RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 STAG1Q8WVM7 1258 aa15.59■□□□□ 0.09
ERCC3-209ENST00000494464 HTATIP2Q9BUP3 242 aa15.59■□□□□ 0.09
ERCC3-209ENST00000494464 TEX13BQ9BXU2 312 aa15.59■□□□□ 0.09
ERCC3-209ENST00000494464 NBPF3Q9H094 633 aa15.59■□□□□ 0.09
ERCC3-209ENST00000494464 INCENPQ9NQS7 918 aa15.59■□□□□ 0.09
ERCC3-209ENST00000494464 SLC5A4Q9NY91 659 aa15.59■□□□□ 0.09
ERCC3-209ENST00000494464 OGDHLQ9ULD0 1010 aa15.59■□□□□ 0.09
ERCC3-209ENST00000494464 RAD50Q92878 1312 aa15.58■□□□□ 0.08
ERCC3-209ENST00000494464 FDX1P10109 184 aa15.58■□□□□ 0.08
ERCC3-209ENST00000494464 FCER1AP12319 257 aa15.58■□□□□ 0.08
ERCC3-209ENST00000494464 BMP3P12645 472 aa15.58■□□□□ 0.08
ERCC3-209ENST00000494464 AKNAD1Q5T1N1 836 aa15.58■□□□□ 0.08
ERCC3-209ENST00000494464 DSCC1Q9BVC3 393 aa15.58■□□□□ 0.08
ERCC3-209ENST00000494464 RNF41Q9H4P4 317 aaPredicted RBP15.58■□□□□ 0.08
ERCC3-209ENST00000494464 SLC38A10Q9HBR0 1119 aa15.58■□□□□ 0.08
ERCC3-209ENST00000494464 TCP11L1Q9NUJ3 509 aa15.58■□□□□ 0.08
ERCC3-209ENST00000494464 ALPK3Q96L96 1907 aa15.57■□□□□ 0.08
ERCC3-209ENST00000494464 NMT2O60551 498 aa15.57■□□□□ 0.08
ERCC3-209ENST00000494464 PLA2G6O60733 806 aa15.57■□□□□ 0.08
ERCC3-209ENST00000494464 COBLO75128 1261 aa15.57■□□□□ 0.08
ERCC3-209ENST00000494464 CCND3P30281 292 aaPredicted RBP15.57■□□□□ 0.08
ERCC3-209ENST00000494464 STAT2P52630 851 aa15.57■□□□□ 0.08
ERCC3-209ENST00000494464 OAZ1P54368 228 aa15.57■□□□□ 0.08
ERCC3-209ENST00000494464 HAND2P61296 217 aa15.57■□□□□ 0.08
ERCC3-209ENST00000494464 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.57■□□□□ 0.08
ERCC3-209ENST00000494464 TBC1D10CQ8IV04 446 aa15.57■□□□□ 0.08
ERCC3-209ENST00000494464 TOMM22Q9NS69 142 aa15.57■□□□□ 0.08
ERCC3-209ENST00000494464 MSCO60682 206 aa15.56■□□□□ 0.08
ERCC3-209ENST00000494464 ZBED4O75132 1171 aa15.56■□□□□ 0.08
ERCC3-209ENST00000494464 CYBAP13498 195 aa15.56■□□□□ 0.08
ERCC3-209ENST00000494464 SLC1A4P43007 532 aa15.56■□□□□ 0.08
ERCC3-209ENST00000494464 KCTD2Q14681 263 aa15.56■□□□□ 0.08
ERCC3-209ENST00000494464 C8orf34Q49A92 452 aa15.56■□□□□ 0.08
ERCC3-209ENST00000494464 RRP12Q5JTH9 1297 aaKnown RBP15.56■□□□□ 0.08
ERCC3-209ENST00000494464 SNRNP48Q6IEG0 339 aaKnown RBP15.56■□□□□ 0.08
ERCC3-209ENST00000494464 MFSD6Q6ZSS7 791 aa15.56■□□□□ 0.08
ERCC3-209ENST00000494464 FAM160B2Q86V87 743 aa15.56■□□□□ 0.08
ERCC3-209ENST00000494464 KIFC2Q96AC6 838 aa15.56■□□□□ 0.08
ERCC3-209ENST00000494464 MAML3Q96JK9 1138 aa15.56■□□□□ 0.08
ERCC3-209ENST00000494464 MMP19Q99542 508 aa15.56■□□□□ 0.08
ERCC3-209ENST00000494464 NEDD4P46934 1319 aa15.55■□□□□ 0.08
ERCC3-209ENST00000494464 TMEM232C9JQI7 657 aa15.55■□□□□ 0.08
ERCC3-209ENST00000494464 ZNF213O14771 459 aa15.55■□□□□ 0.08
ERCC3-209ENST00000494464 CYP2C19P33261 490 aa15.55■□□□□ 0.08
ERCC3-209ENST00000494464 MNX1P50219 401 aaPredicted RBP15.55■□□□□ 0.08
ERCC3-209ENST00000494464 LHX8Q68G74 356 aa15.55■□□□□ 0.08
ERCC3-209ENST00000494464 NECAB2Q7Z6G3 386 aa15.55■□□□□ 0.08
ERCC3-209ENST00000494464 CHURC1Q8WUH1 139 aa15.55■□□□□ 0.08
ERCC3-209ENST00000494464 PAWRQ96IZ0 340 aaKnown RBP15.55■□□□□ 0.08
ERCC3-209ENST00000494464 DIS3Q9Y2L1 958 aaKnown RBP15.55■□□□□ 0.08
ERCC3-209ENST00000494464 CTDP1Q9Y5B0 961 aaPredicted RBP15.55■□□□□ 0.08
ERCC3-209ENST00000494464 TOP1P11387 765 aaKnown RBP15.54■□□□□ 0.08
ERCC3-209ENST00000494464 MCCP23508 829 aa15.54■□□□□ 0.08
ERCC3-209ENST00000494464 RCSD1Q6JBY9 416 aa15.54■□□□□ 0.08
ERCC3-209ENST00000494464 DIS3LQ8TF46 1054 aaKnown RBP15.54■□□□□ 0.08
ERCC3-209ENST00000494464 DCAF4Q8WV16 495 aa15.54■□□□□ 0.08
ERCC3-209ENST00000494464 ESR2Q92731 530 aa15.54■□□□□ 0.08
ERCC3-209ENST00000494464 IL25Q9H293 177 aa15.54■□□□□ 0.08
ERCC3-209ENST00000494464 DDX20Q9UHI6 824 aaKnown RBP15.54■□□□□ 0.08
ERCC3-209ENST00000494464 RIPK3Q9Y572 518 aa15.54■□□□□ 0.08
ERCC3-209ENST00000494464 IMMTQ16891 758 aaKnown RBP15.53■□□□□ 0.08
ERCC3-209ENST00000494464 ZNF792Q3KQV3 632 aa15.53■□□□□ 0.08
ERCC3-209ENST00000494464 RASGRP2Q7LDG7 609 aa15.53■□□□□ 0.08
ERCC3-209ENST00000494464 CPXCR1Q8N123 301 aa15.53■□□□□ 0.08
ERCC3-209ENST00000494464 TRPV1Q8NER1 839 aa15.53■□□□□ 0.08
ERCC3-209ENST00000494464 TTC14Q96N46 770 aa15.53■□□□□ 0.08
ERCC3-209ENST00000494464 RAVER2Q9HCJ3 691 aaKnown RBP15.53■□□□□ 0.08
ERCC3-209ENST00000494464 FBXO40Q9UH90 709 aa15.53■□□□□ 0.08
ERCC3-209ENST00000494464 NRBP1Q9UHY1 535 aa15.53■□□□□ 0.08
ERCC3-209ENST00000494464 CTNNA3Q9UI47 895 aa15.53■□□□□ 0.08
ERCC3-209ENST00000494464 DNAJC25-GNG10A0A024R161 153 aa15.52■□□□□ 0.08
ERCC3-209ENST00000494464 IKQ13123 557 aaPredicted RBP15.52■□□□□ 0.08
ERCC3-209ENST00000494464 KCTD1Q719H9 257 aa15.52■□□□□ 0.08
ERCC3-209ENST00000494464 CHST13Q8NET6 341 aa15.52■□□□□ 0.08
ERCC3-209ENST00000494464 RUFY2Q8WXA3 655 aa15.52■□□□□ 0.08
ERCC3-209ENST00000494464 DPF3Q92784 378 aa15.52■□□□□ 0.08
ERCC3-209ENST00000494464 TMEM47Q9BQJ4 181 aa15.52■□□□□ 0.08
ERCC3-209ENST00000494464 ISY1Q9ULR0 285 aaKnown RBP15.52■□□□□ 0.08
ERCC3-209ENST00000494464 ZNF536O15090 1300 aa15.52■□□□□ 0.07
ERCC3-209ENST00000494464 SEPT4O43236 478 aa15.51■□□□□ 0.07
ERCC3-209ENST00000494464 PGK2P07205 417 aa15.51■□□□□ 0.07
ERCC3-209ENST00000494464 COL6A1P12109 1028 aa15.51■□□□□ 0.07
ERCC3-209ENST00000494464 CHMLP26374 656 aa15.51■□□□□ 0.07
ERCC3-209ENST00000494464 CCDC96Q2M329 555 aa15.51■□□□□ 0.07
ERCC3-209ENST00000494464 BTNL9Q6UXG8 535 aa15.51■□□□□ 0.07
ERCC3-209ENST00000494464 MSL3Q8N5Y2 521 aaKnown RBP15.51■□□□□ 0.07
ERCC3-209ENST00000494464 TINF2Q9BSI4 451 aa15.51■□□□□ 0.07
ERCC3-209ENST00000494464 C11orf49Q9H6J7 331 aa15.51■□□□□ 0.07
ERCC3-209ENST00000494464 PRR12Q9ULL5 1215 aa15.51■□□□□ 0.07
ERCC3-209ENST00000494464 NR2E3Q9Y5X4 410 aa15.51■□□□□ 0.07
ERCC3-209ENST00000494464 PFASO15067 1338 aa15.51■□□□□ 0.07
ERCC3-209ENST00000494464 H0YGN5 161 aa15.5■□□□□ 0.07
ERCC3-209ENST00000494464 SNHG28P0DPA3 235 aa15.5■□□□□ 0.07
ERCC3-209ENST00000494464 PDHBP11177 359 aa15.5■□□□□ 0.07
ERCC3-209ENST00000494464 CNGA1P29973 690 aa15.5■□□□□ 0.07
ERCC3-209ENST00000494464 TKFCQ3LXA3 575 aa15.5■□□□□ 0.07
ERCC3-209ENST00000494464 CCDC178Q5BJE1 867 aa15.5■□□□□ 0.07
ERCC3-209ENST00000494464 ZNF467Q7Z7K2 595 aaPredicted RBP15.5■□□□□ 0.07
ERCC3-209ENST00000494464 IQCA1Q86XH1 822 aa15.5■□□□□ 0.07
ERCC3-209ENST00000494464 DGKHQ86XP1 1220 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms