RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 ATRNL1Q5VV63 1379 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 ZBED9Q6R2W3 1325 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 TNPO2O14787 897 aaKnown RBP9.17□□□□□ -0.94
RBM39-238ENST00000493853 HMMRO75330 724 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 WFS1O76024 890 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 BCRP11274 1271 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 BMP2P12643 396 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 USP5P45974 858 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 RAB15P59190 212 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 DHX9Q08211 1270 aaKnown RBP9.17□□□□□ -0.94
RBM39-238ENST00000493853 MAP3K12Q12852 859 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 NBPF20Q3BBV1 942 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 CEP85Q6P2H3 762 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 AACSQ86V21 672 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 EAF2Q96CJ1 260 aaPredicted RBP9.17□□□□□ -0.94
RBM39-238ENST00000493853 RNF208Q9H0X6 261 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 TMOD4Q9NZQ9 345 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.17□□□□□ -0.94
RBM39-238ENST00000493853 AGTPBP1Q9UPW5 1226 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 EXOC6BQ9Y2D4 811 aa9.17□□□□□ -0.94
RBM39-238ENST00000493853 ADGRA2Q96PE1 1338 aa9.16□□□□□ -0.94
RBM39-238ENST00000493853 APBB1O00213 710 aa9.16□□□□□ -0.94
RBM39-238ENST00000493853 ASNSP08243 561 aa9.16□□□□□ -0.94
RBM39-238ENST00000493853 CTGFP29279 349 aa9.16□□□□□ -0.94
RBM39-238ENST00000493853 GCLCP48506 637 aaPredicted RBP9.16□□□□□ -0.94
RBM39-238ENST00000493853 HMGCS2P54868 508 aa9.16□□□□□ -0.94
RBM39-238ENST00000493853 PRKCZQ05513 592 aa9.16□□□□□ -0.94
RBM39-238ENST00000493853 MTFR1Q15390 333 aa9.16□□□□□ -0.94
RBM39-238ENST00000493853 INTS6LQ5JSJ4 861 aaKnown RBP9.16□□□□□ -0.94
RBM39-238ENST00000493853 LINC00528Q8N1L1 170 aa9.16□□□□□ -0.94
RBM39-238ENST00000493853 MEIOBQ8N635 442 aa9.16□□□□□ -0.94
RBM39-238ENST00000493853 ANKRD13CQ8N6S4 541 aa9.16□□□□□ -0.94
RBM39-238ENST00000493853 MAGEB6Q8N7X4 407 aa9.16□□□□□ -0.94
RBM39-238ENST00000493853 MIGA1Q8NAN2 632 aa9.16□□□□□ -0.94
RBM39-238ENST00000493853 PIH1D3Q9NQM4 214 aaKnown RBP9.16□□□□□ -0.94
RBM39-238ENST00000493853 TLR7Q9NYK1 1049 aaKnown RBP9.16□□□□□ -0.94
RBM39-238ENST00000493853 SAP30BPQ9UHR5 308 aaKnown RBP9.16□□□□□ -0.94
RBM39-238ENST00000493853 DBNLQ9UJU6 430 aaKnown RBP9.16□□□□□ -0.94
RBM39-238ENST00000493853 PALD1Q9ULE6 856 aa9.16□□□□□ -0.94
RBM39-238ENST00000493853 RFX7Q2KHR2 1363 aa9.15□□□□□ -0.94
RBM39-238ENST00000493853 FLT1P17948 1338 aa9.15□□□□□ -0.94
RBM39-238ENST00000493853 ZBBXA8MT70 800 aa9.15□□□□□ -0.94
RBM39-238ENST00000493853 TERTO14746 1132 aaKnown RBP9.15□□□□□ -0.94
RBM39-238ENST00000493853 ADCY3O60266 1144 aa9.15□□□□□ -0.94
RBM39-238ENST00000493853 IFIT2P09913 472 aaKnown RBP9.15□□□□□ -0.94
RBM39-238ENST00000493853 CCL5P13501 91 aa9.15□□□□□ -0.94
RBM39-238ENST00000493853 FLT3LGP49771 235 aa9.15□□□□□ -0.94
RBM39-238ENST00000493853 DYNLL1P63167 89 aaKnown RBP9.15□□□□□ -0.94
RBM39-238ENST00000493853 IRX3P78415 501 aaPredicted RBP9.15□□□□□ -0.94
RBM39-238ENST00000493853 TTF1Q15361 905 aaPredicted RBP9.15□□□□□ -0.94
RBM39-238ENST00000493853 TREML2Q5T2D2 321 aa9.15□□□□□ -0.94
RBM39-238ENST00000493853 CCAR1Q8IX12 1150 aaKnown RBP9.15□□□□□ -0.94
RBM39-238ENST00000493853 RPAP2Q8IXW5 612 aaPredicted RBP9.15□□□□□ -0.94
RBM39-238ENST00000493853 CLASRPQ8N2M8 674 aaKnown RBP9.15□□□□□ -0.94
RBM39-238ENST00000493853 IL1RAPL2Q9NP60 686 aa9.15□□□□□ -0.94
RBM39-238ENST00000493853 GINM1Q9NU53 330 aa9.15□□□□□ -0.94
RBM39-238ENST00000493853 DDX19BQ9UMR2 479 aa9.15□□□□□ -0.94
RBM39-238ENST00000493853 OTOFQ9HC10 1997 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 C19orf81C9J6K1 198 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 USP17L10C9JJH3 530 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 GJB1P08034 283 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 BACE1P56817 501 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 FAM110CQ1W6H9 321 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 TMED8Q6PL24 325 aaPredicted RBP9.14□□□□□ -0.95
RBM39-238ENST00000493853 ADGRA1Q86SQ6 560 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 TTC6Q86TZ1 520 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 RHPN1Q8TCX5 695 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 DPF3Q92784 378 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 KIF1BPQ96EK5 621 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 WDR18Q9BV38 432 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 ASCC2Q9H1I8 757 aaPredicted RBP9.14□□□□□ -0.95
RBM39-238ENST00000493853 CWC22Q9HCG8 908 aaKnown RBP9.14□□□□□ -0.95
RBM39-238ENST00000493853 CABP5Q9NP86 173 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 GABRQQ9UN88 632 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 COG6Q9Y2V7 657 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 PCDHB9Q9Y5E1 797 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 NDUFB9Q9Y6M9 179 aa9.14□□□□□ -0.95
RBM39-238ENST00000493853 COL2A1P02458 1487 aaPredicted RBP9.14□□□□□ -0.95
RBM39-238ENST00000493853 RAB11FIP3O75154 756 aa9.13□□□□□ -0.95
RBM39-238ENST00000493853 GDF11O95390 407 aa9.13□□□□□ -0.95
RBM39-238ENST00000493853 TFRCP02786 760 aaKnown RBP9.13□□□□□ -0.95
RBM39-238ENST00000493853 POLR3DP05423 398 aaPredicted RBP9.13□□□□□ -0.95
RBM39-238ENST00000493853 ELNP15502 786 aa9.13□□□□□ -0.95
RBM39-238ENST00000493853 NFX1Q12986 1120 aaKnown RBP9.13□□□□□ -0.95
RBM39-238ENST00000493853 CBLBQ13191 982 aa9.13□□□□□ -0.95
RBM39-238ENST00000493853 RRP1BQ14684 758 aaKnown RBP9.13□□□□□ -0.95
RBM39-238ENST00000493853 DNAJC2Q99543 621 aaKnown RBP9.13□□□□□ -0.95
RBM39-238ENST00000493853 TSEN34Q9BSV6 310 aaKnown RBP9.13□□□□□ -0.95
RBM39-238ENST00000493853 HTATIP2Q9BUP3 242 aa9.13□□□□□ -0.95
RBM39-238ENST00000493853 CRNKL1Q9BZJ0 848 aaKnown RBP9.13□□□□□ -0.95
RBM39-238ENST00000493853 AK9Q5TCS8 1911 aa9.13□□□□□ -0.95
RBM39-238ENST00000493853 SOBPA7XYQ1 873 aa9.12□□□□□ -0.95
RBM39-238ENST00000493853 TNRC18O15417 2968 aaPredicted RBP9.12□□□□□ -0.95
RBM39-238ENST00000493853 MAN1A2O60476 641 aa9.12□□□□□ -0.95
RBM39-238ENST00000493853 FBXO45P0C2W1 286 aa9.12□□□□□ -0.95
RBM39-238ENST00000493853 CAPN2P17655 700 aa9.12□□□□□ -0.95
RBM39-238ENST00000493853 GJA8P48165 433 aa9.12□□□□□ -0.95
RBM39-238ENST00000493853 IRF5Q13568 498 aa9.12□□□□□ -0.95
RBM39-238ENST00000493853 RAB3GAP1Q15042 981 aa9.12□□□□□ -0.95
RBM39-238ENST00000493853 CERKLQ49MI3 558 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms