RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 XRCC5P13010 732 aaKnown RBP11.12□□□□□ -0.63
SGIP1-213ENST00000493564 ZKSCAN1P17029 563 aaPredicted RBP11.12□□□□□ -0.63
SGIP1-213ENST00000493564 SLC16A2P36021 539 aa11.12□□□□□ -0.63
SGIP1-213ENST00000493564 NOVP48745 357 aa11.12□□□□□ -0.63
SGIP1-213ENST00000493564 GRB14Q14449 540 aa11.12□□□□□ -0.63
SGIP1-213ENST00000493564 PPP4R3BQ5MIZ7 849 aa11.12□□□□□ -0.63
SGIP1-213ENST00000493564 SNRNP48Q6IEG0 339 aaKnown RBP11.12□□□□□ -0.63
SGIP1-213ENST00000493564 RCSD1Q6JBY9 416 aa11.12□□□□□ -0.63
SGIP1-213ENST00000493564 RIOX2Q8IUF8 465 aa11.12□□□□□ -0.63
SGIP1-213ENST00000493564 MROH8Q9H579 483 aa11.12□□□□□ -0.63
SGIP1-213ENST00000493564 ZNF214Q9UL59 606 aaPredicted RBP11.12□□□□□ -0.63
SGIP1-213ENST00000493564 SYNPO2Q9UMS6 1093 aa11.12□□□□□ -0.63
SGIP1-213ENST00000493564 PLXNB2O15031 1838 aa11.12□□□□□ -0.63
SGIP1-213ENST00000493564 RAD50Q92878 1312 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 STRNO43815 780 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 SLC25A27O95847 323 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 GJB1P08034 283 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 CYP21A2P08686 494 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 PCP11498 1178 aaKnown RBP11.11□□□□□ -0.63
SGIP1-213ENST00000493564 FCER1AP12319 257 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 PRKAR2AP13861 404 aaKnown RBP11.11□□□□□ -0.63
SGIP1-213ENST00000493564 TAL1P17542 331 aaPredicted RBP11.11□□□□□ -0.63
SGIP1-213ENST00000493564 CYP2C19P33261 490 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 STAT2P52630 851 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 CACNB2Q08289 660 aaPredicted RBP11.11□□□□□ -0.63
SGIP1-213ENST00000493564 CCDC174Q6PII3 467 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 KIAA1211Q6ZU35 1233 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 SHCBP1Q8NEM2 672 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 U2AF1L4Q8WU68 220 aaKnown RBP11.11□□□□□ -0.63
SGIP1-213ENST00000493564 CHURC1Q8WUH1 139 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 MAP4K1Q92918 833 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 GMCL1Q96IK5 515 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 AGBL1Q96MI9 1066 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 ZSCAN10Q96SZ4 725 aaPredicted RBP11.11□□□□□ -0.63
SGIP1-213ENST00000493564 MMP19Q99542 508 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 APBA2Q99767 749 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 ESYT1Q9BSJ8 1104 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 KRT23Q9C075 422 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 SLC38A10Q9HBR0 1119 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 HMX1Q9NP08 348 aaPredicted RBP11.11□□□□□ -0.63
SGIP1-213ENST00000493564 HOMER2Q9NSB8 354 aa11.11□□□□□ -0.63
SGIP1-213ENST00000493564 U3KPZ7 1027 aaPredicted RBP11.11□□□□□ -0.63
SGIP1-213ENST00000493564 COL11A1P12107 1806 aaPredicted RBP11.1□□□□□ -0.63
SGIP1-213ENST00000493564 SGPL1O95470 568 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 GOLGA8HP0CJ92 632 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 CCND3P30281 292 aaPredicted RBP11.1□□□□□ -0.63
SGIP1-213ENST00000493564 GJA8P48165 433 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 BMP2KLQ5H9B9 411 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 PRAMEF19Q5SWL8 479 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 CYB5R4Q7L1T6 521 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 CHST3Q7LGC8 479 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 FAM160B2Q86V87 743 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 IQCA1Q86XH1 822 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 DCAF4Q8WV16 495 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 SHISA4Q96DD7 197 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 TTC14Q96N46 770 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 TEX13BQ9BXU2 312 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 LSG1Q9H089 658 aaKnown RBP11.1□□□□□ -0.63
SGIP1-213ENST00000493564 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.1□□□□□ -0.63
SGIP1-213ENST00000493564 CPVLQ9H3G5 476 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 PRR12Q9ULL5 1215 aa11.1□□□□□ -0.63
SGIP1-213ENST00000493564 RBM8AQ9Y5S9 174 aaKnown RBP11.1□□□□□ -0.63
SGIP1-213ENST00000493564 RPTORQ8N122 1335 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 E7EWF7 191 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 PDHBP11177 359 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 CNGA1P29973 690 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 TRDNQ13061 729 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 KCTD2Q14681 263 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 MFSD14CQ5VZR4 134 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 STOX1Q6ZVD7 989 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 DGKHQ86XP1 1220 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 TRMT44Q8IYL2 757 aaKnown RBP11.09□□□□□ -0.63
SGIP1-213ENST00000493564 ENAHQ8N8S7 591 aaPredicted RBP11.09□□□□□ -0.63
SGIP1-213ENST00000493564 UBA5Q9GZZ9 404 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 KAT14Q9H8E8 782 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 CNNM2Q9H8M5 875 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 ANO2Q9NQ90 1003 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 PAK6Q9NQU5 681 aaPredicted RBP11.09□□□□□ -0.63
SGIP1-213ENST00000493564 PPP4R2Q9NY27 417 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 MKI67P46013 3256 aaKnown RBP11.09□□□□□ -0.63
SGIP1-213ENST00000493564 PARP14Q460N5 1801 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 TNRC18O15417 2968 aaPredicted RBP11.09□□□□□ -0.63
SGIP1-213ENST00000493564 TNKSO95271 1327 aa11.09□□□□□ -0.63
SGIP1-213ENST00000493564 HOXC6P09630 235 aa11.08□□□□□ -0.64
SGIP1-213ENST00000493564 ALAS1P13196 640 aa11.08□□□□□ -0.64
SGIP1-213ENST00000493564 MAP3K21Q5TCX8 1036 aa11.08□□□□□ -0.64
SGIP1-213ENST00000493564 ABRAQ8N0Z2 381 aa11.08□□□□□ -0.64
SGIP1-213ENST00000493564 ANKRD35Q8N283 1001 aa11.08□□□□□ -0.64
SGIP1-213ENST00000493564 PNMA1Q8ND90 353 aa11.08□□□□□ -0.64
SGIP1-213ENST00000493564 TRPV1Q8NER1 839 aa11.08□□□□□ -0.64
SGIP1-213ENST00000493564 DDX11Q96FC9 970 aa11.08□□□□□ -0.64
SGIP1-213ENST00000493564 MAML3Q96JK9 1138 aa11.08□□□□□ -0.64
SGIP1-213ENST00000493564 UBAC1Q9BSL1 405 aa11.08□□□□□ -0.64
SGIP1-213ENST00000493564 SENP2Q9HC62 589 aa11.08□□□□□ -0.64
SGIP1-213ENST00000493564 SLC5A4Q9NY91 659 aa11.08□□□□□ -0.64
SGIP1-213ENST00000493564 ZNF536O15090 1300 aa11.08□□□□□ -0.64
SGIP1-213ENST00000493564 IFIT3O14879 490 aaKnown RBP11.07□□□□□ -0.64
SGIP1-213ENST00000493564 ATP2A1O14983 1001 aa11.07□□□□□ -0.64
SGIP1-213ENST00000493564 PLA2G6O60733 806 aa11.07□□□□□ -0.64
SGIP1-213ENST00000493564 ZNF543Q08ER8 600 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms