RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 IMMTQ16891 758 aaKnown RBP16.07■□□□□ 0.16
CDK9-204ENST00000491521 CREB3L3Q68CJ9 461 aa16.07■□□□□ 0.16
CDK9-204ENST00000491521 C7orf61Q8IZ16 206 aa16.07■□□□□ 0.16
CDK9-204ENST00000491521 SHCBP1Q8NEM2 672 aa16.07■□□□□ 0.16
CDK9-204ENST00000491521 MROH8Q9H579 483 aa16.07■□□□□ 0.16
CDK9-204ENST00000491521 C11orf49Q9H6J7 331 aa16.07■□□□□ 0.16
CDK9-204ENST00000491521 OGDHLQ9ULD0 1010 aa16.07■□□□□ 0.16
CDK9-204ENST00000491521 PPP1R9AQ9ULJ8 1098 aa16.07■□□□□ 0.16
CDK9-204ENST00000491521 ZNFX1Q9P2E3 1918 aaKnown RBP16.07■□□□□ 0.16
CDK9-204ENST00000491521 IGKV6D-41A0A0C4DH26 115 aa16.06■□□□□ 0.16
CDK9-204ENST00000491521 VWA5AO00534 786 aa16.06■□□□□ 0.16
CDK9-204ENST00000491521 SLC27A2O14975 620 aa16.06■□□□□ 0.16
CDK9-204ENST00000491521 STRNO43815 780 aa16.06■□□□□ 0.16
CDK9-204ENST00000491521 COBLO75128 1261 aa16.06■□□□□ 0.16
CDK9-204ENST00000491521 HSPA4P34932 840 aa16.06■□□□□ 0.16
CDK9-204ENST00000491521 HAND2P61296 217 aa16.06■□□□□ 0.16
CDK9-204ENST00000491521 NECTIN1Q15223 517 aa16.06■□□□□ 0.16
CDK9-204ENST00000491521 ANKLE1Q8NAG6 615 aa16.06■□□□□ 0.16
CDK9-204ENST00000491521 MMP19Q99542 508 aa16.06■□□□□ 0.16
CDK9-204ENST00000491521 SLF1Q9BQI6 1058 aa16.06■□□□□ 0.16
CDK9-204ENST00000491521 NBPF3Q9H094 633 aa16.06■□□□□ 0.16
CDK9-204ENST00000491521 MTMR4Q9NYA4 1195 aa16.06■□□□□ 0.16
CDK9-204ENST00000491521 PCDH10Q9P2E7 1040 aa16.06■□□□□ 0.16
CDK9-204ENST00000491521 CTDP1Q9Y5B0 961 aaPredicted RBP16.06■□□□□ 0.16
CDK9-204ENST00000491521 FRMPD3Q5JV73 1810 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 SLC25A27O95847 323 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 TTLL1O95922 423 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 PGK2P07205 417 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 HOXC6P09630 235 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 FCER1AP12319 257 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 CAPN2P17655 700 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 STAT3P40763 770 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
CDK9-204ENST00000491521 ANO1Q5XXA6 986 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 LHX8Q68G74 356 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 TRPV1Q8NER1 839 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 KIFC2Q96AC6 838 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 TOMM22Q9NS69 142 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 MTMR7Q9Y216 660 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 ZNF236Q9UL36 1845 aa16.05■□□□□ 0.16
CDK9-204ENST00000491521 TSPY2A6NKD2 308 aa16.04■□□□□ 0.16
CDK9-204ENST00000491521 RANBP6O60518 1105 aaKnown RBP16.04■□□□□ 0.16
CDK9-204ENST00000491521 MYCNP04198 464 aaPredicted RBP16.04■□□□□ 0.16
CDK9-204ENST00000491521 SLFN13Q68D06 897 aa16.04■□□□□ 0.16
CDK9-204ENST00000491521 CPXCR1Q8N123 301 aa16.04■□□□□ 0.16
CDK9-204ENST00000491521 NEDD1Q8NHV4 660 aa16.04■□□□□ 0.16
CDK9-204ENST00000491521 TBC1D32Q96NH3 1257 aa16.04■□□□□ 0.16
CDK9-204ENST00000491521 SLC5A4Q9NY91 659 aa16.04■□□□□ 0.16
CDK9-204ENST00000491521 ZMYND8Q9ULU4 1186 aaPredicted RBP16.04■□□□□ 0.16
CDK9-204ENST00000491521 ADAMTS5Q9UNA0 930 aa16.04■□□□□ 0.16
CDK9-204ENST00000491521 NMT2O60551 498 aa16.03■□□□□ 0.16
CDK9-204ENST00000491521 CYP21A2P08686 494 aa16.03■□□□□ 0.16
CDK9-204ENST00000491521 RBM25P49756 843 aaKnown RBP16.03■□□□□ 0.16
CDK9-204ENST00000491521 IKQ13123 557 aaPredicted RBP16.03■□□□□ 0.16
CDK9-204ENST00000491521 KCTD2Q14681 263 aa16.03■□□□□ 0.16
CDK9-204ENST00000491521 RRP12Q5JTH9 1297 aaKnown RBP16.03■□□□□ 0.16
CDK9-204ENST00000491521 PRAMEF19Q5SWL8 479 aa16.03■□□□□ 0.16
CDK9-204ENST00000491521 SNRNP48Q6IEG0 339 aaKnown RBP16.03■□□□□ 0.16
CDK9-204ENST00000491521 RIOX2Q8IUF8 465 aa16.03■□□□□ 0.16
CDK9-204ENST00000491521 DDX20Q9UHI6 824 aaKnown RBP16.03■□□□□ 0.16
CDK9-204ENST00000491521 ZNF214Q9UL59 606 aaPredicted RBP16.03■□□□□ 0.16
CDK9-204ENST00000491521 SNX14Q9Y5W7 946 aa16.03■□□□□ 0.16
CDK9-204ENST00000491521 PLXNA1Q9UIW2 1896 aa16.03■□□□□ 0.16
CDK9-204ENST00000491521 PFASO15067 1338 aa16.02■□□□□ 0.16
CDK9-204ENST00000491521 ZMYM6O95789 1325 aa16.02■□□□□ 0.16
CDK9-204ENST00000491521 ZBED4O75132 1171 aa16.02■□□□□ 0.16
CDK9-204ENST00000491521 OLFML2BQ68BL8 750 aa16.02■□□□□ 0.16
CDK9-204ENST00000491521 RASEFQ8IZ41 740 aa16.02■□□□□ 0.16
CDK9-204ENST00000491521 ABRAQ8N0Z2 381 aa16.02■□□□□ 0.16
CDK9-204ENST00000491521 PRPF38AQ8NAV1 312 aaKnown RBP16.02■□□□□ 0.16
CDK9-204ENST00000491521 REPS2Q8NFH8 660 aa16.02■□□□□ 0.16
CDK9-204ENST00000491521 RAVER2Q9HCJ3 691 aaKnown RBP16.02■□□□□ 0.16
CDK9-204ENST00000491521 RBM27Q9P2N5 1060 aaKnown RBP16.02■□□□□ 0.16
CDK9-204ENST00000491521 STX8Q9UNK0 236 aa16.02■□□□□ 0.16
CDK9-204ENST00000491521 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.02■□□□□ 0.16
CDK9-204ENST00000491521 TACC3Q9Y6A5 838 aa16.02■□□□□ 0.16
CDK9-204ENST00000491521 PLIN4Q96Q06 1357 aa16.01■□□□□ 0.15
CDK9-204ENST00000491521 BMP3P12645 472 aa16.01■□□□□ 0.15
CDK9-204ENST00000491521 CYBAP13498 195 aa16.01■□□□□ 0.15
CDK9-204ENST00000491521 SYN1P17600 705 aa16.01■□□□□ 0.15
CDK9-204ENST00000491521 ANAPC15P60006 121 aa16.01■□□□□ 0.15
CDK9-204ENST00000491521 KRT32Q14532 448 aa16.01■□□□□ 0.15
CDK9-204ENST00000491521 GMCL1P1Q8NEA9 526 aa16.01■□□□□ 0.15
CDK9-204ENST00000491521 MKL1Q969V6 931 aa16.01■□□□□ 0.15
CDK9-204ENST00000491521 MAML3Q96JK9 1138 aa16.01■□□□□ 0.15
CDK9-204ENST00000491521 TEX13BQ9BXU2 312 aa16.01■□□□□ 0.15
CDK9-204ENST00000491521 FEM1BQ9UK73 627 aa16.01■□□□□ 0.15
CDK9-204ENST00000491521 TMEM232C9JQI7 657 aa16■□□□□ 0.15
CDK9-204ENST00000491521 E7EWF7 191 aa16■□□□□ 0.15
CDK9-204ENST00000491521 TRDNQ13061 729 aa16■□□□□ 0.15
CDK9-204ENST00000491521 MFSD6Q6ZSS7 791 aa16■□□□□ 0.15
CDK9-204ENST00000491521 RASGRP2Q7LDG7 609 aa16■□□□□ 0.15
CDK9-204ENST00000491521 KCNB2Q92953 911 aa16■□□□□ 0.15
CDK9-204ENST00000491521 JAKMIP1Q96N16 626 aaKnown RBP16■□□□□ 0.15
CDK9-204ENST00000491521 SENP6Q9GZR1 1112 aaPredicted RBP16■□□□□ 0.15
CDK9-204ENST00000491521 HOMER2Q9NSB8 354 aa16■□□□□ 0.15
CDK9-204ENST00000491521 ANAPC4Q9UJX5 808 aa16■□□□□ 0.15
CDK9-204ENST00000491521 RIPK3Q9Y572 518 aa16■□□□□ 0.15
CDK9-204ENST00000491521 TAF6LQ9Y6J9 622 aa16■□□□□ 0.15
CDK9-204ENST00000491521 MSCO60682 206 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms