RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 NOL6Q9H6R4 1146 aaKnown RBP8.57□□□□□ -1.04
SMC2-205ENST00000493955 TYW1Q9NV66 732 aaKnown RBP8.57□□□□□ -1.04
SMC2-205ENST00000493955 TPX2Q9ULW0 747 aaKnown RBP8.57□□□□□ -1.04
SMC2-205ENST00000493955 CNTNAP5Q8WYK1 1306 aa8.57□□□□□ -1.04
SMC2-205ENST00000493955 MARCH6O60337 910 aa8.56□□□□□ -1.04
SMC2-205ENST00000493955 BMP3P12645 472 aa8.56□□□□□ -1.04
SMC2-205ENST00000493955 MAP4P27816 1152 aaKnown RBP8.56□□□□□ -1.04
SMC2-205ENST00000493955 GRB10Q13322 594 aa8.56□□□□□ -1.04
SMC2-205ENST00000493955 SNW1Q13573 536 aaKnown RBP8.56□□□□□ -1.04
SMC2-205ENST00000493955 PLEKHG6Q3KR16 790 aa8.56□□□□□ -1.04
SMC2-205ENST00000493955 TRIM61Q5EBN2 209 aa8.56□□□□□ -1.04
SMC2-205ENST00000493955 CT47A1Q5JQC4 288 aaPredicted RBP8.56□□□□□ -1.04
SMC2-205ENST00000493955 GTF2IRD2BQ6EKJ0 949 aa8.56□□□□□ -1.04
SMC2-205ENST00000493955 GTF2IRD2Q86UP8 949 aa8.56□□□□□ -1.04
SMC2-205ENST00000493955 FIBCD1Q8N539 461 aa8.56□□□□□ -1.04
SMC2-205ENST00000493955 MAGEC2Q9UBF1 373 aaPredicted RBP8.56□□□□□ -1.04
SMC2-205ENST00000493955 DIS3Q9Y2L1 958 aaKnown RBP8.56□□□□□ -1.04
SMC2-205ENST00000493955 FAM95CA0A1B0GW59 222 aa8.55□□□□□ -1.04
SMC2-205ENST00000493955 GSG1L2A8MUP6 293 aa8.55□□□□□ -1.04
SMC2-205ENST00000493955 KCNQ2O43526 872 aa8.55□□□□□ -1.04
SMC2-205ENST00000493955 EOMESO95936 686 aa8.55□□□□□ -1.04
SMC2-205ENST00000493955 ITGB2P05107 769 aa8.55□□□□□ -1.04
SMC2-205ENST00000493955 C6orf222P0C671 652 aaPredicted RBP8.55□□□□□ -1.04
SMC2-205ENST00000493955 PPP2R5DQ14738 602 aa8.55□□□□□ -1.04
SMC2-205ENST00000493955 RNF180Q86T96 592 aa8.55□□□□□ -1.04
SMC2-205ENST00000493955 LRRTM3Q86VH5 581 aa8.55□□□□□ -1.04
SMC2-205ENST00000493955 KCTD13Q8WZ19 329 aa8.55□□□□□ -1.04
SMC2-205ENST00000493955 IRF2BPLQ9H1B7 796 aa8.55□□□□□ -1.04
SMC2-205ENST00000493955 C1GALT1Q9NS00 363 aa8.55□□□□□ -1.04
SMC2-205ENST00000493955 GFOD1Q9NXC2 390 aa8.55□□□□□ -1.04
SMC2-205ENST00000493955 MAPRE3Q9UPY8 281 aa8.55□□□□□ -1.04
SMC2-205ENST00000493955 ATP8A1Q9Y2Q0 1164 aa8.55□□□□□ -1.04
SMC2-205ENST00000493955 DLX3O60479 287 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 GFRA1P56159 465 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 GABREP78334 506 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 MBTPS1Q14703 1052 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 DZIP1LQ8IYY4 767 aaKnown RBP8.54□□□□□ -1.04
SMC2-205ENST00000493955 CCDC140Q96MF4 163 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 DSCC1Q9BVC3 393 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 DUSP23Q9BVJ7 150 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 TARS2Q9BW92 718 aaKnown RBP8.54□□□□□ -1.04
SMC2-205ENST00000493955 NKX2-4Q9H2Z4 354 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 LRRN2O75325 713 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 PDGFRBP09619 1106 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 SDSP20132 328 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 POU3F3P20264 500 aaPredicted RBP8.54□□□□□ -1.04
SMC2-205ENST00000493955 HOXC12P31275 282 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 MAP4K2Q12851 820 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 ADGRE1Q14246 886 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 JAMLQ86YT9 394 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 FAM20CQ8IXL6 584 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 ARMC10Q8N2F6 343 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 PRPF38AQ8NAV1 312 aaKnown RBP8.54□□□□□ -1.04
SMC2-205ENST00000493955 GIMAP7Q8NHV1 300 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 ZDHHC15Q96MV8 337 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 TRIM39Q9HCM9 518 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 NDOR1Q9UHB4 597 aa8.54□□□□□ -1.04
SMC2-205ENST00000493955 SF3B6Q9Y3B4 125 aaKnown RBP8.54□□□□□ -1.04
SMC2-205ENST00000493955 SIGLEC6O43699 453 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 EFCAB14O75071 495 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 SNRPB2P08579 225 aaKnown RBP8.53□□□□□ -1.04
SMC2-205ENST00000493955 COL8A1P27658 744 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 AMPD2Q01433 879 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 SF1Q15637 639 aaKnown RBP8.53□□□□□ -1.04
SMC2-205ENST00000493955 CNNM4Q6P4Q7 775 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 PAOXQ6QHF9 649 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 BRAPQ7Z569 592 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 DTWD2Q8NBA8 298 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 GSTCDQ8NEC7 633 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 MEGF10Q96KG7 1140 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 FAM126AQ9BYI3 521 aaPredicted RBP8.53□□□□□ -1.04
SMC2-205ENST00000493955 KCNF1Q9H3M0 494 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 SLC52A2Q9HAB3 445 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 PRDM5Q9NQX1 630 aaPredicted RBP8.53□□□□□ -1.04
SMC2-205ENST00000493955 HOMER2Q9NSB8 354 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 MCM8Q9UJA3 840 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 KCNH3Q9ULD8 1083 aa8.53□□□□□ -1.04
SMC2-205ENST00000493955 DNAJC8O75937 253 aaPredicted RBP8.52□□□□□ -1.05
SMC2-205ENST00000493955 PROCP04070 461 aa8.52□□□□□ -1.05
SMC2-205ENST00000493955 S100BP04271 92 aaPredicted RBP8.52□□□□□ -1.05
SMC2-205ENST00000493955 SCG5P05408 212 aa8.52□□□□□ -1.05
SMC2-205ENST00000493955 KIR3DL1P43629 444 aa8.52□□□□□ -1.05
SMC2-205ENST00000493955 KCNJ6P48051 423 aa8.52□□□□□ -1.05
SMC2-205ENST00000493955 CDKN1CP49918 316 aaPredicted RBP8.52□□□□□ -1.05
SMC2-205ENST00000493955 NFKB2Q00653 900 aa8.52□□□□□ -1.05
SMC2-205ENST00000493955 NFKBIBQ15653 356 aa8.52□□□□□ -1.05
SMC2-205ENST00000493955 SFRP5Q5T4F7 317 aa8.52□□□□□ -1.05
SMC2-205ENST00000493955 TMC3Q7Z5M5 1100 aa8.52□□□□□ -1.05
SMC2-205ENST00000493955 FERMT3Q86UX7 667 aa8.52□□□□□ -1.05
SMC2-205ENST00000493955 PPM1KQ8N3J5 372 aa8.52□□□□□ -1.05
SMC2-205ENST00000493955 UBR7Q8N806 425 aa8.52□□□□□ -1.05
SMC2-205ENST00000493955 SLC7A14Q8TBB6 771 aa8.52□□□□□ -1.05
SMC2-205ENST00000493955 PTPRN2Q92932 1015 aa8.52□□□□□ -1.05
SMC2-205ENST00000493955 GPR55Q9Y2T6 319 aaPredicted RBP8.52□□□□□ -1.05
SMC2-205ENST00000493955 LEFTY1O75610 366 aa8.51□□□□□ -1.05
SMC2-205ENST00000493955 CPP00450 1065 aa8.51□□□□□ -1.05
SMC2-205ENST00000493955 ITIH2P19823 946 aa8.51□□□□□ -1.05
SMC2-205ENST00000493955 MAMDC2Q7Z304 686 aaPredicted RBP8.51□□□□□ -1.05
SMC2-205ENST00000493955 TXNRD3Q86VQ6 643 aa8.51□□□□□ -1.05
SMC2-205ENST00000493955 TMEM145Q8NBT3 493 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms