RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 MMP14P50281 582 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 EIF6P56537 245 aaKnown RBP16.04■□□□□ 0.16
PTPN7-216ENST00000492977 ATP2C1P98194 919 aaPredicted RBP16.04■□□□□ 0.16
PTPN7-216ENST00000492977 ZNF543Q08ER8 600 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 ZRSR1Q15695 479 aaKnown RBP16.04■□□□□ 0.16
PTPN7-216ENST00000492977 ZNF174Q15697 407 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 NOM1Q5C9Z4 860 aaKnown RBP16.04■□□□□ 0.16
PTPN7-216ENST00000492977 FKBP1CQ5VVH2 108 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 TMEM179Q6ZVK1 233 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 RASGRP2Q7LDG7 609 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 C6orf50Q9HD87 102 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 CREBZFQ9NS37 354 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 USP25Q9UHP3 1055 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 CCDC194A0A1B0GVG4 234 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 ESYT2A0FGR8 921 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 NAPAP54920 295 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 KRBA2Q6ZNG9 492 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 LUZP1Q86V48 1076 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 UBA5Q9GZZ9 404 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 NAT10Q9H0A0 1025 aaKnown RBP16.04■□□□□ 0.16
PTPN7-216ENST00000492977 TAOK3Q9H2K8 898 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 CPVLQ9H3G5 476 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 ZNF70Q9UC06 446 aaPredicted RBP16.04■□□□□ 0.16
PTPN7-216ENST00000492977 HERC5Q9UII4 1024 aaKnown RBP16.04■□□□□ 0.16
PTPN7-216ENST00000492977 HOOK1Q9UJC3 728 aaKnown RBP16.04■□□□□ 0.16
PTPN7-216ENST00000492977 PCDHA6Q9UN73 950 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 PCDHA8Q9Y5H6 950 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 CD2APQ9Y5K6 639 aa16.04■□□□□ 0.16
PTPN7-216ENST00000492977 BRCA1P38398 1863 aaKnown RBP16.04■□□□□ 0.16
PTPN7-216ENST00000492977 FRMPD2Q68DX3 1309 aaPredicted RBP16.03■□□□□ 0.16
PTPN7-216ENST00000492977 FER1L6Q2WGJ9 1857 aa16.03■□□□□ 0.16
PTPN7-216ENST00000492977 ADCY5O95622 1261 aa16.03■□□□□ 0.16
PTPN7-216ENST00000492977 GRIN1Q05586 938 aa16.03■□□□□ 0.16
PTPN7-216ENST00000492977 PTGDRQ13258 359 aa16.03■□□□□ 0.16
PTPN7-216ENST00000492977 HOMER1Q86YM7 354 aa16.03■□□□□ 0.16
PTPN7-216ENST00000492977 CLEC10AQ8IUN9 316 aa16.03■□□□□ 0.16
PTPN7-216ENST00000492977 FAM43AQ8N2R8 423 aa16.03■□□□□ 0.16
PTPN7-216ENST00000492977 FAM151AQ8WW52 585 aa16.03■□□□□ 0.16
PTPN7-216ENST00000492977 PIGSQ96S52 555 aa16.03■□□□□ 0.16
PTPN7-216ENST00000492977 CSRNP2Q9H175 543 aa16.03■□□□□ 0.16
PTPN7-216ENST00000492977 VAT1LQ9HCJ6 419 aa16.03■□□□□ 0.16
PTPN7-216ENST00000492977 SMCO2A6NFE2 343 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 WNT7AO00755 349 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 ADAMTS3O15072 1205 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 PRR29P0C7W0 189 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 EEF2P13639 858 aaKnown RBP16.02■□□□□ 0.16
PTPN7-216ENST00000492977 ATP2B2Q01814 1243 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 CXCL9Q07325 125 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 ABCB5Q2M3G0 1257 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 LONRF3Q496Y0 759 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 ARL6IP4Q66PJ3 421 aaKnown RBP16.02■□□□□ 0.16
PTPN7-216ENST00000492977 KANK3Q6NY19 840 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 CEP57L1Q8IYX8 460 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 CNNM3Q8NE01 707 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 DCAF4Q8WV16 495 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 JDP2Q8WYK2 163 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 CSRNP1Q96S65 589 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 GPCPD1Q9NPB8 672 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 TUBE1Q9UJT0 475 aa16.02■□□□□ 0.16
PTPN7-216ENST00000492977 PNMA6FA0A0J9YX94 578 aa16.01■□□□□ 0.15
PTPN7-216ENST00000492977 FAM196BA6NMK8 535 aa16.01■□□□□ 0.15
PTPN7-216ENST00000492977 SLURP2P0DP57 97 aa16.01■□□□□ 0.15
PTPN7-216ENST00000492977 TNIP1Q15025 636 aa16.01■□□□□ 0.15
PTPN7-216ENST00000492977 IQCB1Q15051 598 aa16.01■□□□□ 0.15
PTPN7-216ENST00000492977 SPECC1Q5M775 1068 aa16.01■□□□□ 0.15
PTPN7-216ENST00000492977 RBM26Q5T8P6 1007 aaKnown RBP16.01■□□□□ 0.15
PTPN7-216ENST00000492977 CIAPIN1Q6FI81 312 aa16.01■□□□□ 0.15
PTPN7-216ENST00000492977 C11orf57Q6ZUT1 292 aaPredicted RBP16.01■□□□□ 0.15
PTPN7-216ENST00000492977 KRT25Q7Z3Z0 450 aa16.01■□□□□ 0.15
PTPN7-216ENST00000492977 FAM212AQ96EL1 285 aa16.01■□□□□ 0.15
PTPN7-216ENST00000492977 CCDC39Q9UFE4 941 aa16.01■□□□□ 0.15
PTPN7-216ENST00000492977 TCP10L2B9ZVM9 353 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 POLR2DO15514 142 aaKnown RBP16■□□□□ 0.15
PTPN7-216ENST00000492977 MCM7P33993 719 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 NLRP12P59046 1061 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 ICA1Q05084 483 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 SEPT2Q15019 361 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 R3HDM1Q15032 1099 aaKnown RBP16■□□□□ 0.15
PTPN7-216ENST00000492977 CCDC96Q2M329 555 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 PPP1R18Q6NYC8 613 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 ADGRF4Q8IZF3 695 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 ERCC4Q92889 916 aaPredicted RBP16■□□□□ 0.15
PTPN7-216ENST00000492977 CCDC34Q96HJ3 373 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 SGIP1Q9BQI5 828 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 BPIFA3Q9BQP9 254 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 JMJD4Q9H9V9 463 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 SYNPO2Q9UMS6 1093 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 CLRN2A0PK11 232 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 GOLGA6L19H0YKK7 550 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 MYO1BO43795 1136 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 MDM2Q00987 491 aaPredicted RBP16■□□□□ 0.15
PTPN7-216ENST00000492977 FAM83AQ86UY5 434 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 SIAH1Q8IUQ4 282 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 C4orf32Q8N8J7 132 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 GMCL1P1Q8NEA9 526 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 RASGRP4Q8TDF6 673 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 MTMR8Q96EF0 704 aa16■□□□□ 0.15
PTPN7-216ENST00000492977 ZBED3Q96IU2 234 aaPredicted RBP16■□□□□ 0.15
PTPN7-216ENST00000492977 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16■□□□□ 0.15
PTPN7-216ENST00000492977 LTBP3Q9NS15 1303 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms