK1E-212ENST00000494610 C16orf86Q6ZW13 317 aa14.03□□□□□ -0.16
CSNK1E-212ENST00000494610 PUS7LQ9H0K6 701 aaKnown RBP14.03□□□□□ -0.16
CSNK1E-212ENST00000494610 PRDM12Q9H4Q4 367 aa14.03□□□□□ -0.16
CSNK1E-212ENST00000494610 ZNF576Q9H609 170 aa14.03□□□□□ -0.16
CSNK1E-212ENST00000494610 PAG1Q9NWQ8 432 aa14.03□□□□□ -0.16
CSNK1E-212ENST00000494610 SLC4A4Q9Y6R1 1079 aa14.03□□□□□ -0.16
CSNK1E-212ENST00000494610 IFIT2P09913 472 aaKnown RBP14.02□□□□□ -0.17
CSNK1E-212ENST00000494610 CSF2RAP15509 400 aa14.02□□□□□ -0.17
CSNK1E-212ENST00000494610 CCDC85BQ15834 202 aaPredicted RBP14.02□□□□□ -0.17
CSNK1E-212ENST00000494610 SNRNP48Q6IEG0 339 aaKnown RBP14.02□□□□□ -0.17
CSNK1E-212ENST00000494610 ANKRD33Q7Z3H0 272 aa14.02□□□□□ -0.17
CSNK1E-212ENST00000494610 CPXCR1Q8N123 301 aa14.02□□□□□ -0.17
CSNK1E-212ENST00000494610 KLHDC9Q8NEP7 349 aa14.02□□□□□ -0.17
CSNK1E-212ENST00000494610 TIFAQ96CG3 184 aa14.02□□□□□ -0.17
CSNK1E-212ENST00000494610 FGD4Q96M96 766 aa14.02□□□□□ -0.17
CSNK1E-212ENST00000494610 PBX4Q9BYU1 374 aa14.02□□□□□ -0.17
CSNK1E-212ENST00000494610 PPP1R12CQ9BZL4 782 aa14.02□□□□□ -0.17
CSNK1E-212ENST00000494610 TBX21Q9UL17 535 aa14.02□□□□□ -0.17
CSNK1E-212ENST00000494610 TTC41PQ6P2S7 1318 aa14.01□□□□□ -0.17
CSNK1E-212ENST00000494610 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.01□□□□□ -0.17
CSNK1E-212ENST00000494610 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.01□□□□□ -0.17
CSNK1E-212ENST00000494610 TIMP1P01033 207 aa14.01□□□□□ -0.17
CSNK1E-212ENST00000494610 ADGRE1Q14246 886 aa14.01□□□□□ -0.17
CSNK1E-212ENST00000494610 TMEM240Q5SV17 173 aa14.01□□□□□ -0.17
CSNK1E-212ENST00000494610 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.01□□□□□ -0.17
CSNK1E-212ENST00000494610 SH2D4AQ9H788 454 aa14.01□□□□□ -0.17
CSNK1E-212ENST00000494610 RAVER2Q9HCJ3 691 aaKnown RBP14.01□□□□□ -0.17
CSNK1E-212ENST00000494610 ATP8A2Q9NTI2 1148 aa14.01□□□□□ -0.17
CSNK1E-212ENST00000494610 CNPY2Q9Y2B0 182 aa14.01□□□□□ -0.17
CSNK1E-212ENST00000494610 GREB1LQ9C091 1923 aaPredicted RBP14□□□□□ -0.17
CSNK1E-212ENST00000494610 GBF1Q92538 1859 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 UMODL1Q5DID0 1318 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 DCDC2CA8MYV0 355 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 ERC2O15083 957 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 SMARCA5O60264 1052 aaPredicted RBP14□□□□□ -0.17
CSNK1E-212ENST00000494610 ASGR1P07306 291 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 C6orf222P0C671 652 aaPredicted RBP14□□□□□ -0.17
CSNK1E-212ENST00000494610 MX1P20591 662 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 BEX3Q00994 111 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 TMEM63BQ5T3F8 832 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 TMED8Q6PL24 325 aaPredicted RBP14□□□□□ -0.17
CSNK1E-212ENST00000494610 DDX11Q96FC9 970 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 CCDC17Q96LX7 622 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 KANSL2Q9H9L4 492 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 GOPCQ9HD26 462 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 CXXC1Q9P0U4 656 aaPredicted RBP14□□□□□ -0.17
CSNK1E-212ENST00000494610 NRBP1Q9UHY1 535 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 FAM184BQ9ULE4 1060 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 DIS3Q9Y2L1 958 aaKnown RBP14□□□□□ -0.17
CSNK1E-212ENST00000494610 MYH7P12883 1935 aa14□□□□□ -0.17
CSNK1E-212ENST00000494610 ROBO3Q96MS0 1386 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 DNAJC25-GNG10A0A024R161 153 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 F5H6K3 240 aa13.99□□□□□ -0.17
CSNK1E-212ENST00000494610 CTAGE5O15320 804 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms