RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 CST5P28325 142 aaPredicted RBP14.62□□□□□ -0.07
GPNMB-214ENST00000492858 STAT3P40763 770 aa14.62□□□□□ -0.07
GPNMB-214ENST00000492858 RABGGTBP53611 331 aa14.62□□□□□ -0.07
GPNMB-214ENST00000492858 OTOP2Q7RTS6 562 aa14.62□□□□□ -0.07
GPNMB-214ENST00000492858 SIAH1Q8IUQ4 282 aa14.62□□□□□ -0.07
GPNMB-214ENST00000492858 PCSK9Q8NBP7 692 aaKnown RBP14.62□□□□□ -0.07
GPNMB-214ENST00000492858 MCM9Q9NXL9 1143 aa14.62□□□□□ -0.07
GPNMB-214ENST00000492858 VWA5AO00534 786 aa14.61□□□□□ -0.07
GPNMB-214ENST00000492858 ERC2O15083 957 aa14.61□□□□□ -0.07
GPNMB-214ENST00000492858 SNAI1O95863 264 aaPredicted RBP14.61□□□□□ -0.07
GPNMB-214ENST00000492858 CT47B1P0C2W7 299 aaPredicted RBP14.61□□□□□ -0.07
GPNMB-214ENST00000492858 MYOGP15173 224 aa14.61□□□□□ -0.07
GPNMB-214ENST00000492858 COPB2P35606 906 aa14.61□□□□□ -0.07
GPNMB-214ENST00000492858 MSL3Q8N5Y2 521 aaKnown RBP14.61□□□□□ -0.07
GPNMB-214ENST00000492858 CCDC8Q9H0W5 538 aaPredicted RBP14.61□□□□□ -0.07
GPNMB-214ENST00000492858 ANTXR1Q9H6X2 564 aa14.61□□□□□ -0.07
GPNMB-214ENST00000492858 SPC25Q9HBM1 224 aa14.61□□□□□ -0.07
GPNMB-214ENST00000492858 ZNF214Q9UL59 606 aaPredicted RBP14.61□□□□□ -0.07
GPNMB-214ENST00000492858 ADAMTS5Q9UNA0 930 aa14.61□□□□□ -0.07
GPNMB-214ENST00000492858 MAGEB6P1A0A0J9YX57 407 aa14.6□□□□□ -0.07
GPNMB-214ENST00000492858 ADCY6O43306 1168 aa14.6□□□□□ -0.07
GPNMB-214ENST00000492858 CYP2D6P10635 497 aa14.6□□□□□ -0.07
GPNMB-214ENST00000492858 AKR1B1P15121 316 aa14.6□□□□□ -0.07
GPNMB-214ENST00000492858 GNASQ5JWF2 1037 aa14.6□□□□□ -0.07
GPNMB-214ENST00000492858 ARHGAP45Q92619 1136 aa14.6□□□□□ -0.07
GPNMB-214ENST00000492858 DYNLL2Q96FJ2 89 aa14.6□□□□□ -0.07
GPNMB-214ENST00000492858 CRNKL1Q9BZJ0 848 aaKnown RBP14.6□□□□□ -0.07
GPNMB-214ENST00000492858 HIPK3Q9H422 1215 aa14.6□□□□□ -0.07
GPNMB-214ENST00000492858 ZNFX1Q9P2E3 1918 aaKnown RBP14.59□□□□□ -0.07
GPNMB-214ENST00000492858 CD4P01730 458 aa14.59□□□□□ -0.07
GPNMB-214ENST00000492858 ACVR2BQ13705 512 aa14.59□□□□□ -0.07
GPNMB-214ENST00000492858 POLA2Q14181 598 aa14.59□□□□□ -0.07
GPNMB-214ENST00000492858 TMED8Q6PL24 325 aaPredicted RBP14.59□□□□□ -0.07
GPNMB-214ENST00000492858 MAMDC4Q6UXC1 1216 aa14.59□□□□□ -0.07
GPNMB-214ENST00000492858 REPS2Q8NFH8 660 aa14.59□□□□□ -0.07
GPNMB-214ENST00000492858 SDR42E1Q8WUS8 393 aa14.59□□□□□ -0.07
GPNMB-214ENST00000492858 DDX11Q96FC9 970 aa14.59□□□□□ -0.07
GPNMB-214ENST00000492858 UPF3AQ9H1J1 476 aaKnown RBP14.59□□□□□ -0.07
GPNMB-214ENST00000492858 SWAP70Q9UH65 585 aa14.59□□□□□ -0.07
GPNMB-214ENST00000492858 PPP1R9AQ9ULJ8 1098 aa14.59□□□□□ -0.07
GPNMB-214ENST00000492858 SLC4A7Q9Y6M7 1214 aa14.59□□□□□ -0.07
GPNMB-214ENST00000492858 UMODL1Q5DID0 1318 aa14.59□□□□□ -0.07
GPNMB-214ENST00000492858 FAM86C2PA6NEL3 165 aa14.58□□□□□ -0.08
GPNMB-214ENST00000492858 RFXAPO00287 272 aa14.58□□□□□ -0.08
GPNMB-214ENST00000492858 GTPBP6O43824 516 aaPredicted RBP14.58□□□□□ -0.08
GPNMB-214ENST00000492858 SURF6O75683 361 aaKnown RBP14.58□□□□□ -0.08
GPNMB-214ENST00000492858 RARSP54136 660 aaKnown RBP14.58□□□□□ -0.08
GPNMB-214ENST00000492858 CCL23P55773 120 aa14.58□□□□□ -0.08
GPNMB-214ENST00000492858 GJA9P57773 515 aa14.58□□□□□ -0.08
GPNMB-214ENST00000492858 CCDC144BQ3MJ40 725 aa14.58□□□□□ -0.08
GPNMB-214ENST00000492858 TRMT2AQ8IZ69 625 aaKnown RBP14.58□□□□□ -0.08
GPNMB-214ENST00000492858 DCP1AQ9NPI6 582 aaPredicted RBP14.58□□□□□ -0.08
GPNMB-214ENST00000492858 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.58□□□□□ -0.08
GPNMB-214ENST00000492858 PCDHA11Q9Y5I1 949 aa14.58□□□□□ -0.08
GPNMB-214ENST00000492858 MTCH2Q9Y6C9 303 aa14.58□□□□□ -0.08
GPNMB-214ENST00000492858 NAV1Q8NEY1 1877 aa14.57□□□□□ -0.08
GPNMB-214ENST00000492858 DNAJC25-GNG10A0A024R161 153 aa14.57□□□□□ -0.08
GPNMB-214ENST00000492858 ZBBXA8MT70 800 aa14.57□□□□□ -0.08
GPNMB-214ENST00000492858 RAD21O60216 631 aa14.57□□□□□ -0.08
GPNMB-214ENST00000492858 GPR37L1O60883 481 aa14.57□□□□□ -0.08
GPNMB-214ENST00000492858 ALYREFQ86V81 257 aaKnown RBP14.57□□□□□ -0.08
GPNMB-214ENST00000492858 KHSRPQ92945 711 aaKnown RBP eCLIP14.57□□□□□ -0.08
GPNMB-214ENST00000492858 EAF2Q96CJ1 260 aaPredicted RBP14.57□□□□□ -0.08
GPNMB-214ENST00000492858 TEX13BQ9BXU2 312 aa14.57□□□□□ -0.08
GPNMB-214ENST00000492858 C11orf16Q9NQ32 467 aa14.57□□□□□ -0.08
GPNMB-214ENST00000492858 COG5Q9UP83 839 aa14.57□□□□□ -0.08
GPNMB-214ENST00000492858 TNNQ9UQP3 1299 aa14.57□□□□□ -0.08
GPNMB-214ENST00000492858 MUC6Q6W4X9 2439 aa14.57□□□□□ -0.08
GPNMB-214ENST00000492858 CTAGE5O15320 804 aa14.56□□□□□ -0.08
GPNMB-214ENST00000492858 TLL1O43897 1013 aa14.56□□□□□ -0.08
GPNMB-214ENST00000492858 BCAR3O75815 825 aa14.56□□□□□ -0.08
GPNMB-214ENST00000492858 EEF2P13639 858 aaKnown RBP14.56□□□□□ -0.08
GPNMB-214ENST00000492858 TRIM27P14373 513 aa14.56□□□□□ -0.08
GPNMB-214ENST00000492858 PDE6AP16499 860 aa14.56□□□□□ -0.08
GPNMB-214ENST00000492858 ATP2A2P16615 1042 aaKnown RBP14.56□□□□□ -0.08
GPNMB-214ENST00000492858 SLC4A3P48751 1232 aa14.56□□□□□ -0.08
GPNMB-214ENST00000492858 BEX3Q00994 111 aa14.56□□□□□ -0.08
GPNMB-214ENST00000492858 FAM83BQ5T0W9 1011 aa14.56□□□□□ -0.08
GPNMB-214ENST00000492858 SNRNP48Q6IEG0 339 aaKnown RBP14.56□□□□□ -0.08
GPNMB-214ENST00000492858 ZNF467Q7Z7K2 595 aaPredicted RBP14.56□□□□□ -0.08
GPNMB-214ENST00000492858 SSH3Q8TE77 659 aa14.56□□□□□ -0.08
GPNMB-214ENST00000492858 ABHD16BQ9H3Z7 469 aa14.56□□□□□ -0.08
GPNMB-214ENST00000492858 CERS4Q9HA82 394 aa14.56□□□□□ -0.08
GPNMB-214ENST00000492858 GOPCQ9HD26 462 aa14.56□□□□□ -0.08
GPNMB-214ENST00000492858 RIPK3Q9Y572 518 aa14.56□□□□□ -0.08
GPNMB-214ENST00000492858 COL11A1P12107 1806 aaPredicted RBP14.56□□□□□ -0.08
GPNMB-214ENST00000492858 GBF1Q92538 1859 aa14.56□□□□□ -0.08
GPNMB-214ENST00000492858 WDFY4Q6ZS81 3184 aa14.55□□□□□ -0.08
GPNMB-214ENST00000492858 PARP14Q460N5 1801 aa14.55□□□□□ -0.08
GPNMB-214ENST00000492858 POU3F3P20264 500 aaPredicted RBP14.55□□□□□ -0.08
GPNMB-214ENST00000492858 TMEM67Q5HYA8 995 aa14.55□□□□□ -0.08
GPNMB-214ENST00000492858 SLC9C2Q5TAH2 1124 aa14.55□□□□□ -0.08
GPNMB-214ENST00000492858 KRT40Q6A162 431 aa14.55□□□□□ -0.08
GPNMB-214ENST00000492858 CXCL17Q6UXB2 119 aa14.55□□□□□ -0.08
GPNMB-214ENST00000492858 RPUSD2Q8IZ73 545 aaKnown RBP14.55□□□□□ -0.08
GPNMB-214ENST00000492858 SLC43A3Q8NBI5 491 aa14.55□□□□□ -0.08
GPNMB-214ENST00000492858 CCDC17Q96LX7 622 aa14.55□□□□□ -0.08
GPNMB-214ENST00000492858 NOC4LQ9BVI4 516 aaKnown RBP14.55□□□□□ -0.08
GPNMB-214ENST00000492858 WNT8AQ9H1J5 351 aa14.55□□□□□ -0.08
GPNMB-214ENST00000492858 PRRC2BQ5JSZ5 2229 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms