RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 SH3TC2Q8TF17 1288 aa27.5■■□□□ 1.99
CLIC3-203ENST00000494426 ARMC5Q96C12 935 aa27.5■■□□□ 1.99
CLIC3-203ENST00000494426 SENP2Q9HC62 589 aa27.5■■□□□ 1.99
CLIC3-203ENST00000494426 CCDC85CA6NKD9 419 aa27.49■■□□□ 1.99
CLIC3-203ENST00000494426 PTPREP23469 700 aa27.49■■□□□ 1.99
CLIC3-203ENST00000494426 ZNF543Q08ER8 600 aa27.49■■□□□ 1.99
CLIC3-203ENST00000494426 IFIT1BQ5T764 474 aaKnown RBP27.49■■□□□ 1.99
CLIC3-203ENST00000494426 WDR78Q5VTH9 848 aa27.49■■□□□ 1.99
CLIC3-203ENST00000494426 RNF20Q5VTR2 975 aa27.49■■□□□ 1.99
CLIC3-203ENST00000494426 IGDCC4Q8TDY8 1250 aa27.49■■□□□ 1.99
CLIC3-203ENST00000494426 KCNB2Q92953 911 aa27.49■■□□□ 1.99
CLIC3-203ENST00000494426 GPCPD1Q9NPB8 672 aa27.49■■□□□ 1.99
CLIC3-203ENST00000494426 PRR12Q9ULL5 1215 aa27.49■■□□□ 1.99
CLIC3-203ENST00000494426 IFIT3O14879 490 aaKnown RBP27.48■■□□□ 1.99
CLIC3-203ENST00000494426 ATP2A1O14983 1001 aa27.48■■□□□ 1.99
CLIC3-203ENST00000494426 ZBED4O75132 1171 aa27.48■■□□□ 1.99
CLIC3-203ENST00000494426 GRK4P32298 578 aa27.48■■□□□ 1.99
CLIC3-203ENST00000494426 SLC16A2P36021 539 aa27.48■■□□□ 1.99
CLIC3-203ENST00000494426 SLC9C1Q4G0N8 1177 aa27.48■■□□□ 1.99
CLIC3-203ENST00000494426 NUDT12Q9BQG2 462 aa27.48■■□□□ 1.99
CLIC3-203ENST00000494426 ADCY3O60266 1144 aa27.47■■□□□ 1.99
CLIC3-203ENST00000494426 REC8O95072 547 aa27.47■■□□□ 1.99
CLIC3-203ENST00000494426 SLC25A27O95847 323 aa27.47■■□□□ 1.99
CLIC3-203ENST00000494426 HSPA4P34932 840 aa27.47■■□□□ 1.99
CLIC3-203ENST00000494426 IKQ13123 557 aaPredicted RBP27.47■■□□□ 1.99
CLIC3-203ENST00000494426 NCAPG2Q86XI2 1143 aa27.47■■□□□ 1.99
CLIC3-203ENST00000494426 CPXCR1Q8N123 301 aa27.47■■□□□ 1.99
CLIC3-203ENST00000494426 PXYLP1Q8TE99 480 aa27.47■■□□□ 1.99
CLIC3-203ENST00000494426 MROH8Q9H579 483 aa27.47■■□□□ 1.99
CLIC3-203ENST00000494426 RAVER2Q9HCJ3 691 aaKnown RBP27.47■■□□□ 1.99
CLIC3-203ENST00000494426 GPHNQ9NQX3 736 aaPredicted RBP27.47■■□□□ 1.99
CLIC3-203ENST00000494426 RIPK3Q9Y572 518 aa27.47■■□□□ 1.99
CLIC3-203ENST00000494426 SLC15A5A6NIM6 579 aa27.46■■□□□ 1.99
CLIC3-203ENST00000494426 GOLGA8HP0CJ92 632 aa27.46■■□□□ 1.99
CLIC3-203ENST00000494426 FDX1P10109 184 aa27.46■■□□□ 1.99
CLIC3-203ENST00000494426 ELNP15502 786 aa27.46■■□□□ 1.99
CLIC3-203ENST00000494426 CYP2B6P20813 491 aa27.46■■□□□ 1.99
CLIC3-203ENST00000494426 SNAP25P60880 206 aa27.46■■□□□ 1.99
CLIC3-203ENST00000494426 GRB14Q14449 540 aa27.46■■□□□ 1.99
CLIC3-203ENST00000494426 ADCK5Q3MIX3 580 aa27.46■■□□□ 1.99
CLIC3-203ENST00000494426 SOCS4Q8WXH5 440 aa27.46■■□□□ 1.99
CLIC3-203ENST00000494426 ZNF333Q96JL9 665 aa27.46■■□□□ 1.99
CLIC3-203ENST00000494426 TEX13BQ9BXU2 312 aa27.46■■□□□ 1.99
CLIC3-203ENST00000494426 CWC22Q9HCG8 908 aaKnown RBP27.46■■□□□ 1.99
CLIC3-203ENST00000494426 ZNF536O15090 1300 aa27.45■■□□□ 1.99
CLIC3-203ENST00000494426 PRC1O43663 620 aa27.45■■□□□ 1.98
CLIC3-203ENST00000494426 MCM5P33992 734 aa27.45■■□□□ 1.98
CLIC3-203ENST00000494426 WTAPQ15007 396 aa27.45■■□□□ 1.98
CLIC3-203ENST00000494426 TMEM67Q5HYA8 995 aa27.45■■□□□ 1.98
CLIC3-203ENST00000494426 SNRNP48Q6IEG0 339 aaKnown RBP27.45■■□□□ 1.98
CLIC3-203ENST00000494426 SLAIN1Q8ND83 568 aa27.45■■□□□ 1.98
CLIC3-203ENST00000494426 ZNFX1Q9P2E3 1918 aaKnown RBP27.45■■□□□ 1.98
CLIC3-203ENST00000494426 ZNF236Q9UL36 1845 aa27.44■■□□□ 1.98
CLIC3-203ENST00000494426 STRNO43815 780 aa27.44■■□□□ 1.98
CLIC3-203ENST00000494426 OAZ1P54368 228 aa27.44■■□□□ 1.98
CLIC3-203ENST00000494426 MAP2K5Q13163 448 aa27.44■■□□□ 1.98
CLIC3-203ENST00000494426 SYDE2Q5VT97 1194 aa27.44■■□□□ 1.98
CLIC3-203ENST00000494426 NBPF11Q86T75 865 aa27.44■■□□□ 1.98
CLIC3-203ENST00000494426 NEK1Q96PY6 1258 aa27.44■■□□□ 1.98
CLIC3-203ENST00000494426 MTA3Q9BTC8 594 aa27.44■■□□□ 1.98
CLIC3-203ENST00000494426 CTDP1Q9Y5B0 961 aaPredicted RBP27.44■■□□□ 1.98
CLIC3-203ENST00000494426 IVNS1ABPQ9Y6Y0 642 aa27.44■■□□□ 1.98
CLIC3-203ENST00000494426 ERICH2A1L162 156 aa27.43■■□□□ 1.98
CLIC3-203ENST00000494426 EPB41L2O43491 1005 aaKnown RBP27.43■■□□□ 1.98
CLIC3-203ENST00000494426 XRCC5P13010 732 aaKnown RBP27.43■■□□□ 1.98
CLIC3-203ENST00000494426 RGS2P41220 211 aa27.43■■□□□ 1.98
CLIC3-203ENST00000494426 SART3Q15020 963 aaKnown RBP27.43■■□□□ 1.98
CLIC3-203ENST00000494426 GPATCH4Q5T3I0 446 aaKnown RBP27.43■■□□□ 1.98
CLIC3-203ENST00000494426 USP26Q9BXU7 913 aa27.43■■□□□ 1.98
CLIC3-203ENST00000494426 RANBP17Q9H2T7 1088 aaKnown RBP27.43■■□□□ 1.98
CLIC3-203ENST00000494426 CPVLQ9H3G5 476 aa27.43■■□□□ 1.98
CLIC3-203ENST00000494426 LY9Q9HBG7 655 aa27.43■■□□□ 1.98
CLIC3-203ENST00000494426 SNX14Q9Y5W7 946 aa27.43■■□□□ 1.98
CLIC3-203ENST00000494426 ZKSCAN1P17029 563 aaPredicted RBP27.42■■□□□ 1.98
CLIC3-203ENST00000494426 AGBL1Q96MI9 1066 aa27.42■■□□□ 1.98
CLIC3-203ENST00000494426 UBA5Q9GZZ9 404 aa27.42■■□□□ 1.98
CLIC3-203ENST00000494426 SH2B2O14492 632 aaPredicted RBP27.41■■□□□ 1.98
CLIC3-203ENST00000494426 ADORA2AP29274 412 aa27.41■■□□□ 1.98
CLIC3-203ENST00000494426 COPB2P35606 906 aa27.41■■□□□ 1.98
CLIC3-203ENST00000494426 SLC4A3P48751 1232 aa27.41■■□□□ 1.98
CLIC3-203ENST00000494426 EXOSC10Q01780 885 aaKnown RBP27.41■■□□□ 1.98
CLIC3-203ENST00000494426 ASPRV1Q53RT3 343 aa27.41■■□□□ 1.98
CLIC3-203ENST00000494426 CCDC174Q6PII3 467 aa27.41■■□□□ 1.98
CLIC3-203ENST00000494426 ABRAQ8N0Z2 381 aa27.41■■□□□ 1.98
CLIC3-203ENST00000494426 NPLOC4Q8TAT6 608 aa27.41■■□□□ 1.98
CLIC3-203ENST00000494426 TRIB2Q92519 343 aa27.41■■□□□ 1.98
CLIC3-203ENST00000494426 TMEM87BQ96K49 555 aa27.41■■□□□ 1.98
CLIC3-203ENST00000494426 SMCHD1A6NHR9 2005 aa27.41■■□□□ 1.98
CLIC3-203ENST00000494426 CENPFP49454 3210 aa27.41■■□□□ 1.98
CLIC3-203ENST00000494426 COBLO75128 1261 aa27.4■■□□□ 1.98
CLIC3-203ENST00000494426 SLC34A2O95436 690 aa27.4■■□□□ 1.98
CLIC3-203ENST00000494426 HOXC6P09630 235 aa27.4■■□□□ 1.98
CLIC3-203ENST00000494426 PARP1P09874 1014 aaKnown RBP27.4■■□□□ 1.98
CLIC3-203ENST00000494426 TROAPQ12815 778 aa27.4■■□□□ 1.98
CLIC3-203ENST00000494426 KRT32Q14532 448 aa27.4■■□□□ 1.98
CLIC3-203ENST00000494426 MTFR1Q15390 333 aa27.4■■□□□ 1.98
CLIC3-203ENST00000494426 CCL14Q16627 93 aa27.4■■□□□ 1.98
CLIC3-203ENST00000494426 STAG2Q8N3U4 1231 aa27.4■■□□□ 1.98
CLIC3-203ENST00000494426 APBA2Q99767 749 aa27.4■■□□□ 1.98
CLIC3-203ENST00000494426 LRRC2Q9BYS8 371 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms