RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 ANO1Q5XXA6 986 aa13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 SASS6Q6UVJ0 657 aa13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 ANKS1AQ92625 1134 aa13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 TRIM47Q96LD4 638 aa13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 FOXP1Q9H334 677 aaPredicted RBP13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 SEMA6BQ9H3T3 888 aa13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 MORC2Q9Y6X9 1032 aaPredicted RBP13.76□□□□□ -0.21
SRGAP3-210ENST00000491467 MROH7-TTC4A0A0A0MT08 1334 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 G3V3G9 751 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 RANBP6O60518 1105 aaKnown RBP13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 USP5P45974 858 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 ME1P48163 572 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 NBPF9Q3BBW0 867 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 DCAF8Q5TAQ9 597 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 C12orf60Q5U649 245 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 DGKHQ86XP1 1220 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 FAM177A1Q8N128 213 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 TBC1D16Q8TBP0 767 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 ADAMTS19Q8TE59 1207 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 MRPS27Q92552 414 aaKnown RBP13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 UHRF1Q96T88 793 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 SLC26A6Q9BXS9 759 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 COA1Q9GZY4 146 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 SENP2Q9HC62 589 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 TCP11L1Q9NUJ3 509 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 CCDC39Q9UFE4 941 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 PSME4Q14997 1843 aa13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 DDX60LQ5H9U9 1706 aaKnown RBP13.75□□□□□ -0.21
SRGAP3-210ENST00000491467 GPR75-ASB3A0A0A6YYF3 556 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 KINO60870 393 aaKnown RBP13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 NR1I2O75469 434 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 MMP1P03956 469 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 USP17L8P0C7I0 530 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 CMA1P23946 247 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 FOSBP53539 338 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 LACTBP83111 547 aaPredicted RBP13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 NECAB2Q7Z6G3 386 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 ENAHQ8N8S7 591 aaPredicted RBP13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 AGBL3Q8NEM8 1001 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 ENGASEQ8NFI3 743 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 FAM200AQ8TCP9 573 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 TIGD1Q96MW7 591 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 LRFN3Q9BTN0 628 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 UNC93B1Q9H1C4 597 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 PCDHA7Q9UN72 937 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 TCF20Q9UGU0 1960 aaKnown RBP13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 SSC5DA1L4H1 1573 aa13.74□□□□□ -0.21
SRGAP3-210ENST00000491467 TESPA1A2RU30 521 aaPredicted RBP13.73□□□□□ -0.21
SRGAP3-210ENST00000491467 ESPNB1AK53 854 aa13.73□□□□□ -0.21
SRGAP3-210ENST00000491467 POLR3DP05423 398 aaPredicted RBP13.73□□□□□ -0.21
SRGAP3-210ENST00000491467 GNAQP50148 359 aa13.73□□□□□ -0.21
SRGAP3-210ENST00000491467 CEBPZQ03701 1054 aaKnown RBP13.73□□□□□ -0.21
SRGAP3-210ENST00000491467 TYRO3Q06418 890 aa13.73□□□□□ -0.21
SRGAP3-210ENST00000491467 RILPL1Q5EBL4 403 aa13.73□□□□□ -0.21
SRGAP3-210ENST00000491467 RAB11FIP4Q86YS3 637 aa13.73□□□□□ -0.21
SRGAP3-210ENST00000491467 PHKBQ93100 1093 aa13.73□□□□□ -0.21
SRGAP3-210ENST00000491467 ZKSCAN3Q9BRR0 538 aa13.73□□□□□ -0.21
SRGAP3-210ENST00000491467 MCM9Q9NXL9 1143 aa13.73□□□□□ -0.21
SRGAP3-210ENST00000491467 CEP131Q9UPN4 1083 aa13.73□□□□□ -0.21
SRGAP3-210ENST00000491467 WDHD1O75717 1129 aaPredicted RBP13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 TPM3P06753 285 aa13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 RXRAP19793 462 aa13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 KIF5BP33176 963 aa13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 TROAPQ12815 778 aa13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 SNW1Q13573 536 aaKnown RBP13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 RSBN1LQ6PCB5 846 aaPredicted RBP13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 ZSCAN30Q86W11 494 aa13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 ELOA2Q8IYF1 753 aaPredicted RBP13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 FSIP1Q8NA03 581 aa13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 RNF214Q8ND24 703 aa13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 CTCFLQ8NI51 663 aaPredicted RBP13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 NUP133Q8WUM0 1156 aa13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 EYA3Q99504 573 aa13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 TAOK2Q9UL54 1235 aa13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 CLIC4Q9Y696 253 aa13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 BDP1A6H8Y1 2624 aa13.72□□□□□ -0.21
SRGAP3-210ENST00000491467 GAKO14976 1311 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 FAM237AA0A1B0GTK4 181 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 TSPY2A6NKD2 308 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 KIF28PB7ZC32 967 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 CUTAO60888 179 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 BMP15O95972 392 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 HOXD10P28358 340 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 CLCN1P35523 988 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 GJA5P36382 358 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 NOSTRINQ8IVI9 506 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 CCDC144CPQ8IYA2 1237 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 FMR1NBQ8N0W7 255 aaPredicted RBP13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 ZNF444Q8N0Y2 327 aaPredicted RBP13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 MYL10Q9BUA6 226 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 ZC3H12CQ9C0D7 883 aaKnown RBP13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 BRMS1Q9HCU9 246 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 POLLQ9UGP5 575 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 SRRDQ9UH36 339 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 MRVI1Q9Y6F6 885 aa13.71□□□□□ -0.21
SRGAP3-210ENST00000491467 NCOR1O75376 2440 aa13.71□□□□□ -0.22
SRGAP3-210ENST00000491467 MUC6Q6W4X9 2439 aa13.7□□□□□ -0.22
SRGAP3-210ENST00000491467 COL2A1P02458 1487 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms