RNA–Protein interactions for RNA: ENST00000492058.1

NCKAP1-206, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 642 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-206ENST00000492058 PDS5AQ29RF7 1337 aaKnown RBP11.25□□□□□ -0.61
NCKAP1-206ENST00000492058 GDF9O60383 454 aa11.24□□□□□ -0.61
NCKAP1-206ENST00000492058 CLTBP09497 229 aa11.24□□□□□ -0.61
NCKAP1-206ENST00000492058 HOXC6P09630 235 aa11.24□□□□□ -0.61
NCKAP1-206ENST00000492058 IGFBP4P22692 258 aa11.24□□□□□ -0.61
NCKAP1-206ENST00000492058 ADORA2AP29274 412 aa11.24□□□□□ -0.61
NCKAP1-206ENST00000492058 MLLT3P42568 568 aaPredicted RBP11.24□□□□□ -0.61
NCKAP1-206ENST00000492058 FPGSQ05932 587 aa11.24□□□□□ -0.61
NCKAP1-206ENST00000492058 GRB14Q14449 540 aa11.24□□□□□ -0.61
NCKAP1-206ENST00000492058 LRRC41Q15345 812 aa11.24□□□□□ -0.61
NCKAP1-206ENST00000492058 NAA16Q6N069 864 aaPredicted RBP11.24□□□□□ -0.61
NCKAP1-206ENST00000492058 CATSPERGQ6ZRH7 1159 aa11.24□□□□□ -0.61
NCKAP1-206ENST00000492058 ATXN2LQ8WWM7 1075 aaKnown RBP11.24□□□□□ -0.61
NCKAP1-206ENST00000492058 COPRSQ9NQ92 184 aa11.24□□□□□ -0.61
NCKAP1-206ENST00000492058 GRXCR1A8MXD5 290 aa11.23□□□□□ -0.61
NCKAP1-206ENST00000492058 SEPT4O43236 478 aa11.23□□□□□ -0.61
NCKAP1-206ENST00000492058 HLA-DOAP06340 250 aa11.23□□□□□ -0.61
NCKAP1-206ENST00000492058 MRPS5P82675 430 aaKnown RBP11.23□□□□□ -0.61
NCKAP1-206ENST00000492058 PLS1Q14651 629 aa11.23□□□□□ -0.61
NCKAP1-206ENST00000492058 FAM47AQ5JRC9 791 aa11.23□□□□□ -0.61
NCKAP1-206ENST00000492058 FAM9BQ8IZU0 186 aa11.23□□□□□ -0.61
NCKAP1-206ENST00000492058 ACER1Q8TDN7 264 aa11.23□□□□□ -0.61
NCKAP1-206ENST00000492058 RPAP3Q9H6T3 665 aaPredicted RBP11.23□□□□□ -0.61
NCKAP1-206ENST00000492058 GINM1Q9NU53 330 aa11.23□□□□□ -0.61
NCKAP1-206ENST00000492058 THEGQ9P2T0 379 aa11.23□□□□□ -0.61
NCKAP1-206ENST00000492058 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.23□□□□□ -0.61
NCKAP1-206ENST00000492058 FLT1P17948 1338 aa11.23□□□□□ -0.61
NCKAP1-206ENST00000492058 MUC3AQ02505 3323 aa11.22□□□□□ -0.61
NCKAP1-206ENST00000492058 COBLO75128 1261 aa11.22□□□□□ -0.61
NCKAP1-206ENST00000492058 PGK1P00558 417 aa11.22□□□□□ -0.61
NCKAP1-206ENST00000492058 VCAM1P19320 739 aa11.22□□□□□ -0.61
NCKAP1-206ENST00000492058 USP14P54578 494 aa11.22□□□□□ -0.61
NCKAP1-206ENST00000492058 DYNLL1P63167 89 aaKnown RBP11.22□□□□□ -0.61
NCKAP1-206ENST00000492058 SNX17Q15036 470 aa11.22□□□□□ -0.61
NCKAP1-206ENST00000492058 OLFML2BQ68BL8 750 aa11.22□□□□□ -0.61
NCKAP1-206ENST00000492058 MAST2Q6P0Q8 1798 aa11.22□□□□□ -0.61
NCKAP1-206ENST00000492058 ATF7IPQ6VMQ6 1270 aa11.22□□□□□ -0.61
NCKAP1-206ENST00000492058 NECAB3Q96P71 396 aaPredicted RBP11.22□□□□□ -0.61
NCKAP1-206ENST00000492058 ATAD5Q96QE3 1844 aa11.22□□□□□ -0.61
NCKAP1-206ENST00000492058 MOV10L1Q9BXT6 1211 aaKnown RBP11.22□□□□□ -0.61
NCKAP1-206ENST00000492058 XPNPEP3Q9NQH7 507 aa11.22□□□□□ -0.61
NCKAP1-206ENST00000492058 SRGAP3O43295 1099 aa11.21□□□□□ -0.61
NCKAP1-206ENST00000492058 STRNO43815 780 aa11.21□□□□□ -0.61
NCKAP1-206ENST00000492058 ERCC3P19447 782 aa11.21□□□□□ -0.61
NCKAP1-206ENST00000492058 MCAMP43121 646 aa11.21□□□□□ -0.61
NCKAP1-206ENST00000492058 ABCB5Q2M3G0 1257 aa11.21□□□□□ -0.61
NCKAP1-206ENST00000492058 ADGRA1Q86SQ6 560 aa11.21□□□□□ -0.61
NCKAP1-206ENST00000492058 NCAPG2Q86XI2 1143 aa11.21□□□□□ -0.61
NCKAP1-206ENST00000492058 TANGO6Q9C0B7 1094 aa11.21□□□□□ -0.61
NCKAP1-206ENST00000492058 SMC4Q9NTJ3 1288 aa11.21□□□□□ -0.61
NCKAP1-206ENST00000492058 SLC5A4Q9NY91 659 aa11.21□□□□□ -0.61
NCKAP1-206ENST00000492058 HDAC5Q9UQL6 1122 aa11.21□□□□□ -0.61
NCKAP1-206ENST00000492058 LTBP2Q14767 1821 aa11.21□□□□□ -0.62
NCKAP1-206ENST00000492058 DCDC2CA8MYV0 355 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 KIAA0355O15063 1070 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 UQCRFS1P1P0C7P4 283 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 RARBP10826 455 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 USP5P45974 858 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 COG2Q14746 738 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 CERKLQ49MI3 558 aaPredicted RBP11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 RNF180Q86T96 592 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 METTL16Q86W50 562 aaKnown RBP11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 MICALL1Q8N3F8 863 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 SLC44A5Q8NCS7 719 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 C12orf42Q96LP6 360 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.2□□□□□ -0.625e-7■■□□□ 12.4
NCKAP1-206ENST00000492058 KIAA1683Q9H0B3 1180 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 CABP5Q9NP86 173 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 HOXC10Q9NYD6 342 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 PHF24Q9UPV7 400 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 NCOR1O75376 2440 aa11.2□□□□□ -0.62
NCKAP1-206ENST00000492058 A0A1W2PQ45 241 aaPredicted RBP11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 A0A1W2PQY0 241 aa11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 MPHOSPH10O00566 681 aaKnown RBP11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 IGHA2P01877 340 aa11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 ACRP10323 421 aa11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 ARID4AP29374 1257 aaPredicted RBP11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 FAAP100Q0VG06 881 aa11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 TTC39AQ5SRH9 613 aa11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 AKNAD1Q5T1N1 836 aa11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 C1orf53Q5VUE5 145 aa11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 SCUBE3Q8IX30 993 aa11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 VTI1AQ96AJ9 217 aa11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 MEIS3Q99687 375 aa11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 PBX4Q9BYU1 374 aa11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 SPATC1LQ9H0A9 340 aa11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 NOB1Q9ULX3 412 aaKnown RBP11.19□□□□□ -0.62
NCKAP1-206ENST00000492058 APBB1O00213 710 aa11.18□□□□□ -0.62
NCKAP1-206ENST00000492058 OATP04181 439 aa11.18□□□□□ -0.62
NCKAP1-206ENST00000492058 PGK2P07205 417 aa11.18□□□□□ -0.62
NCKAP1-206ENST00000492058 TAL1P17542 331 aaPredicted RBP11.18□□□□□ -0.62
NCKAP1-206ENST00000492058 CYP7A1P22680 504 aa11.18□□□□□ -0.62
NCKAP1-206ENST00000492058 FOXC1Q12948 553 aa11.18□□□□□ -0.62
NCKAP1-206ENST00000492058 G3BP1Q13283 466 aaKnown RBP eCLIP11.18□□□□□ -0.62
NCKAP1-206ENST00000492058 ADGRE1Q14246 886 aa11.18□□□□□ -0.62
NCKAP1-206ENST00000492058 SKIV2LQ15477 1246 aaKnown RBP11.18□□□□□ -0.62
NCKAP1-206ENST00000492058 TATDN1Q6P1N9 297 aa11.18□□□□□ -0.62
NCKAP1-206ENST00000492058 LBX2Q6XYB7 198 aa11.18□□□□□ -0.62
NCKAP1-206ENST00000492058 MIGA1Q8NAN2 632 aa11.18□□□□□ -0.62
NCKAP1-206ENST00000492058 LENG1Q96BZ8 264 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms