RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 GNPTABQ3T906 1256 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 ATP13A4Q4VNC1 1196 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 PRR16Q569H4 304 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 SPECC1Q5M775 1068 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 RASIP1Q5U651 963 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 LLGL2Q6P1M3 1020 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 NSMFQ6X4W1 530 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 C1orf122Q6ZSJ8 110 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 OTOP3Q7RTS5 596 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 SRGAP1Q7Z6B7 1085 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 CMTR2Q8IYT2 770 aaKnown RBP8.12□□□□□ -1.11
SNX13-210ENST00000494402 GSTCDQ8NEC7 633 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 KIFC2Q96AC6 838 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 GCC1Q96CN9 775 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 KLRG1Q96E93 195 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 ZNF576Q9H609 170 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 SLC52A2Q9HAB3 445 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 LRP2BPQ9P2M1 347 aa8.12□□□□□ -1.11
SNX13-210ENST00000494402 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.12□□□□□ -1.11
SNX13-210ENST00000494402 LCE2BO14633 110 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 PRODHO43272 600 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 CFBP00751 764 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 PABPC1P11940 636 aaKnown RBP8.11□□□□□ -1.11
SNX13-210ENST00000494402 NME2P22392 152 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 GRNP28799 593 aaKnown RBP8.11□□□□□ -1.11
SNX13-210ENST00000494402 USP14P54578 494 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 BTKQ06187 659 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 PCBP2Q15366 365 aaKnown RBP eCLIP8.11□□□□□ -1.11
SNX13-210ENST00000494402 SPRED3Q2MJR0 410 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 ARMC3Q5W041 872 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 MSL1Q68DK7 614 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 CDCA2Q69YH5 1023 aaPredicted RBP8.11□□□□□ -1.11
SNX13-210ENST00000494402 FGD2Q7Z6J4 655 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 EHBP1Q8NDI1 1231 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 OR13H1Q8NG92 308 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.11□□□□□ -1.11
SNX13-210ENST00000494402 GAL3ST3Q96A11 431 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 SGCZQ96LD1 299 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 CCDC138Q96M89 665 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 CNTNAP3BQ96NU0 1288 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 CNTNAP3Q9BZ76 1288 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 SLC12A5Q9H2X9 1139 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 GMIPQ9P107 970 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 DIS3Q9Y2L1 958 aaKnown RBP8.11□□□□□ -1.11
SNX13-210ENST00000494402 AFG3L2Q9Y4W6 797 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 LRRFIP2Q9Y608 721 aaKnown RBP8.11□□□□□ -1.11
SNX13-210ENST00000494402 SLC4A7Q9Y6M7 1214 aa8.11□□□□□ -1.11
SNX13-210ENST00000494402 A0A096LPE4 126 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 A0A1B0GVC2 190 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 A0A1W2PPZ6 126 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 FAM170AA1A519 330 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 CTNND1O60716 968 aaKnown RBP8.1□□□□□ -1.11
SNX13-210ENST00000494402 HTR3BO95264 441 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 ADH1CP00326 375 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 NME1P15531 152 aaKnown RBP8.1□□□□□ -1.11
SNX13-210ENST00000494402 TM4SF4P48230 202 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 IL2P60568 153 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 NCAPG2Q86XI2 1143 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 KIF18BQ86Y91 864 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 SLC41A1Q8IVJ1 513 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 MPNDQ8N594 471 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 KIAA1958Q8N8K9 716 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 KDF1Q8NAX2 398 aaPredicted RBP8.1□□□□□ -1.11
SNX13-210ENST00000494402 CRB3Q9BUF7 120 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 OSBPL5Q9H0X9 879 aaPredicted RBP8.1□□□□□ -1.11
SNX13-210ENST00000494402 ZNF214Q9UL59 606 aaPredicted RBP8.1□□□□□ -1.11
SNX13-210ENST00000494402 LRCH1Q9Y2L9 728 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 TTLL3Q9Y4R7 772 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 MRFAP1Q9Y605 127 aa8.1□□□□□ -1.11
SNX13-210ENST00000494402 SETD1BQ9UPS6 1966 aaKnown RBP8.1□□□□□ -1.11
SNX13-210ENST00000494402 PRR36Q9H6K5 1346 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 C6orf222P0C671 652 aaPredicted RBP8.09□□□□□ -1.11
SNX13-210ENST00000494402 CHKAP35790 457 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 PTGIRP43119 386 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 FAM193AP78312 1265 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 PRKG2Q13237 762 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 TUBB8Q3ZCM7 444 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 C4orf17Q53FE4 359 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 IFIT1BQ5T764 474 aaKnown RBP8.09□□□□□ -1.11
SNX13-210ENST00000494402 INTS11Q5TA45 600 aaKnown RBP8.09□□□□□ -1.11
SNX13-210ENST00000494402 SCARA3Q6AZY7 606 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 OVOS1Q6IE37 1185 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 CASC1Q6TDU7 716 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 NLRC3Q7RTR2 1065 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 CHCHD4Q8N4Q1 142 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 C1orf162Q8NEQ5 155 aaPredicted RBP8.09□□□□□ -1.11
SNX13-210ENST00000494402 SLC35G2Q8TBE7 412 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 AHCYL2Q96HN2 611 aaKnown RBP8.09□□□□□ -1.11
SNX13-210ENST00000494402 FAXDC2Q96IV6 333 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 WNK4Q96J92 1243 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 TSPAN18Q96SJ8 248 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 ORAI3Q9BRQ5 295 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 BHLHE41Q9C0J9 482 aaPredicted RBP8.09□□□□□ -1.11
SNX13-210ENST00000494402 FAM204AQ9H8W3 233 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 DNM3Q9UQ16 869 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 GJA3Q9Y6H8 435 aa8.09□□□□□ -1.11
SNX13-210ENST00000494402 ANKRD34BA5PLL1 514 aa8.08□□□□□ -1.12
SNX13-210ENST00000494402 TPP1O14773 563 aa8.08□□□□□ -1.12
SNX13-210ENST00000494402 TNFRSF10CO14798 259 aa8.08□□□□□ -1.12
SNX13-210ENST00000494402 ULK1O75385 1050 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms