RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TSHZ3Q63HK5 1081 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.4□□□□□ -0.74
NUP50-217ENST00000491860 ZNF467Q7Z7K2 595 aaPredicted RBP10.4□□□□□ -0.74
NUP50-217ENST00000491860 FAM160B2Q86V87 743 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 NEDD1Q8NHV4 660 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 CHURC1Q8WUH1 139 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 GUCD1Q96NT3 240 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 LBHD1Q9BQE6 289 aaPredicted RBP10.4□□□□□ -0.74
NUP50-217ENST00000491860 TINF2Q9BSI4 451 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.74
NUP50-217ENST00000491860 EPB41L4AQ9HCS5 686 aaPredicted RBP10.4□□□□□ -0.74
NUP50-217ENST00000491860 HELLSQ9NRZ9 838 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 ZNF214Q9UL59 606 aaPredicted RBP10.4□□□□□ -0.74
NUP50-217ENST00000491860 CNPY2Q9Y2B0 182 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 DNAH12Q6ZR08 3092 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 SYNGAP1Q96PV0 1343 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 SPTBN5Q9NRC6 3674 aaKnown RBP10.39□□□□□ -0.75
NUP50-217ENST00000491860 AKR1A1P14550 325 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 MFAP1P55081 439 aaKnown RBP10.39□□□□□ -0.75
NUP50-217ENST00000491860 PPARAQ07869 468 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 LRRC26Q2I0M4 334 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 ZNF792Q3KQV3 632 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 ANKRD45Q5TZF3 282 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 C1orf53Q5VUE5 145 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 SNRNP48Q6IEG0 339 aaKnown RBP10.39□□□□□ -0.75
NUP50-217ENST00000491860 RNF180Q86T96 592 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 TRPV1Q8NER1 839 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 CHST13Q8NET6 341 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 REPS2Q8NFH8 660 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 DDX11Q96FC9 970 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 FBXO28Q9NVF7 368 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 VCANP13611 3396 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 EYSQ5T1H1 3165 aa10.39□□□□□ -0.75
NUP50-217ENST00000491860 SMIM22K7EJ46 135 aa10.38□□□□□ -0.75
NUP50-217ENST00000491860 PLA2G6O60733 806 aa10.38□□□□□ -0.75
NUP50-217ENST00000491860 PCP11498 1178 aaKnown RBP10.38□□□□□ -0.75
NUP50-217ENST00000491860 BMP3P12645 472 aa10.38□□□□□ -0.75
NUP50-217ENST00000491860 STAT2P52630 851 aa10.38□□□□□ -0.75
NUP50-217ENST00000491860 TFAP4Q01664 338 aa10.38□□□□□ -0.75
NUP50-217ENST00000491860 TKFCQ3LXA3 575 aa10.38□□□□□ -0.75
NUP50-217ENST00000491860 CEP95Q96GE4 821 aa10.38□□□□□ -0.75
NUP50-217ENST00000491860 GMCL1Q96IK5 515 aa10.38□□□□□ -0.75
NUP50-217ENST00000491860 RWDD1Q9H446 243 aaPredicted RBP10.38□□□□□ -0.75
NUP50-217ENST00000491860 SLC38A10Q9HBR0 1119 aa10.38□□□□□ -0.75
NUP50-217ENST00000491860 ANAPC4Q9UJX5 808 aa10.38□□□□□ -0.75
NUP50-217ENST00000491860 ZMYM6O95789 1325 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 SALL3Q9BXA9 1300 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 SMCHD1A6NHR9 2005 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 TSPY2A6NKD2 308 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 PRDM1O75626 825 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 RTP1P59025 263 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 LRRC41Q15345 812 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 ALX1Q15699 326 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 GJC2Q5T442 439 aaPredicted RBP10.37□□□□□ -0.75
NUP50-217ENST00000491860 SLFN13Q68D06 897 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 RCSD1Q6JBY9 416 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 MAMDC4Q6UXC1 1216 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 SLC39A5Q6ZMH5 540 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 STK11IPQ8N1F8 1099 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 ANKRD35Q8N283 1001 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 KIFC2Q96AC6 838 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 TSEN34Q9BSV6 310 aaKnown RBP10.37□□□□□ -0.75
NUP50-217ENST00000491860 XPNPEP3Q9NQH7 507 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 PNMA2Q9UL42 364 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 LTBP2Q14767 1821 aa10.37□□□□□ -0.75
NUP50-217ENST00000491860 DNAJC25-GNG10A0A024R161 153 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 MOXD2PA6NHM9 499 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 ORC4O43929 436 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 PGK2P07205 417 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 SLC1A4P43007 532 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 PDE1AP54750 535 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 IKQ13123 557 aaPredicted RBP10.36□□□□□ -0.75
NUP50-217ENST00000491860 SNX17Q15036 470 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 MCMDC2Q4G0Z9 681 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 CPXCR1Q8N123 301 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 NUP133Q8WUM0 1156 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 STAG1Q8WVM7 1258 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 CRBNQ96SW2 442 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 SEC62Q99442 399 aaKnown RBP10.36□□□□□ -0.75
NUP50-217ENST00000491860 NUP88Q99567 741 aaPredicted RBP10.36□□□□□ -0.75
NUP50-217ENST00000491860 ABHD16BQ9H3Z7 469 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 ACAD9Q9H845 621 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 SPC25Q9HBM1 224 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 FAM184BQ9ULE4 1060 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 ISY1Q9ULR0 285 aaKnown RBP10.36□□□□□ -0.75
NUP50-217ENST00000491860 PHF24Q9UPV7 400 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 PRUNE2Q8WUY3 3088 aa10.36□□□□□ -0.75
NUP50-217ENST00000491860 MROH7Q68CQ1 1323 aa10.35□□□□□ -0.75
NUP50-217ENST00000491860 TMEM232C9JQI7 657 aa10.35□□□□□ -0.75
NUP50-217ENST00000491860 RANBP6O60518 1105 aaKnown RBP10.35□□□□□ -0.75
NUP50-217ENST00000491860 MYCNP04198 464 aaPredicted RBP10.35□□□□□ -0.75
NUP50-217ENST00000491860 ZNF865P0CJ78 1059 aaPredicted RBP10.35□□□□□ -0.75
NUP50-217ENST00000491860 ATN1P54259 1190 aaPredicted RBP10.35□□□□□ -0.75
NUP50-217ENST00000491860 MDM2Q00987 491 aaPredicted RBP10.35□□□□□ -0.75
NUP50-217ENST00000491860 PRAMEF19Q5SWL8 479 aa10.35□□□□□ -0.75
NUP50-217ENST00000491860 ZNF697Q5TEC3 545 aa10.35□□□□□ -0.75
NUP50-217ENST00000491860 PCSK9Q8NBP7 692 aaKnown RBP10.35□□□□□ -0.75
NUP50-217ENST00000491860 OTUD7AQ8TE49 926 aaPredicted RBP10.35□□□□□ -0.75
NUP50-217ENST00000491860 DCAF4Q8WV16 495 aa10.35□□□□□ -0.75
NUP50-217ENST00000491860 PRDM6Q9NQX0 595 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms