RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 CCDC12Q8WUD4 166 aaPredicted RBP9.27□□□□□ -0.93
FDPS-218ENST00000492887 ZKSCAN4Q969J2 545 aaPredicted RBP9.27□□□□□ -0.93
FDPS-218ENST00000492887 NUP88Q99567 741 aaPredicted RBP9.27□□□□□ -0.93
FDPS-218ENST00000492887 SPZ1Q9BXG8 430 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 GJB4Q9NTQ9 266 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 KCNJ14Q9UNX9 436 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 ZDHHC9Q9Y397 364 aa9.27□□□□□ -0.93
FDPS-218ENST00000492887 ZNFX1Q9P2E3 1918 aaKnown RBP9.27□□□□□ -0.93
FDPS-218ENST00000492887 A0A1W2PRG0 241 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 PHF20L1A8MW92 1017 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 USP17L10C9JJH3 530 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 MCM4P33991 863 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 STAT2P52630 851 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 USP14P54578 494 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 MAP3K9P80192 1104 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 RESTQ13127 1097 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 MTMR2Q13614 643 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 PFKFB3Q16875 520 aaPredicted RBP9.26□□□□□ -0.93
FDPS-218ENST00000492887 SYDE2Q5VT97 1194 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 MAP1SQ66K74 1059 aaPredicted RBP9.26□□□□□ -0.93
FDPS-218ENST00000492887 DLK2Q6UY11 383 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 DIS3L2Q8IYB7 885 aaKnown RBP9.26□□□□□ -0.93
FDPS-218ENST00000492887 FBXO18Q8NFZ0 1043 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 MKL1Q969V6 931 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 ZNF396Q96N95 335 aaPredicted RBP9.26□□□□□ -0.93
FDPS-218ENST00000492887 PIGSQ96S52 555 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 TANGO6Q9C0B7 1094 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 VCPKMTQ9H867 229 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 TMOD4Q9NZQ9 345 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 TMX2Q9Y320 296 aa9.26□□□□□ -0.93
FDPS-218ENST00000492887 RLFQ13129 1914 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 KIAA1217Q5T5P2 1943 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 TRIM75PA6NK02 468 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 MMP1P03956 469 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 POTEIP0CG38 1075 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 POTEJP0CG39 1038 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 SNHG28P0DPA3 235 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 CALML3P27482 149 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 KIF23Q02241 960 aaPredicted RBP9.25□□□□□ -0.93
FDPS-218ENST00000492887 MAP3K10Q02779 954 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 CEBPZQ03701 1054 aaKnown RBP9.25□□□□□ -0.93
FDPS-218ENST00000492887 DNM1Q05193 864 aaKnown RBP9.25□□□□□ -0.93
FDPS-218ENST00000492887 SPP2Q13103 211 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 CDC37Q16543 378 aaPredicted RBP9.25□□□□□ -0.93
FDPS-218ENST00000492887 FAM173BQ6P4H8 233 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 LDHDQ86WU2 507 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 ADGRF4Q8IZF3 695 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 KIFC2Q96AC6 838 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 KLRG1Q96E93 195 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 GMCL1Q96IK5 515 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 CHAMP1Q96JM3 812 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 ELP3Q9H9T3 547 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 GDPD2Q9HCC8 539 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 NMRK2Q9NPI5 230 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 SYNPO2Q9UMS6 1093 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 NOL7Q9UMY1 257 aaKnown RBP9.25□□□□□ -0.93
FDPS-218ENST00000492887 CNPY2Q9Y2B0 182 aa9.25□□□□□ -0.93
FDPS-218ENST00000492887 POTECB2RU33 542 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 hCG_1984214I3L0E3 225 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 WDR46O15213 610 aaKnown RBP9.24□□□□□ -0.93
FDPS-218ENST00000492887 CYTH3O43739 400 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 USP2O75604 605 aaPredicted RBP9.24□□□□□ -0.93
FDPS-218ENST00000492887 PTPRAP18433 802 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 ATP2B1P20020 1258 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 SMARCA1P28370 1054 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 SNAP25P60880 206 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 FUT2Q10981 343 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 VGLL4Q14135 290 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 STK38Q15208 465 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 PKN1Q16512 942 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 USH1GQ495M9 461 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 NOL9Q5SY16 702 aaKnown RBP9.24□□□□□ -0.93
FDPS-218ENST00000492887 WWC2Q6AWC2 1192 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 CCDC174Q6PII3 467 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 GADL1Q6ZQY3 521 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 BRAPQ7Z569 592 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 FAM160B2Q86V87 743 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 ANKRD13AQ8IZ07 590 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 ZNF713Q8N859 430 aaPredicted RBP9.24□□□□□ -0.93
FDPS-218ENST00000492887 ZNF280CQ8ND82 737 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.24□□□□□ -0.93
FDPS-218ENST00000492887 CHURC1Q8WUH1 139 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 OTUD5Q96G74 571 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 SPATA32Q96LK8 384 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 C6orf50Q9HD87 102 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 ZNF112Q9UJU3 913 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 FEM1BQ9UK73 627 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 CFAP45Q9UL16 551 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 ZHX2Q9Y6X8 837 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 PLXNB2O15031 1838 aa9.24□□□□□ -0.93
FDPS-218ENST00000492887 PLXNA1Q9UIW2 1896 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 A0A0G2JMZ2 1700 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 CCDC194A0A1B0GVG4 234 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 GOLGA6L4A6NEF3 574 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 KIF28PB7ZC32 967 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 STXBP3O00186 592 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 TRAF5O00463 557 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 PRPF40AO75400 957 aaKnown RBP9.23□□□□□ -0.93
FDPS-218ENST00000492887 FLOT1O75955 427 aa9.23□□□□□ -0.93
FDPS-218ENST00000492887 ADCY7P51828 1080 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms