RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 SMCR8Q8TEV9 937 aaPredicted RBP10.62□□□□□ -0.71
TM4SF1-203ENST00000493298 ZNF274Q96GC6 653 aaPredicted RBP10.62□□□□□ -0.71
TM4SF1-203ENST00000493298 TMEM87BQ96K49 555 aa10.62□□□□□ -0.71
TM4SF1-203ENST00000493298 TMEM47Q9BQJ4 181 aa10.62□□□□□ -0.71
TM4SF1-203ENST00000493298 MTA3Q9BTC8 594 aa10.62□□□□□ -0.71
TM4SF1-203ENST00000493298 RNF41Q9H4P4 317 aaPredicted RBP10.62□□□□□ -0.71
TM4SF1-203ENST00000493298 CNNM2Q9H8M5 875 aa10.62□□□□□ -0.71
TM4SF1-203ENST00000493298 FOXD4L1Q9NU39 408 aa10.62□□□□□ -0.71
TM4SF1-203ENST00000493298 MTMR4Q9NYA4 1195 aa10.62□□□□□ -0.71
TM4SF1-203ENST00000493298 PNMA3Q9UL41 463 aa10.62□□□□□ -0.71
TM4SF1-203ENST00000493298 ADAMTS5Q9UNA0 930 aa10.62□□□□□ -0.71
TM4SF1-203ENST00000493298 TMX2Q9Y320 296 aa10.62□□□□□ -0.71
TM4SF1-203ENST00000493298 KLF18A0A0U1RQI7 1052 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 IFIT3O14879 490 aaKnown RBP10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 JAK2O60674 1132 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 FMNL1O95466 1100 aaPredicted RBP10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 ADD1P35611 737 aaKnown RBP10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 MNX1P50219 401 aaPredicted RBP10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 ERVK-9P63128 1117 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 ERVK-24P63145 666 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 PDE4BQ07343 736 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 TRIM32Q13049 653 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 KIF22Q14807 665 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 ZYXQ15942 572 aaKnown RBP10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 TMEM67Q5HYA8 995 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 MORN1Q5T089 497 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 MAP3K21Q5TCX8 1036 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 CCDC83Q8IWF9 413 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 NSUN7Q8NE18 718 aaKnown RBP10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 SMARCC2Q8TAQ2 1214 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 PXYLP1Q8TE99 480 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 ESR2Q92731 530 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 GTF3C6Q969F1 213 aa10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 PAK6Q9NQU5 681 aaPredicted RBP10.61□□□□□ -0.71
TM4SF1-203ENST00000493298 USP17L15C9J2P7 530 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 USP17L13C9JLJ4 530 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 USP17L11C9JVI0 530 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 USP17L18D6R9N7 530 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 USP17L22D6RA61 530 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 USP17L17D6RBQ6 530 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 USP17L19D6RCP7 530 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 USP17L20D6RJB6 530 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 ADAMTS3O15072 1205 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 ADCY3O60266 1144 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 ST18O60284 1047 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 PPFIA3O75145 1194 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 CCT2P78371 535 aaKnown RBP10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 USP17L24Q0WX57 530 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 STK3Q13188 491 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 PABPC4Q13310 644 aaKnown RBP eCLIP10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 RALYLQ86SE5 291 aaKnown RBP10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 DGKHQ86XP1 1220 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 STAG2Q8N3U4 1231 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 REPS2Q8NFH8 660 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 TRIB2Q92519 343 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 MKL1Q969V6 931 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 UNC93B1Q9H1C4 597 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 RPAP3Q9H6T3 665 aaPredicted RBP10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 TMOD4Q9NZQ9 345 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 RABGAP1Q9Y3P9 1069 aa10.6□□□□□ -0.71
TM4SF1-203ENST00000493298 LRRC37A2A6NM11 1700 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 TNPO2O14787 897 aaKnown RBP10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 CYTH3O43739 400 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 INHAP05111 366 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 SNHG28P0DPA3 235 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 CCL5P13501 91 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 EEF2P13639 858 aaKnown RBP10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 GJA8P48165 433 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 MCM2P49736 904 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 USP14P54578 494 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 IRX3P78415 501 aaPredicted RBP10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 ARHGEF6Q15052 776 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 ZNF654Q8IZM8 581 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 ZNF444Q8N0Y2 327 aaPredicted RBP10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 CMTR1Q8N1G2 835 aaKnown RBP10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 SLAIN1Q8ND83 568 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 IL27Q8NEV9 243 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 DDRGK1Q96HY6 314 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 CCDC17Q96LX7 622 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 TRIM34Q9BYJ4 488 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 CRISPLD2Q9H0B8 497 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 VCPKMTQ9H867 229 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 MKNK2Q9HBH9 465 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 TOMM22Q9NS69 142 aa10.59□□□□□ -0.71
TM4SF1-203ENST00000493298 PALM3A6NDB9 673 aaPredicted RBP10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 TSPY2A6NKD2 308 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 PLEKHA8P1O95397 391 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 MYCP01106 439 aaPredicted RBP10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 GJB1P08034 283 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 HOXD10P28358 340 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 ICA1Q05084 483 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 TRDNQ13061 729 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 WTAPQ15007 396 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 CCL14Q16627 93 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 GPR142Q7Z601 462 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 HSCBQ8IWL3 235 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 CCDC144CPQ8IYA2 1237 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 SRBD1Q8N5C6 995 aaKnown RBP10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 GPRC5AQ8NFJ5 357 aa10.58□□□□□ -0.72
TM4SF1-203ENST00000493298 RAET1EQ8TD07 263 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms