RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 STAT3P40763 770 aa10.63□□□□□ -0.71
HDAC3-211ENST00000491581 ADCYAP1R1P41586 468 aa10.63□□□□□ -0.71
HDAC3-211ENST00000491581 PDE1AP54750 535 aa10.63□□□□□ -0.71
HDAC3-211ENST00000491581 TFAP4Q01664 338 aa10.63□□□□□ -0.71
HDAC3-211ENST00000491581 TMEM63BQ5T3F8 832 aa10.63□□□□□ -0.71
HDAC3-211ENST00000491581 SNRNP48Q6IEG0 339 aaKnown RBP10.63□□□□□ -0.71
HDAC3-211ENST00000491581 SH3RF1Q7Z6J0 888 aa10.63□□□□□ -0.71
HDAC3-211ENST00000491581 ZNF589Q86UQ0 364 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-211ENST00000491581 RIOX2Q8IUF8 465 aa10.63□□□□□ -0.71
HDAC3-211ENST00000491581 SHCBP1Q8NEM2 672 aa10.63□□□□□ -0.71
HDAC3-211ENST00000491581 FGD4Q96M96 766 aa10.63□□□□□ -0.71
HDAC3-211ENST00000491581 SLF1Q9BQI6 1058 aa10.63□□□□□ -0.71
HDAC3-211ENST00000491581 GOPCQ9HD26 462 aa10.63□□□□□ -0.71
HDAC3-211ENST00000491581 HOMER2Q9NSB8 354 aa10.63□□□□□ -0.71
HDAC3-211ENST00000491581 MTMR4Q9NYA4 1195 aa10.63□□□□□ -0.71
HDAC3-211ENST00000491581 ISY1Q9ULR0 285 aaKnown RBP10.63□□□□□ -0.71
HDAC3-211ENST00000491581 LAMA3Q16787 3333 aa10.62□□□□□ -0.71
HDAC3-211ENST00000491581 FCER1AP12319 257 aa10.62□□□□□ -0.71
HDAC3-211ENST00000491581 RTP1P59025 263 aa10.62□□□□□ -0.71
HDAC3-211ENST00000491581 HAND2P61296 217 aa10.62□□□□□ -0.71
HDAC3-211ENST00000491581 NMIQ13287 307 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-211ENST00000491581 ZNF792Q3KQV3 632 aa10.62□□□□□ -0.71
HDAC3-211ENST00000491581 TRIM60Q495X7 471 aa10.62□□□□□ -0.71
HDAC3-211ENST00000491581 OLFML2BQ68BL8 750 aa10.62□□□□□ -0.71
HDAC3-211ENST00000491581 KCTD1Q719H9 257 aa10.62□□□□□ -0.71
HDAC3-211ENST00000491581 TRMT44Q8IYL2 757 aaKnown RBP10.62□□□□□ -0.71
HDAC3-211ENST00000491581 ZNF444Q8N0Y2 327 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-211ENST00000491581 NAPBQ9H115 298 aa10.62□□□□□ -0.71
HDAC3-211ENST00000491581 MROH8Q9H579 483 aa10.62□□□□□ -0.71
HDAC3-211ENST00000491581 SH2D4AQ9H788 454 aa10.62□□□□□ -0.71
HDAC3-211ENST00000491581 NYAP2Q9P242 653 aa10.62□□□□□ -0.71
HDAC3-211ENST00000491581 ATP11BQ9Y2G3 1177 aa10.62□□□□□ -0.71
HDAC3-211ENST00000491581 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.62□□□□□ -0.71
HDAC3-211ENST00000491581 HAX1O00165 279 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 SNAI1O95863 264 aaPredicted RBP10.61□□□□□ -0.71
HDAC3-211ENST00000491581 ZFYP08048 801 aaPredicted RBP10.61□□□□□ -0.71
HDAC3-211ENST00000491581 ZNF865P0CJ78 1059 aaPredicted RBP10.61□□□□□ -0.71
HDAC3-211ENST00000491581 TSPY3P0CV98 308 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 TSPY8P0CW00 308 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 MCCP23508 829 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 ITGB8P26012 769 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 CNTN2Q02246 1040 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 LRRC41Q15345 812 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 SLFN13Q68D06 897 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 TTBK2Q6IQ55 1244 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 GIMAP6Q6P9H5 292 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 MB21D1Q8N884 522 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 NEDD1Q8NHV4 660 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 AGBL1Q96MI9 1066 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 UBE2OQ9C0C9 1292 aaKnown RBP10.61□□□□□ -0.71
HDAC3-211ENST00000491581 IL25Q9H293 177 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 LAMA4Q16363 1823 aa10.61□□□□□ -0.71
HDAC3-211ENST00000491581 ASTN1O14525 1302 aa10.6□□□□□ -0.71
HDAC3-211ENST00000491581 ZNF536O15090 1300 aa10.6□□□□□ -0.71
HDAC3-211ENST00000491581 TMEM232C9JQI7 657 aa10.6□□□□□ -0.71
HDAC3-211ENST00000491581 DNM1LO00429 736 aa10.6□□□□□ -0.71
HDAC3-211ENST00000491581 ERC2O15083 957 aa10.6□□□□□ -0.71
HDAC3-211ENST00000491581 SEPT4O43236 478 aa10.6□□□□□ -0.71
HDAC3-211ENST00000491581 STRNO43815 780 aa10.6□□□□□ -0.71
HDAC3-211ENST00000491581 SLC16A2P36021 539 aa10.6□□□□□ -0.71
HDAC3-211ENST00000491581 MUM1L1Q5H9M0 696 aa10.6□□□□□ -0.71
HDAC3-211ENST00000491581 RRP12Q5JTH9 1297 aaKnown RBP10.6□□□□□ -0.71
HDAC3-211ENST00000491581 CCDC174Q6PII3 467 aa10.6□□□□□ -0.71
HDAC3-211ENST00000491581 SLC39A5Q6ZMH5 540 aa10.6□□□□□ -0.71
HDAC3-211ENST00000491581 RILPL2Q969X0 211 aa10.6□□□□□ -0.71
HDAC3-211ENST00000491581 TINF2Q9BSI4 451 aa10.6□□□□□ -0.71
HDAC3-211ENST00000491581 CPVLQ9H3G5 476 aa10.6□□□□□ -0.71
HDAC3-211ENST00000491581 PRDM5Q9NQX1 630 aaPredicted RBP10.6□□□□□ -0.71
HDAC3-211ENST00000491581 FRMPD2Q68DX3 1309 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-211ENST00000491581 DNAJC25-GNG10A0A024R161 153 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-211ENST00000491581 TRIM43BA6NCK2 446 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 SLC25A27O95847 323 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 TTLL1O95922 423 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 BMP3P12645 472 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 GNAT2P19087 354 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 EPHB4P54760 987 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 HDAC1Q13547 482 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-211ENST00000491581 KCTD2Q14681 263 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 C9orf50Q5SZB4 431 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 TBC1D10CQ8IV04 446 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 PPP1R13LQ8WUF5 828 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 MKL1Q969V6 931 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 TRIM43Q96BQ3 446 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-211ENST00000491581 FAM161BQ96MY7 647 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 ZKSCAN3Q9BRR0 538 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 SLC38A10Q9HBR0 1119 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 XPNPEP3Q9NQH7 507 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 ZHX1Q9UKY1 873 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-211ENST00000491581 STX8Q9UNK0 236 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 PLIN4Q96Q06 1357 aa10.59□□□□□ -0.71
HDAC3-211ENST00000491581 SOWAHBA6NEL2 793 aa10.58□□□□□ -0.72
HDAC3-211ENST00000491581 TSPY2A6NKD2 308 aa10.58□□□□□ -0.72
HDAC3-211ENST00000491581 TRIM6-TRIM34B2RNG4 842 aa10.58□□□□□ -0.72
HDAC3-211ENST00000491581 RANBP6O60518 1105 aaKnown RBP10.58□□□□□ -0.72
HDAC3-211ENST00000491581 FGAP02671 866 aa10.58□□□□□ -0.72
HDAC3-211ENST00000491581 BMP8BP34820 402 aa10.58□□□□□ -0.72
HDAC3-211ENST00000491581 PLEKHM2Q8IWE5 1019 aa10.58□□□□□ -0.72
HDAC3-211ENST00000491581 TDHQ8IZJ6 230 aa10.58□□□□□ -0.72
HDAC3-211ENST00000491581 ABRAQ8N0Z2 381 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms