RNA–Protein interactions for RNA: ENST00000494538.6

CBWD6-208, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best)

Gene CBWD6, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-208ENST00000494538 KIFC2Q96AC6 838 aa14.99□□□□□ -0.01
CBWD6-208ENST00000494538 C12orf42Q96LP6 360 aa14.99□□□□□ -0.01
CBWD6-208ENST00000494538 ALG1Q9BT22 464 aa14.99□□□□□ -0.01
CBWD6-208ENST00000494538 FEM1BQ9UK73 627 aa14.99□□□□□ -0.01
CBWD6-208ENST00000494538 KCNH4Q9UQ05 1017 aa14.99□□□□□ -0.01
CBWD6-208ENST00000494538 A0A0G2JLL6 359 aaPredicted RBP14.99□□□□□ -0.01
CBWD6-208ENST00000494538 FLOT1O75955 427 aa14.99□□□□□ -0.01
CBWD6-208ENST00000494538 SNAPC2Q13487 334 aa14.99□□□□□ -0.01
CBWD6-208ENST00000494538 SYDE2Q5VT97 1194 aa14.99□□□□□ -0.01
CBWD6-208ENST00000494538 PRRT2Q7Z6L0 340 aaPredicted RBP14.99□□□□□ -0.01
CBWD6-208ENST00000494538 AIFM3Q96NN9 605 aa14.99□□□□□ -0.01
CBWD6-208ENST00000494538 PIGSQ96S52 555 aa14.99□□□□□ -0.01
CBWD6-208ENST00000494538 RIOX1Q9H6W3 641 aa14.99□□□□□ -0.01
CBWD6-208ENST00000494538 JMJD4Q9H9V9 463 aa14.99□□□□□ -0.01
CBWD6-208ENST00000494538 FBXO28Q9NVF7 368 aa14.99□□□□□ -0.01
CBWD6-208ENST00000494538 RBM27Q9P2N5 1060 aaKnown RBP14.99□□□□□ -0.01
CBWD6-208ENST00000494538 PDCP20941 246 aa14.98□□□□□ -0.01
CBWD6-208ENST00000494538 FAM160B2Q86V87 743 aa14.98□□□□□ -0.01
CBWD6-208ENST00000494538 BAZ2BQ9UIF8 2168 aaKnown RBP14.98□□□□□ -0.01
CBWD6-208ENST00000494538 VPS37CA5D8V6 355 aaPredicted RBP14.97□□□□□ -0.01
CBWD6-208ENST00000494538 H3BQV1 296 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 SCG2P13521 617 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 SYT1P21579 422 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 SNAP25P60880 206 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 TRIM29Q14134 588 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 TREML2Q5T2D2 321 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 IFFO2Q5TF58 517 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 SPRYD7Q5W111 196 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 RGMBQ6NW40 437 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 BTNL9Q6UXG8 535 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 PROCA1Q8NCQ7 364 aaPredicted RBP14.97□□□□□ -0.01
CBWD6-208ENST00000494538 C8orf76Q96K31 380 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 SLF1Q9BQI6 1058 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 PRR12Q9ULL5 1215 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 TLL2Q9Y6L7 1015 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 MYH6P13533 1939 aa14.97□□□□□ -0.01
CBWD6-208ENST00000494538 ZBTB48P10074 688 aaPredicted RBP14.96□□□□□ -0.01
CBWD6-208ENST00000494538 PTPRFP10586 1907 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 GTF2A2P52657 109 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 GUCY1B3Q02153 619 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 PKN1Q16512 942 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 CDC37Q16543 378 aaPredicted RBP14.96□□□□□ -0.01
CBWD6-208ENST00000494538 PFKFB3Q16875 520 aaPredicted RBP14.96□□□□□ -0.01
CBWD6-208ENST00000494538 PAXIP1Q6ZW49 1069 aaPredicted RBP14.96□□□□□ -0.01
CBWD6-208ENST00000494538 FASTKD5Q7L8L6 764 aaKnown RBP14.96□□□□□ -0.01
CBWD6-208ENST00000494538 HEATR3Q7Z4Q2 680 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 GPKOWQ92917 476 aaPredicted RBP eCLIP14.96□□□□□ -0.01
CBWD6-208ENST00000494538 USP17L15C9J2P7 530 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 USP17L13C9JLJ4 530 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 USP17L11C9JVI0 530 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 USP17L18D6R9N7 530 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 USP17L22D6RA61 530 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 USP17L17D6RBQ6 530 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 USP17L19D6RCP7 530 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 USP17L20D6RJB6 530 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 ZBTB5O15062 677 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 STX6O43752 255 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 PLA2G6O60733 806 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 XBP1P17861 261 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 DDIT3P35638 169 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 USP17L24Q0WX57 530 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 FOXD4L5Q5VV16 416 aaPredicted RBP14.96□□□□□ -0.01
CBWD6-208ENST00000494538 OTUD7BQ6GQQ9 843 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 PRPF38AQ8NAV1 312 aaKnown RBP14.96□□□□□ -0.01
CBWD6-208ENST00000494538 FOXD4L4Q8WXT5 416 aaPredicted RBP14.96□□□□□ -0.01
CBWD6-208ENST00000494538 GJB4Q9NTQ9 266 aa14.96□□□□□ -0.01
CBWD6-208ENST00000494538 CTDP1Q9Y5B0 961 aaPredicted RBP14.96□□□□□ -0.01
CBWD6-208ENST00000494538 CCL15-CCL14A0A0B4J2E2 113 aa14.95□□□□□ -0.02
CBWD6-208ENST00000494538 PNMA6FA0A0J9YX94 578 aa14.95□□□□□ -0.02
CBWD6-208ENST00000494538 CETPP11597 493 aa14.95□□□□□ -0.02
CBWD6-208ENST00000494538 GRM1Q13255 1194 aa14.95□□□□□ -0.02
CBWD6-208ENST00000494538 PKP1Q13835 747 aa14.95□□□□□ -0.02
CBWD6-208ENST00000494538 CCL15Q16663 113 aa14.95□□□□□ -0.02
CBWD6-208ENST00000494538 CCDC174Q6PII3 467 aa14.95□□□□□ -0.02
CBWD6-208ENST00000494538 CATSPERGQ6ZRH7 1159 aa14.95□□□□□ -0.02
CBWD6-208ENST00000494538 RASAL3Q86YV0 1011 aa14.95□□□□□ -0.02
CBWD6-208ENST00000494538 CHMP5Q9NZZ3 219 aa14.95□□□□□ -0.02
CBWD6-208ENST00000494538 VPS54Q9P1Q0 977 aa14.95□□□□□ -0.02
CBWD6-208ENST00000494538 COG2Q14746 738 aa14.94□□□□□ -0.02
CBWD6-208ENST00000494538 QRICH1Q2TAL8 776 aa14.94□□□□□ -0.02
CBWD6-208ENST00000494538 PPP1R9AQ9ULJ8 1098 aa14.94□□□□□ -0.02
CBWD6-208ENST00000494538 AGTPBP1Q9UPW5 1226 aa14.94□□□□□ -0.02
CBWD6-208ENST00000494538 LOC285556D6RIA3 1793 aa14.94□□□□□ -0.02
CBWD6-208ENST00000494538 IRX3P78415 501 aaPredicted RBP14.94□□□□□ -0.02
CBWD6-208ENST00000494538 NUCB2P80303 420 aa14.94□□□□□ -0.02
CBWD6-208ENST00000494538 WWC2Q6AWC2 1192 aa14.94□□□□□ -0.02
CBWD6-208ENST00000494538 MTMR8Q96EF0 704 aa14.94□□□□□ -0.02
CBWD6-208ENST00000494538 MS4A4AQ96JQ5 239 aa14.94□□□□□ -0.02
CBWD6-208ENST00000494538 CIZ1Q9ULV3 898 aaPredicted RBP14.94□□□□□ -0.02
CBWD6-208ENST00000494538 KCNJ14Q9UNX9 436 aa14.94□□□□□ -0.02
CBWD6-208ENST00000494538 APLP1P51693 650 aa14.93□□□□□ -0.02
CBWD6-208ENST00000494538 PABPC4Q13310 644 aaKnown RBP eCLIP14.93□□□□□ -0.02
CBWD6-208ENST00000494538 MOGSQ13724 837 aa14.93□□□□□ -0.02
CBWD6-208ENST00000494538 USH1GQ495M9 461 aa14.93□□□□□ -0.02
CBWD6-208ENST00000494538 KRT40Q6A162 431 aa14.93□□□□□ -0.02
CBWD6-208ENST00000494538 MCTP1Q6DN14 999 aa14.93□□□□□ -0.02
CBWD6-208ENST00000494538 FBXO11Q86XK2 927 aa14.93□□□□□ -0.02
CBWD6-208ENST00000494538 FBXO18Q8NFZ0 1043 aa14.93□□□□□ -0.02
CBWD6-208ENST00000494538 COA7Q96BR5 231 aa14.93□□□□□ -0.02
CBWD6-208ENST00000494538 ATG4CQ96DT6 458 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms