RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 KIFC2Q96AC6 838 aa4.81□□□□□ -1.64
BRCA1-220ENST00000492859 GMCL1Q96IK5 515 aa4.81□□□□□ -1.64
BRCA1-220ENST00000492859 BARD1Q99728 777 aaKnown RBP4.81□□□□□ -1.64
BRCA1-220ENST00000492859 DESI2Q9BSY9 194 aa4.81□□□□□ -1.64
BRCA1-220ENST00000492859 MKNK1Q9BUB5 465 aa4.81□□□□□ -1.64
BRCA1-220ENST00000492859 DEF6Q9H4E7 631 aa4.81□□□□□ -1.64
BRCA1-220ENST00000492859 VEZTQ9HBM0 779 aa4.81□□□□□ -1.64
BRCA1-220ENST00000492859 PSD3Q9NYI0 1048 aa4.81□□□□□ -1.64
BRCA1-220ENST00000492859 LUC7L2Q9Y383 392 aaKnown RBP4.81□□□□□ -1.64
BRCA1-220ENST00000492859 EPN1Q9Y6I3 576 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-220ENST00000492859 V9GY48 417 aaPredicted RBP4.81□□□□□ -1.64
BRCA1-220ENST00000492859 ATAD2BQ9ULI0 1458 aa4.81□□□□□ -1.64
BRCA1-220ENST00000492859 ITIH6Q6UXX5 1313 aa4.81□□□□□ -1.64
BRCA1-220ENST00000492859 E2F8A0AVK6 867 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 DDX11L8A8MPP1 907 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 F8W031 263 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-220ENST00000492859 ATP5J2-PTCD1G3V325 749 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 CASQ2O14958 399 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-220ENST00000492859 ACTN4O43707 911 aaKnown RBP4.8□□□□□ -1.64
BRCA1-220ENST00000492859 KPNA6O60684 536 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 ABLIM3O94929 683 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 RPS2P15880 293 aaKnown RBP4.8□□□□□ -1.64
BRCA1-220ENST00000492859 CD9P21926 228 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 XPAP23025 273 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-220ENST00000492859 GNA15P30679 374 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 HSPA1LP34931 641 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 SKIV2L2P42285 1042 aaKnown RBP4.8□□□□□ -1.64
BRCA1-220ENST00000492859 CTAG1AP78358 180 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 AKAP17AQ02040 695 aaKnown RBP4.8□□□□□ -1.64
BRCA1-220ENST00000492859 TRDNQ13061 729 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 SETMARQ53H47 684 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-220ENST00000492859 CCDC122Q5T0U0 273 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 HECTD3Q5T447 861 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 TRIM68Q6AZZ1 485 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 FASTKD5Q7L8L6 764 aaKnown RBP4.8□□□□□ -1.64
BRCA1-220ENST00000492859 PASD1Q8IV76 773 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 TPH2Q8IWU9 490 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 AFAP1L2Q8N4X5 818 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 CELF2-AS1Q8N7Q2 184 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 SLC16A10Q8TF71 515 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 RABGGTAQ92696 567 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 DPF3Q92784 378 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 YIPF2Q9BWQ6 316 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 DNAI2Q9GZS0 605 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 OSBPL3Q9H4L5 887 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 ZFYVE28Q9HCC9 887 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 PRDM11Q9NQV5 511 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 STARD7Q9NQZ5 370 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 KLHL11Q9NVR0 708 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 CHMP5Q9NZZ3 219 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 SEPT10Q9P0V9 454 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 NFKBIL1Q9UBC1 381 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-220ENST00000492859 GPR52Q9Y2T5 361 aa4.8□□□□□ -1.64
BRCA1-220ENST00000492859 IRS4O14654 1257 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-220ENST00000492859 GPR182O15218 404 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 PMM2O15305 246 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 FOXD2O60548 495 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-220ENST00000492859 TNFRSF21O75509 655 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 USP2O75604 605 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-220ENST00000492859 SASH1O94885 1247 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 CYP1A2P05177 515 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 PYGLP06737 847 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 IMPDH2P12268 514 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 ATP6V1B1P15313 513 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 ZNF24P17028 368 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 GNAT2P19087 354 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 RPS6KB1P23443 525 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 INPP5BP32019 993 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 MTHFRP42898 656 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 ATP2B2Q01814 1243 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 CYP4A11Q02928 519 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 IFRD2Q12894 506 aaPredicted RBP4.79□□□□□ -1.64
BRCA1-220ENST00000492859 ZBTB17Q13105 803 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 NCOA4Q13772 614 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 TRIM14Q14142 442 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 GRM3Q14832 879 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 ARHGEF6Q15052 776 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 WSCD2Q2TBF2 565 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 SLC45A4Q5BKX6 768 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 FKBP15Q5T1M5 1219 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 C6orf118Q5T5N4 469 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 CRTC1Q6UUV9 634 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 TMCO3Q6UWJ1 677 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 NCAPG2Q86XI2 1143 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 NRSN1Q8IZ57 195 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 LRRC43Q8N309 656 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 KIAA1524Q8TCG1 905 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 TMC1Q8TDI8 760 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 TBC1D22AQ8WUA7 517 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 MTMR8Q96EF0 704 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 MFSD3Q96ES6 412 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 CLMNQ96JQ2 1002 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 C7orf25Q9BPX7 421 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 NUDT16L1Q9BRJ7 211 aaKnown RBP4.79□□□□□ -1.64
BRCA1-220ENST00000492859 CAPS2Q9BXY5 557 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 PNNQ9H307 717 aaKnown RBP4.79□□□□□ -1.64
BRCA1-220ENST00000492859 RRN3Q9NYV6 651 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 FNIP2Q9P278 1114 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 ADAMTS1Q9UHI8 967 aa4.79□□□□□ -1.64
BRCA1-220ENST00000492859 PFDN2Q9UHV9 154 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms