RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 SYNGAP1Q96PV0 1343 aa8.9□□□□□ -0.98
TPR-208ENST00000492973 PLSCR1O15162 318 aa8.9□□□□□ -0.98
TPR-208ENST00000492973 DYRK3O43781 588 aa8.9□□□□□ -0.98
TPR-208ENST00000492973 CELA3AP09093 270 aa8.9□□□□□ -0.98
TPR-208ENST00000492973 ZNF16P17020 682 aaPredicted RBP8.9□□□□□ -0.98
TPR-208ENST00000492973 BMP6P22004 513 aa8.9□□□□□ -0.98
TPR-208ENST00000492973 ZNF252P-AS1Q0IIN9 211 aa8.9□□□□□ -0.98
TPR-208ENST00000492973 MEI1Q5TIA1 1274 aa8.9□□□□□ -0.98
TPR-208ENST00000492973 SV2BQ7L1I2 683 aa8.9□□□□□ -0.98
TPR-208ENST00000492973 MYRFLQ96LU7 910 aa8.9□□□□□ -0.98
TPR-208ENST00000492973 TOGARAM1Q9Y4F4 1720 aa8.9□□□□□ -0.98
TPR-208ENST00000492973 NHSQ6T4R5 1651 aa8.89□□□□□ -0.99
TPR-208ENST00000492973 ADAMTS7Q9UKP4 1686 aa8.89□□□□□ -0.99
TPR-208ENST00000492973 KCNQ3O43525 872 aa8.89□□□□□ -0.99
TPR-208ENST00000492973 ADH5P11766 374 aa8.89□□□□□ -0.99
TPR-208ENST00000492973 SOX4Q06945 474 aaPredicted RBP8.89□□□□□ -0.99
TPR-208ENST00000492973 LMOD3Q0VAK6 560 aa8.89□□□□□ -0.99
TPR-208ENST00000492973 TEFQ10587 303 aa8.89□□□□□ -0.99
TPR-208ENST00000492973 SLC39A6Q13433 755 aa8.89□□□□□ -0.99
TPR-208ENST00000492973 PDE3AQ14432 1141 aa8.89□□□□□ -0.99
TPR-208ENST00000492973 EZH2Q15910 746 aaKnown RBP8.89□□□□□ -0.99
TPR-208ENST00000492973 PRR23CQ6ZRP0 262 aa8.89□□□□□ -0.99
TPR-208ENST00000492973 C12orf50Q8NA57 414 aaPredicted RBP8.89□□□□□ -0.99
TPR-208ENST00000492973 UTP4Q969X6 686 aaKnown RBP8.89□□□□□ -0.99
TPR-208ENST00000492973 CRELD1Q96HD1 420 aa8.89□□□□□ -0.99
TPR-208ENST00000492973 WDR18Q9BV38 432 aa8.89□□□□□ -0.99
TPR-208ENST00000492973 EMILIN2Q9BXX0 1053 aa8.89□□□□□ -0.99
TPR-208ENST00000492973 CACNA2D2Q9NY47 1150 aa8.89□□□□□ -0.99
TPR-208ENST00000492973 PALLDQ8WX93 1383 aa8.88□□□□□ -0.99
TPR-208ENST00000492973 K7ELQ4 463 aaPredicted RBP8.88□□□□□ -0.99
TPR-208ENST00000492973 SART1O43290 800 aaKnown RBP8.88□□□□□ -0.99
TPR-208ENST00000492973 ZNF862O60290 1169 aa8.88□□□□□ -0.99
TPR-208ENST00000492973 AOC2O75106 756 aa8.88□□□□□ -0.99
TPR-208ENST00000492973 CENPBP07199 599 aaPredicted RBP8.88□□□□□ -0.99
TPR-208ENST00000492973 DRD2P14416 443 aa8.88□□□□□ -0.99
TPR-208ENST00000492973 ST13P50502 369 aaKnown RBP8.88□□□□□ -0.99
TPR-208ENST00000492973 MRPL58Q14197 206 aaKnown RBP8.88□□□□□ -0.99
TPR-208ENST00000492973 TAF7Q15545 349 aaPredicted RBP8.88□□□□□ -0.99
TPR-208ENST00000492973 TXNRD1Q16881 649 aa8.88□□□□□ -0.99
TPR-208ENST00000492973 RASIP1Q5U651 963 aa8.88□□□□□ -0.99
TPR-208ENST00000492973 NGEFQ8N5V2 710 aa8.88□□□□□ -0.99
TPR-208ENST00000492973 C2CD4AQ8NCU7 369 aaPredicted RBP8.88□□□□□ -0.99
TPR-208ENST00000492973 SMARCC1Q92922 1105 aaPredicted RBP8.88□□□□□ -0.99
TPR-208ENST00000492973 WDR89Q96FK6 387 aaPredicted RBP8.88□□□□□ -0.99
TPR-208ENST00000492973 ZC3H12CQ9C0D7 883 aaKnown RBP8.88□□□□□ -0.99
TPR-208ENST00000492973 MIS18AQ9NYP9 233 aa8.88□□□□□ -0.99
TPR-208ENST00000492973 DOT1LQ8TEK3 1739 aa8.88□□□□□ -0.99
TPR-208ENST00000492973 RBM47A0AV96 593 aaKnown RBP8.87□□□□□ -0.99
TPR-208ENST00000492973 DHX15O43143 795 aaKnown RBP8.87□□□□□ -0.99
TPR-208ENST00000492973 ADAM23O75077 832 aa8.87□□□□□ -0.99
TPR-208ENST00000492973 LIG1P18858 919 aa8.87□□□□□ -0.99
TPR-208ENST00000492973 ITGB7P26010 798 aa8.87□□□□□ -0.99
TPR-208ENST00000492973 KIF4BQ2VIQ3 1234 aa8.87□□□□□ -0.99
TPR-208ENST00000492973 FAM20CQ8IXL6 584 aa8.87□□□□□ -0.99
TPR-208ENST00000492973 KCNB2Q92953 911 aa8.87□□□□□ -0.99
TPR-208ENST00000492973 VTI1BQ9UEU0 232 aa8.87□□□□□ -0.99
TPR-208ENST00000492973 HIF3AQ9Y2N7 669 aa8.87□□□□□ -0.99
TPR-208ENST00000492973 SAMM50Q9Y512 469 aa8.87□□□□□ -0.99
TPR-208ENST00000492973 PCDHGC5Q9Y5F6 944 aa8.87□□□□□ -0.99
TPR-208ENST00000492973 TNS1Q9HBL0 1735 aaKnown RBP8.87□□□□□ -0.99
TPR-208ENST00000492973 ZNF521Q96K83 1311 aa8.86□□□□□ -0.99
TPR-208ENST00000492973 BTBD11A6QL63 1104 aa8.86□□□□□ -0.99
TPR-208ENST00000492973 CHL1O00533 1208 aa8.86□□□□□ -0.99
TPR-208ENST00000492973 ZNF853P0CG23 659 aa8.86□□□□□ -0.99
TPR-208ENST00000492973 ITPK1Q13572 414 aa8.86□□□□□ -0.99
TPR-208ENST00000492973 TAF1CQ15572 869 aaPredicted RBP8.86□□□□□ -0.99
TPR-208ENST00000492973 CCDC85BQ15834 202 aaPredicted RBP8.86□□□□□ -0.99
TPR-208ENST00000492973 PCNX4Q63HM2 1172 aa8.86□□□□□ -0.99
TPR-208ENST00000492973 ZNF790Q6PG37 636 aa8.86□□□□□ -0.99
TPR-208ENST00000492973 GRIN3AQ8TCU5 1115 aa8.86□□□□□ -0.99
TPR-208ENST00000492973 SEMA6BQ9H3T3 888 aa8.86□□□□□ -0.99
TPR-208ENST00000492973 GSX1Q9H4S2 264 aaPredicted RBP8.86□□□□□ -0.99
TPR-208ENST00000492973 RAD18Q9NS91 495 aa8.86□□□□□ -0.99
TPR-208ENST00000492973 SBF2Q86WG5 1849 aa8.86□□□□□ -0.99
TPR-208ENST00000492973 GAS2O43903 313 aaKnown RBP8.85□□□□□ -0.99
TPR-208ENST00000492973 BMP3P12645 472 aa8.85□□□□□ -0.99
TPR-208ENST00000492973 MAP1SQ66K74 1059 aaPredicted RBP8.85□□□□□ -0.99
TPR-208ENST00000492973 RGS22Q8NE09 1264 aa8.85□□□□□ -0.99
TPR-208ENST00000492973 ZNF496Q96IT1 587 aaPredicted RBP8.85□□□□□ -0.99
TPR-208ENST00000492973 CBX8Q9HC52 389 aa8.85□□□□□ -0.99
TPR-208ENST00000492973 BABAM1Q9NWV8 329 aa8.85□□□□□ -0.99
TPR-208ENST00000492973 CCNL1Q9UK58 526 aaPredicted RBP8.85□□□□□ -0.99
TPR-208ENST00000492973 PPP1R9AQ9ULJ8 1098 aa8.85□□□□□ -0.99
TPR-208ENST00000492973 RAXQ9Y2V3 346 aa8.85□□□□□ -0.99
TPR-208ENST00000492973 KCPQ6ZWJ8 1503 aa8.85□□□□□ -0.99
TPR-208ENST00000492973 SCN11AQ9UI33 1791 aa8.84□□□□□ -0.99
TPR-208ENST00000492973 EIF4A1P60842 406 aaKnown RBP8.84□□□□□ -0.99
TPR-208ENST00000492973 SGO2Q562F6 1265 aa8.84□□□□□ -0.99
TPR-208ENST00000492973 SCARA3Q6AZY7 606 aa8.84□□□□□ -0.99
TPR-208ENST00000492973 LLGL2Q6P1M3 1020 aa8.84□□□□□ -0.99
TPR-208ENST00000492973 WDR63Q8IWG1 891 aa8.84□□□□□ -0.99
TPR-208ENST00000492973 DNAJC10Q8IXB1 793 aa8.84□□□□□ -0.99
TPR-208ENST00000492973 TTC5Q8N0Z6 440 aa8.84□□□□□ -0.99
TPR-208ENST00000492973 LINC00116Q8NCU8 138 aa8.84□□□□□ -0.99
TPR-208ENST00000492973 GPBAR1Q8TDU6 330 aa8.84□□□□□ -0.99
TPR-208ENST00000492973 NOC4LQ9BVI4 516 aaKnown RBP8.84□□□□□ -0.99
TPR-208ENST00000492973 IFT57Q9NWB7 429 aa8.84□□□□□ -0.99
TPR-208ENST00000492973 TSPYL4Q9UJ04 414 aa8.84□□□□□ -0.99
TPR-208ENST00000492973 CYP8B1Q9UNU6 501 aa8.84□□□□□ -0.99
TPR-208ENST00000492973 ACTL7BQ9Y614 415 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms