RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 GRB14Q14449 540 aa12.53□□□□□ -0.4
CDC42SE1-206ENST00000492796 RIOX2Q8IUF8 465 aa12.53□□□□□ -0.4
CDC42SE1-206ENST00000492796 NKX2-3Q8TAU0 364 aa12.53□□□□□ -0.4
CDC42SE1-206ENST00000492796 CHURC1Q8WUH1 139 aa12.53□□□□□ -0.4
CDC42SE1-206ENST00000492796 KIFC2Q96AC6 838 aa12.53□□□□□ -0.4
CDC42SE1-206ENST00000492796 ZSCAN10Q96SZ4 725 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE1-206ENST00000492796 UBAC1Q9BSL1 405 aa12.53□□□□□ -0.4
CDC42SE1-206ENST00000492796 TMEM106CQ9BVX2 250 aa12.53□□□□□ -0.4
CDC42SE1-206ENST00000492796 TEX13BQ9BXU2 312 aa12.53□□□□□ -0.4
CDC42SE1-206ENST00000492796 BIN2Q9UBW5 565 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE1-206ENST00000492796 ISY1Q9ULR0 285 aaKnown RBP12.53□□□□□ -0.4
CDC42SE1-206ENST00000492796 CTDP1Q9Y5B0 961 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE1-206ENST00000492796 RBM8AQ9Y5S9 174 aaKnown RBP12.53□□□□□ -0.4
CDC42SE1-206ENST00000492796 INHAP05111 366 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 HOXC6P09630 235 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 ELNP15502 786 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 CYP2B6P20813 491 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 IKQ13123 557 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 CCDC96Q2M329 555 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 KCTD1Q719H9 257 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 RALYLQ86SE5 291 aaKnown RBP12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 NCAPG2Q86XI2 1143 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 ABRAQ8N0Z2 381 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 NCOA7Q8NI08 942 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 ANKS1AQ92625 1134 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 ZKSCAN3Q9BRR0 538 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 SLC38A10Q9HBR0 1119 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 ANO2Q9NQ90 1003 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 RNF216Q9NWF9 866 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 ZSWIM5Q9P217 1185 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 TNKSO95271 1327 aa12.52□□□□□ -0.41
CDC42SE1-206ENST00000492796 E7EWF7 191 aa12.51□□□□□ -0.41
CDC42SE1-206ENST00000492796 SNHG28P0DPA3 235 aa12.51□□□□□ -0.41
CDC42SE1-206ENST00000492796 PDHBP11177 359 aa12.51□□□□□ -0.41
CDC42SE1-206ENST00000492796 ZKSCAN1P17029 563 aaPredicted RBP12.51□□□□□ -0.41
CDC42SE1-206ENST00000492796 SNRNP48Q6IEG0 339 aaKnown RBP12.51□□□□□ -0.41
CDC42SE1-206ENST00000492796 ENAHQ8N8S7 591 aaPredicted RBP12.51□□□□□ -0.41
CDC42SE1-206ENST00000492796 TRIB2Q92519 343 aa12.51□□□□□ -0.41
CDC42SE1-206ENST00000492796 KAT14Q9H8E8 782 aa12.51□□□□□ -0.41
CDC42SE1-206ENST00000492796 SLC5A4Q9NY91 659 aa12.51□□□□□ -0.41
CDC42SE1-206ENST00000492796 FCER1AP12319 257 aa12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 CCL5P13501 91 aa12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 CAPN2P17655 700 aa12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 ADORA2AP29274 412 aa12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 KCTD2Q14681 263 aa12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 SART3Q15020 963 aaKnown RBP12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 MTFR1Q15390 333 aa12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 GPATCH4Q5T3I0 446 aaKnown RBP12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 IFIT1BQ5T764 474 aaKnown RBP12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 BTNL9Q6UXG8 535 aa12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 RASGRP2Q7LDG7 609 aa12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 PNMA1Q8ND90 353 aa12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 FBXO40Q9UH90 709 aa12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 MTMR7Q9Y216 660 aa12.5□□□□□ -0.41
CDC42SE1-206ENST00000492796 PLXNA1Q9UIW2 1896 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 FRMPD2Q68DX3 1309 aaPredicted RBP12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 ERICH2A1L162 156 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 POTEFA5A3E0 1075 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 GJB1P08034 283 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 ZNF543Q08ER8 600 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 NECTIN1Q15223 517 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 RNF20Q5VTR2 975 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 CREB3L3Q68CJ9 461 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 STOX1Q6ZVD7 989 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 CYB5R4Q7L1T6 521 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 DPP9Q86TI2 863 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 CPXCR1Q8N123 301 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 CHST13Q8NET6 341 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 MMP19Q99542 508 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 MTA3Q9BTC8 594 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 RNF208Q9H0X6 261 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 PAK6Q9NQU5 681 aaPredicted RBP12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 PRR12Q9ULL5 1215 aa12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 ZNFX1Q9P2E3 1918 aaKnown RBP12.49□□□□□ -0.41
CDC42SE1-206ENST00000492796 ZNF536O15090 1300 aa12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 RPTORQ8N122 1335 aa12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 SLC27A2O14975 620 aa12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 MYCP01106 439 aaPredicted RBP12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 SEC23AQ15436 765 aa12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 TKFCQ3LXA3 575 aa12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 ASPRV1Q53RT3 343 aa12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 MAP3K21Q5TCX8 1036 aa12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 SYDE2Q5VT97 1194 aa12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 OLFML2BQ68BL8 750 aa12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 MB21D2Q8IYB1 491 aaPredicted RBP12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 CHMP4CQ96CF2 233 aa12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 UNC93B1Q9H1C4 597 aa12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 RANBP17Q9H2T7 1088 aaKnown RBP12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 RAVER2Q9HCJ3 691 aaKnown RBP12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 HMX1Q9NP08 348 aaPredicted RBP12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 PNMA2Q9UL42 364 aa12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 TAF6LQ9Y6J9 622 aa12.48□□□□□ -0.41
CDC42SE1-206ENST00000492796 IFIT3O14879 490 aaKnown RBP12.47□□□□□ -0.41
CDC42SE1-206ENST00000492796 ICAM1P05362 532 aa12.47□□□□□ -0.41
CDC42SE1-206ENST00000492796 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
CDC42SE1-206ENST00000492796 GJA8P48165 433 aa12.47□□□□□ -0.41
CDC42SE1-206ENST00000492796 WTAPQ15007 396 aa12.47□□□□□ -0.41
CDC42SE1-206ENST00000492796 CCL14Q16627 93 aa12.47□□□□□ -0.41
CDC42SE1-206ENST00000492796 MFSD14CQ5VZR4 134 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms